These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_574#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence [GAGCTAATACTTAGCAACAGTCAACGCGAAATGCCTTTTAAACTCATTAACAAGCACAATTAAAATGCCAGAGTCTCAAAGTTCATCAGCAAGTTGGAGAATATGGTTTTGAATCTCTGCCTACCGGACTTTAACACAACAGTACATTGCAACAAGCTGTGTGCAGACGGCTATGATGTCACAAACCTTGTATCTGCTGAACCCGCTGTCCGGAGGCGAGGCTTCAAATTGGAGTACTTCCTGCGTCCGCCAGTGCAGGTGACGCTGAAGTTTGGTTTCCTGGTGGAGCTGTGCAGGCTGGATGTTGAGCTGTGGCCTTGGGGTATGGACCAAGGACAGGCCTGTAAGAGGCTGGAAATCAGCACCAGTTCAGATCGAGCTCAAGACCAGAAGAGGTTTCATAAGAATGACAGAGTAAAGATGCAGATGAGAGATCAACATCAAGACACCAGAGGAGTACGCAGCAGCAAGATGTTCCCTGGTCAGCAGTGGAGCCTTCAGGCGCAGCAGTGGGGAGACGAGGCGCTACCTGAA] [+] EMBL CA333208 [GAGCTAATACTTAGCAACAGTCAACGCGAAATGCCTTTTAAACTCATTAACAAGCACAATTAAAATGCCAGAGTCTCAAAGTTCATCAGCAAGTTGGAGAATATGGTTTTGAATCTCTGCCTACCGGACTTTAACACAACAGTACATTGCAACAAGCTGTGTGCAGACGGCTATGATGTCACAAACCTTGTATCTGCTGAACCCGCTGTCCGGAGGCGAGGCTTCAAATTGGAGTACTTCCTGCGTCCGCCAGTGCAGGTGACGCTGAAGTTTGGTTTCCTGGTGGAGCTGTGCAGGCTGGATGTTGAGCTGTGGCCTTGGGGTATGGACCAAGGACAGGCCTGTAAGAGGCTGGAAATCAGCACCAGTTCAGATCGAGCTCAAGACCAGAAGAGGTTTCATAAGAATGACAGAGTAAAGATGCAGATGAGAGATCAACATCAAGACACCAGAGGAGTACGCAGCAGCAAGATGTTCCCTGGTCAGCAGTGGAGCCTTCAGGCGCAGCAGTGGGGAGACGAGGCGCTACCTGAA] consensusID : consensus_574#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 247 fasta sequence [TTCAGGCGGCAGCAGTGGGGAGACGAGGCGCTACCTGAACCTCAGCAGGTGACCAGCGCATCCTTGAAGACTGAGTCCAGCTCCTCTGAAGCACAGTTTAAACTGGGAGGTCGGTGTGAACTTCGAGAGGACACCCGAGGCTCTCTCTCCAATNTAAGGTACGGCCCACGGCCCCCGGTCCCCGGTGGCGCCTCCTCCGCACCCCGGTTGGCTGGCGGGAGGGGGGGACTGTGGAGCCCGGGGACCC] [+] EMBL FR0060586 [TTCAGGCGGCAGCAGTGGGGAGACGAGGCGCTACCTGAACCTCAGCAGGTGACCAGCGCATCCTTGAAGACTGAGTCCAGCTCCTCTGAAGCACAGTTTAAACTGGGAGGTCGGTGTGAACTTCGAGAGGACACCCGAGGCTCTCTCTCCAATNTAAGGTACGGCCCACGGCCCCCGGTCCCCGGTGGCGCCTCCTCCGCACCCCGGTTGGCTGGCGGGAGGGGGGGACTGTGGAGCCCGGGGACCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_574#0 GAGCTAATACTTAGCAACAGTCAACGCGAAATGCCTTTTAAACTCATTAACAAGCACAAT 60 consensus_574#1 ------------------------------------------------------------ consensus_574#0 TAAAATGCCAGAGTCTCAAAGTTCATCAGCAAGTTGGAGAATATGGTTTTGAATCTCTGC 120 consensus_574#1 --------------TTCAGGCGGCAGCAGTGGGGAGACGAGGCGCTACCTGAACCTCAGC 46 *** ** *** * * ** **** *** ** consensus_574#0 CTACCGGACTTTAACACAACAGTACATTGCAACAAGCTGTGTGCAGACGGCTATGATGTC 180 consensus_574#1 AGGT--GACCAGCGCATCCTTGAAGACTGAGTCCAGCTCCTCTGAAGCACAGTTTAAACT 104 *** ** * * * ** * **** * * * * consensus_574#0 ACAAACCTTGTATCTGCTG-AACCCGCTGTCCGGAGGCGAGGCTTCAAATTGGAGTACTT 239 consensus_574#1 GGGAGGTCGGTGTGAACTTCGAGAGGACACCCGAGGCTCTCTCTCCAATNTAAGGTACGG 164 * ** * ** * * *** * ** *** * **** consensus_574#0 CCTGCGTCCGCCAGTGCA-GGTGACGCTGAAGTTTGGTTTCCTGGTGGAGCTGTGCAGGC 298 consensus_574#1 CCCACGGCCCCCGGTCCCCGGTGGCGCCT--CCTCCGCACCCCGGTTGGCTGGCGGGAGG 222 ** ** ** ** ** * **** *** * * ** *** * * * * consensus_574#0 TGGATGTTGAGCTGTGGCCTTGGGGTATGGACCAAGGACAGGCCTGTAAGAGGCTGGAAA 358 consensus_574#1 GGGGGACTG---TGGAGCCCGGGGACCC-------------------------------- 247 ** ** ** *** *** consensus_574#0 TCAGCACCAGTTCAGATCGAGCTCAAGACCAGAAGAGGTTTCATAAGAATGACAGAGTAA 418 consensus_574#1 ------------------------------------------------------------ consensus_574#0 AGATGCAGATGAGAGATCAACATCAAGACACCAGAGGAGTACGCAGCAGCAAGATGTTCC 478 consensus_574#1 ------------------------------------------------------------ consensus_574#0 CTGGTCAGCAGTGGAGCCTTCAGGCGCAGCAGTGGGGAGACGAGGCGCTACCTGAA 534 consensus_574#1 -------------------------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |