These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2872#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1123 fasta sequence [AACTGAAAACCTTCGTGTTTGAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTCGTCAAT---AAAATCTGAACGAGTGGTGAAGGAGCAATTTCTCGCT---TCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT-CTCGTTCACGTTACCAAA-GGGG-AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT-GTCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGGAGTGGGGGAGAAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCATGGTTGATAAATAAATGGGCTCTA] [+] EMBL CA847283 [AACTGAAAACCTTCGTGTTTGAGTCTGATCATCCTTCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAG ] [+] EMBL CA844557 [ AAAACCTTCGTGTTTGAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTCGCTCGTGCCGAATTCGGCACGAGTGGTGCTGTAGCAATTTCTCGCT TCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGC ] [+] EMBL CA844476 [ AAAACCTTCGTGTTCGAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGG ] [+] EMBL CA847212 [ AAAACCTTCGTGTTTGAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTG ] [+] EMBL CA847183 [ TCGTGTTTGAGTCTGATCATCACCCTTCTCATCATC CCTTGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTC ] [+] EMBL CA847179 [ TCGTGTTTGAGTCTGATCATCACCCTTCTCATC CCTCCATGGGTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGTGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTC ] [+] EMBL FR0057177 [ GAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACATATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTCGTCAAT AAAATCTGAAt ] [+] EMBL FR0057245 [ caCCTCACCCTTCTCATCAAAAACATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGGAAACTTGTACATCATCAGAAGTGGGACGGAAAGGAAACTACAATCGAACGAGAGATTCAGGATGGGAAAC ] [+] EMBL FR0057336 [ ATCACCCTTCTCATCATCACCATGGTTGAGCAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACAATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTCAGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAGATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAGACCGTCGTCACCTTTGAGAACGGCAAACTTGTGCAACATCAGAAGTGGGACGGGAAGGAAACTACAATCGAACGAGAGATTCAAGATGGGAAAC ] [+] EMBL CA341143 [ TCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGATGTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTCGTCAAT AAAATCTGAA TTGTGAAa ] [+] EMBL CA844558 [ GAACGAGGGACTTGGTGCTGTAGCAATCTGAACCTCCTTGTAATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGTAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGGAGTGGGGGAGAAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGG ] [+] EMBL CA844643 [ GCAATTTCTCGCT TCAGTCTGAACCTGTCTGTTATCCGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGGAGTGGGGGAGAAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCATGGTTGATA ] [+] EMBL FR0057308 [ GTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCC ] [+] EMBL FR0057213 [ TCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCCACCCATCCATGCCACTCATCTACCGTTATAG ] [+] EMBL FR0057457 [ TCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAAGGGGG AAGAGCTGTATACGCGCAAACACGTTACATCGCAGGAGAACCTGGTCTACCCATCCAGG ] [+] EMBL FR0057217 [ cCCCACATGATGGTCCTATGGATTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCTAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CCCGTTCACGTTTCCATA GGGG A ] [+] EMBL FR0057384 [ AATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACG ] [+] EMBL FR0057362 [ TGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCTCCTCGTTCACGTTACCAAA GGGGAAAGAGCTGTATACGCGCAGACACGTTACATCCCAGGAGATC ] [+] EMBL CA846501 [ CTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCC ] [+] EMBL CA844540 [ CTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGGAGTGGGGGAGAAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCATGGTTGAT ] [+] EMBL CA846556 [ TTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAAGGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGT ] [+] EMBL FR0057228 [ GGGGCCAGAGTTTTGTTGGAAAAACAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGCT CTCGTTCACGTTACCAAA GGGG AAGAGCTGTATACGCGCAAACACGTTACATCCCAGGAGATCCT GTCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGGAGTGGGGGAGAAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGGATGTTTTGGTATTCATGGTTGATAA ] [+] EMBL CA844538 [ ATAATGAAGATCAAGCGCTCGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCT CTCGTTCACGTTACCAAG GGGG AAGAGCTGTATACGCGCAAACACGCTACATCCCAGGAGATCCT GTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGAGTGTGGGAGAA GCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCGTGGTTGATAAATAAATGGGCTCTA] consensusID : consensus_2872#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 581 fasta sequence [GAAGCAATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG-CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCATTATAGCCAAAGGAGTGGGGGAGAAGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCGTGGTTGATA] [+] EMBL CA844493 [GAAGCAATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCTTTTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCT ] [+] EMBL CA846565 [ AGCAATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCATTATAGCCAAAGGAGTGGGGGAGAAGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGACTGTTTTGGTATTCGTGGTTGATA] [+] EMBL CA846519 [ AGCAATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATC ] [+] EMBL CA846407 [ ATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGAGTGTGGGAGAAGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCGTGG ] [+] EMBL FR0057199 [ CCTGTCTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAGACACGCTACATCNCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGAGTGTGGGAGAAGCTG ] [+] EMBL FR0057348 [ CTGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCATTATA ] [+] EMBL FR0057324 [ TGTTATCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCATTATAGCCAAAGGAGTGGGGGAGAAGCTGATCCTTCAAAGAAAGGAGGCT ] [+] EMBL FR0057226 [ GCGACCTGCTTGAGCCAAAATAGTGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGNAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAAT ] [+] EMBL FR0057313 [ TTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGGCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGGAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAATGAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACGCCGCATACACGCTACATCTCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCATTATAGCCAAAGGAGTGGGG ] [+] EMBL CA844634 [ CCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAATGAAGATTTTTTTTCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGCTCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACG CGCAAACACGCTACATCCCAGGAGATCCTGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGAGTGTGGGAGAAGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATGTTTTGGTATTCGTGGTTG ] consensusID : consensus_2872#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 372 fasta sequence [TCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGGGGAAGAGCTGTATACGCGCAAACACGCTACATCCCAGGAGATCCTGGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGGAGTGTGGGAGAAGCTGATCCTTCAAA] [+] EMBL FR0057462 [TCTGCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGCATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAAGGCAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTGGCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGTCAGAGTTTTGTTGGAAATCCAGAATATGGTGGGGAAGAGCTGTATACGCGCAAACACGCTACATCCCAGGAGATCCTGGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGGAGTGTGGGAGAAGCTGATCCTTCAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 AACTGAAAACCTTCGTGTTTGAGTCTGATCATCACCCTTCTCATCATCACCATGGTTGAG 60 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 CAGTTTGTGGGCAACTGGACTCTGGTTTCCAGCGATAACTTTGATGACTACATGAAGACA 120 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 ATCGGTGTGAACTTTGCAACCAGGCAAATGGGCAACATGGTGAAGCCCAACCTGGTGTTC 180 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 AGCATGGGCGATGATGGCTTCATATCCATGAAGTCTGAGAGCACTTTCAAAACTACAGAG 240 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 ATCAAGTTCAAGCTGACCGAAGAGTTCGAGGAGACTACTGCGGATGGCCGGAACACCAAG 300 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 ACCGTCGTCACCTTTGAGAACGGCAAACTTGTACAACATCAGAAGTGGGACGGAAAGGAA 360 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 ACTACAATCGAACGAGAGATTCAAGATGGAAAACTCACCGCTAAATGCATCGCAGATGAT 420 consensus_2872#1 ------------------------------------------------------------ consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 GTTGTGGCACTGAGGACCTATGAGAGAGTTTGATCTTTTCAGTCTTCTGTCTCGTCAATA 480 consensus_2872#1 --------------------GAAGCAATTTCTTGCTTCAGTCTGAACCTGTCTGTTATCT 40 consensus_2872#2 ---------------------------------------------------------TCT 3 consensus_2872#0 AAATCTGAACGAGTGGTGAAGGAGCAATTTCTCGCTTCAGTCTGAACCTGTCTGTTATCT 540 *** consensus_2872#1 GCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGC 100 consensus_2872#2 GCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGC 63 consensus_2872#0 GCTTGAGCCAAAATGATGGTCCTATGGCTTTCATTTCTACTGATTGGATGTGTTGGCAGC 600 ************************************************************ consensus_2872#1 ATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAA 160 consensus_2872#2 ATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTTCAGGAAATCTGCCAAGTTCCCAA 123 consensus_2872#0 ATTCCTGTGCAGAAAGGTGTTCTACCTTACTGGAGTCCAGGAAATCTGGCAAGTTCCCAA 660 ************************************ *********** *********** consensus_2872#1 GGCAGTG------------------TCCTGAAGCCAAACTATGAATCTGCTGAACGTTTG 202 consensus_2872#2 GGCAGTG------------------TCCTGAAGCCAAACTATGAATCTGCTGAACGTTTG 165 consensus_2872#0 GGCAGTGGGCCACACCATCAAAGTGTCCTGAAGCCAAACTATGAATCTGCTGAACGTTTG 720 ******* *********************************** consensus_2872#1 GCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGT 262 consensus_2872#2 GCTCAAAATGCAGCCTCCAGAGCTGATCACTACAAAAGCCCACAGTCTGCTTATTGGGGT 225 consensus_2872#0 GCTCAAAATGCAGCCTCCAGAGCTGATCACTATAAAAGCCCACAGTCTGCTTATTGGGGT 780 ******************************** *************************** consensus_2872#1 CAGAGTTTTGTTGGAAATCCAGAATATGGTGTAAAGTATCCACATGCACCTGGCAATAAT 322 consensus_2872#2 CAGAGTTTTGTTGGAAATCCAGAATATGGTG----------------------------- 256 consensus_2872#0 CAGAGTTTTGTTGGAAATCCAGAATATGGTGTCAAGTATCCACATGCACCTGGCAATAAT 840 ******************************* consensus_2872#1 GAAGATCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCCGC 382 consensus_2872#2 ------------------------------------------------------------ consensus_2872#0 GAAGCTCAAGCGCCAGTCTTCACAGACGTGTCTGCTCTGACACCAGTCTACGCTTCCAGC 900 consensus_2872#1 TCTCGTTCACGTTACCAAGGGGGAAGAGCTGTATACGCGCAAACACGCTACATCCCAGGA 442 consensus_2872#2 --------------------GGGAAGAGCTGTATACGCGCAAACACGCTACATCCCAGGA 296 consensus_2872#0 TCTCGTTCACGTTACCAAAGGGGAAGAGCTGTATACGCGCAAACACGTTACATCCCAGGA 960 *************************** ************ consensus_2872#1 GATCCTG-TCTACCCATCCGTGCCACTCATCTACCATTATAGCCAAAGG-AGTGGGGGAG 500 consensus_2872#2 GATCCTGGTCTACCCATCCGTGCCACTCATCTACCGTTATAGCCAAAGGGAGTGTGGGAG 356 consensus_2872#0 GATCCTG-TCTACCCATCCATGCCACTCATCTACCGTTATAGCCAAAGG-AGTGGGGGAG 1018 ******* *********** *************** ************* **** ***** consensus_2872#1 AAGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTTTCTTGAATG 560 consensus_2872#2 AAGCTGATCCTTCAAA-------------------------------------------- 372 consensus_2872#0 AAACTGCTCCTGCTGATCCTTCAAAGAAAGGAGGCTTATAGTTGCAATGTAATGGCTGTT 1078 ** *** **** * * consensus_2872#1 TTTTGGTATTCGTGGTTGATA------------------------ 581 consensus_2872#2 --------------------------------------------- consensus_2872#0 TCTTGAATGTTTTGGTATTCATGGTTGATAAATAAATGGGCTCTA 1123 |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |