GLOGS: A method for using covariates to improve power in GWAS with related individuals
Stephen A. Stanhope
University of Chicago, Biological Sciences Division
Page build date: April 19, 2011
sstanhop@bsd.uchicago.edu
This page is to provide codes that accompany "GLOGS: A method for using covariates to improve power in GWAS with related individuals,"
Stephen A. Stanhope and Mark Abney (2011). They are to be considered research codes and anticipate reasonable proficiency in C, MPI and R.
Please do contact the author with any questions.
glogs_oct172011.tar.gz - This archive contains the full GLOGS package as of Oct 17 2011, and example data analyses with complete walkthroughs.
glogs_oct172011.tar.gz
Updates:
Aug. 8 2011: Corrected an error in the matrix inversion routines that prevented 3 covariate analyses from being performed.
Aug. 11 2011: Substantially revised the main Read.Me file for completeness and clarity.
Oct. 17 2011: Parallelized the cubature transformation code.