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tjod |
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#define EXTERN extern |
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#include "pcwin.h" |
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#include "pcmod.h" |
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#include "angles.h" |
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#include "torsions.h" |
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#include "rings.h" |
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int isbond(int, int); |
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int isangle(int,int); |
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int is_ring31(int); |
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int is_ring41(int); |
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int is_ring42(int,int); |
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int is_ring43(int, int, int); |
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int is_ring44(int *); |
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int is_ring51(int); |
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int is_ring52(int, int); |
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int is_ring53(int, int, int); |
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int is_ring54(int, int, int, int); |
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int is_ring55(int *); |
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int is_ring61(int); |
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int is_ring62(int, int); |
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int is_ring63(int,int,int); |
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int is_ring66(int *); |
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void ksort(int, int *); |
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void message_alert(char *, char *); |
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int is_cyclo6(int, int *); |
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int is_ring31(int ia) |
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{ |
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int i,j; |
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for (i=0; i < rings.nring3; i++) |
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{ |
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for (j=0; j < 3; j++) |
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{ |
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if (ia == rings.r13[i][j]) |
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{ |
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return(TRUE); |
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} |
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} |
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} |
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return FALSE; |
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} |
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/* ============================ */ |
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int is_ring41(int ia) |
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{ |
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int i,j, found; |
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found = FALSE; |
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for (i=0; i < rings.nring4; i++) |
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{ |
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for (j=0; j < 4; j++) |
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{ |
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if (ia == rings.r14[i][j]) |
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{ |
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found = TRUE; |
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return (found); |
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} |
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} |
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} |
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return (found); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring42(int ia, int ib) |
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{ |
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int i,j, k, itmp, jtmp; |
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if (ia < ib ) |
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{ |
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itmp = ia; |
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jtmp = ib; |
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}else |
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{ |
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itmp = ib; |
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jtmp = ia; |
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} |
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for (i=0; i < rings.nring4; i++) |
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{ |
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for (j = 0; j < 3; j++) |
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{ |
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if ( itmp == rings.r14[i][j]) |
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{ |
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for (k=j+1; k < 4; k++) |
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{ |
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if (jtmp == rings.r14[i][k]) |
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return(TRUE); |
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} |
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} |
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} |
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} |
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return(FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring43(int ia, int ib, int ic) |
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{ |
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int i, found; |
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int array[5]; |
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found = FALSE; |
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array[0] = ia; |
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array[1] = ib; |
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array[2] = ic; |
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ksort(3,array); |
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for (i=0; i < rings.nring4; i++) |
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{ |
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if ( array[0] == rings.r14[i][0] && rings.r14[i][1] == array[1] && rings.r14[i][2] == array[2]) |
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{ |
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found = TRUE; |
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return(found); |
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} |
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if ( rings.r14[i][0] == array[0] && rings.r14[i][1] == array[1] && rings.r14[i][3] == array[2]) |
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{ |
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found = TRUE; |
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return(found); |
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} |
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if ( rings.r14[i][0] == array[0] && rings.r14[i][2] == array[1] && rings.r14[i][3] == array[2]) |
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{ |
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found = TRUE; |
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return(found); |
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} |
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if ( rings.r14[i][1] == array[0] && rings.r14[i][2] == array[1] && rings.r14[i][3] == array[2]) |
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{ |
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found = TRUE; |
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return(found); |
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} |
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} |
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return(found); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring44(int *array) |
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{ |
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int i; |
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for (i=0; i < rings.nring4; i++) |
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{ |
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if (array[0] == rings.r14[i][0] && array[1] == rings.r14[i][1] && |
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array[2] == rings.r14[i][2] && array[3] == rings.r14[i][3]) |
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return(TRUE); |
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} |
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return FALSE; |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring51(int ia) |
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{ |
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int i,j; |
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for(i=0; i < rings.nring5; i++) |
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{ |
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for (j=0; j < 5; j++) |
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{ |
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if (rings.r15[i][j] == ia) |
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{ |
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return(TRUE); |
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} |
156 |
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} |
157 |
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} |
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return(FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring52(int ia, int ib) |
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{ |
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int i, j,k, itmp, jtmp; |
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if (ia < ib) |
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{ |
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itmp = ia; |
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jtmp = ib; |
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}else |
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{ |
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itmp = ib; |
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jtmp = ia; |
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} |
173 |
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for (i=0; i < rings.nring5; i++) |
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{ |
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for (j=0; j < 4; j++) |
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{ |
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if (itmp == rings.r15[i][j]) |
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{ |
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for (k=j+1; k < 5; k++) |
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{ |
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if (jtmp == rings.r15[i][k]) |
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return(TRUE); |
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} |
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} |
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} |
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} |
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return(FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring53(int ia, int ib, int ic) |
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{ |
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int i, j,k,l; |
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int array[5]; |
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array[0] = ia; |
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array[1] = ib; |
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array[2] = ic; |
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ksort(3,array); |
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for (i=0; i < rings.nring5; i++) |
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{ |
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for (j=0; j < 3; j++) |
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{ |
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if (array[0] == rings.r15[i][j]) |
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{ |
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for (k=j+1; k < 4; k++) |
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{ |
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if (array[1] == rings.r15[i][k]) |
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{ |
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for (l=j+1; l < 5; l++) |
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{ |
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if (array[2] == rings.r15[i][l]) |
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return(TRUE); |
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} |
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} |
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} |
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} |
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} |
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} |
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return(FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring54(int ia, int ib, int ic, int id) |
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{ |
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int i; |
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int array[5]; |
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array[0] = ia; |
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array[1] = ib; |
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array[2] = ic; |
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array[3] = id; |
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ksort(4,array); |
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for (i=0; i < rings.nring5; i++) |
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{ |
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if (array[0] == rings.r15[i][0]) |
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{ |
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if (array[1] == rings.r15[i][1]) |
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{ |
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if (array[2] == rings.r15[i][2]) |
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{ |
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if (array[3] == rings.r15[i][3]) |
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return(TRUE); |
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else if (array[3] == rings.r15[i][4]) |
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return(TRUE); |
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else |
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return(FALSE); |
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} else if (array[2] == rings.r15[i][3] && array[3] == rings.r15[i][4]) |
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return(TRUE); |
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} else if (array[1] == rings.r15[i][2] && |
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array[2] == rings.r15[i][3] && array[3] == rings.r15[i][4]) |
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return(TRUE); |
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} else if (array[0] == rings.r15[i][1] && array[1] == rings.r15[i][2] && |
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array[2] == rings.r15[i][3] && array[3] == rings.r15[i][4]) |
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return(TRUE); |
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} |
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return (FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring55(int *array) |
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{ |
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int i; |
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for(i=0; i < rings.nring5; i++) |
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{ |
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if ( array[0] == rings.r15[i][0] && array[1] == rings.r15[i][1] && array[2] == rings.r15[i][2] && |
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array[3] == rings.r15[i][3] && array[4] == rings.r15[i][4]) |
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return(TRUE); |
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} |
267 |
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return (FALSE); |
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} |
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/* -------------------------------------------------------- */ |
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int is_ring61(int ia) |
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{ |
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int i, j; |
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for(i=0; i < rings.nring6; i++) |
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{ |
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for(j=0; j < 6; j++) |
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{ |
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if (ia == rings.r16[i][j]) |
278 |
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return (TRUE); |
279 |
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} |
280 |
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} |
281 |
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return (FALSE); |
282 |
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} |
283 |
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/* -------------------------------------------------------- */ |
284 |
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int is_ring62(int ia, int ib) |
285 |
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{ |
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int i, j,k, itmp, jtmp; |
287 |
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if (ia < ib) |
288 |
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{ |
289 |
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itmp = ia; |
290 |
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jtmp = ib; |
291 |
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}else |
292 |
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{ |
293 |
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itmp = ib; |
294 |
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jtmp = ia; |
295 |
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} |
296 |
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for (i=0; i < rings.nring6; i++) |
297 |
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{ |
298 |
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for (j=0; j < 5; j++) |
299 |
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{ |
300 |
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if (itmp == rings.r16[i][j]) |
301 |
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{ |
302 |
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for (k=j+1; k < 6; k++) |
303 |
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{ |
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if (jtmp == rings.r16[i][k]) |
305 |
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return(TRUE); |
306 |
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} |
307 |
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} |
308 |
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} |
309 |
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} |
310 |
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return(FALSE); |
311 |
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} |
312 |
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/* -------------------------------------------------------- */ |
313 |
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int is_ring63(int ia, int ib, int ic) |
314 |
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{ |
315 |
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int i, j, k, l; |
316 |
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int array[5]; |
317 |
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318 |
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array[0] = ia; |
319 |
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array[1] = ib; |
320 |
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array[2] = ic; |
321 |
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ksort(3,array); |
322 |
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for (i=0; i < rings.nring6; i++) |
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{ |
324 |
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for (j=0; j < 4; j++) |
325 |
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{ |
326 |
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if (array[0] == rings.r16[i][j]) |
327 |
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{ |
328 |
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for (k=j+1; k < 5; k++) |
329 |
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{ |
330 |
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if (array[1] == rings.r16[i][k]) |
331 |
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{ |
332 |
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for (l=k+1; l < 6; l++) |
333 |
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{ |
334 |
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if (array[2] == rings.r16[i][l]) |
335 |
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return(TRUE); |
336 |
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} |
337 |
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} |
338 |
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} |
339 |
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} |
340 |
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} |
341 |
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} |
342 |
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return(FALSE); |
343 |
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} |
344 |
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/* -------------------------------------------------------- */ |
345 |
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int is_ring66(int *array) |
346 |
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{ |
347 |
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int i; |
348 |
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for(i=0; i < rings.nring6; i++) |
349 |
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{ |
350 |
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if ( array[0] == rings.r16[i][0] && array[1] == rings.r16[i][1] && array[2] == rings.r16[i][2] && |
351 |
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array[3] == rings.r16[i][3] && array[4] == rings.r16[i][4] && array[5] == rings.r16[i][5]) |
352 |
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return(TRUE); |
353 |
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} |
354 |
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return (FALSE); |
355 |
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} |
356 |
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/* -------------------------------------------------------- */ |
357 |
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|
358 |
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void get_rings() |
359 |
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{ |
360 |
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int i,j, add_ring, k, l; |
361 |
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int jatm,katm; |
362 |
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int array[6]; |
363 |
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364 |
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rings.nring3 = 0; |
365 |
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rings.nring4 = 0; |
366 |
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rings.nring5 = 0; |
367 |
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rings.nring6 = 0; |
368 |
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369 |
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// get three membered rings |
370 |
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for (i=0; i < angles.nang; i++) |
371 |
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{ |
372 |
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if (isbond(angles.i13[i][0], angles.i13[i][2])) |
373 |
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{ |
374 |
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array[0] = angles.i13[i][0]; |
375 |
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array[1] = angles.i13[i][1]; |
376 |
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array[2] = angles.i13[i][2]; |
377 |
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ksort(3, array); |
378 |
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add_ring = TRUE; |
379 |
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for (j = 0; j < rings.nring3; j++) |
380 |
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{ |
381 |
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if (array[0] == rings.r13[j][0] && array[1] == rings.r13[j][1] |
382 |
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&& array[2] == rings.r13[j][2]) |
383 |
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{ |
384 |
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add_ring = FALSE; |
385 |
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break; |
386 |
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} |
387 |
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} |
388 |
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if (add_ring == TRUE) |
389 |
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{ |
390 |
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rings.r13[rings.nring3][0] = array[0]; |
391 |
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rings.r13[rings.nring3][1] = array[1]; |
392 |
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rings.r13[rings.nring3][2] = array[2]; |
393 |
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rings.nring3++; |
394 |
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} |
395 |
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} |
396 |
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} |
397 |
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// get four membered rings |
398 |
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for(i=1; i <= natom; i++) |
399 |
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{ |
400 |
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for(j=0; j < MAXIAT; j++) |
401 |
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{ |
402 |
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if (atom[i].iat[j] != 0 && atom[i].bo[j] != 9) |
403 |
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{ |
404 |
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jatm = atom[i].iat[j]; |
405 |
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for (k=0; k < MAXIAT; k++) |
406 |
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{ |
407 |
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if (atom[jatm].iat[k] != 0 && atom[jatm].bo[k] != 9 && atom[jatm].iat[k] != i) |
408 |
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{ |
409 |
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katm = atom[jatm].iat[k]; |
410 |
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if (!(isbond(katm,i))) |
411 |
|
|
{ |
412 |
|
|
for(l=0; l < MAXIAT; l++) |
413 |
|
|
{ |
414 |
|
|
if (atom[katm].iat[l] != 0 && atom[katm].bo[l] != 9 && atom[katm].iat[l] != jatm) |
415 |
|
|
{ |
416 |
|
|
if (isbond(i,atom[katm].iat[l]) ) |
417 |
|
|
{ |
418 |
|
|
array[0] = i; |
419 |
|
|
array[1] = jatm; |
420 |
|
|
array[2] = katm; |
421 |
|
|
array[3] = atom[katm].iat[l]; |
422 |
|
|
ksort(4, array); |
423 |
|
|
if ( is_ring44(array) == FALSE ) |
424 |
|
|
{ |
425 |
|
|
rings.r14[rings.nring4][0] = array[0]; |
426 |
|
|
rings.r14[rings.nring4][1] = array[1]; |
427 |
|
|
rings.r14[rings.nring4][2] = array[2]; |
428 |
|
|
rings.r14[rings.nring4][3] = array[3]; |
429 |
|
|
rings.nring4++; |
430 |
|
|
} |
431 |
|
|
} |
432 |
|
|
} |
433 |
|
|
} |
434 |
|
|
} |
435 |
|
|
} |
436 |
|
|
} |
437 |
|
|
} |
438 |
|
|
} |
439 |
|
|
} |
440 |
|
|
// get five membered rings |
441 |
|
|
for(i=0; i < torsions.ntor; i++) |
442 |
|
|
{ |
443 |
|
|
if (!isbond(torsions.i14[i][0],torsions.i14[i][3])) |
444 |
|
|
{ |
445 |
|
|
for (j=0; j < MAXIAT; j++) |
446 |
|
|
{ |
447 |
|
|
jatm = atom[torsions.i14[i][0]].iat[j]; |
448 |
|
|
if ( jatm != torsions.i14[i][1] && jatm != torsions.i14[i][2] && jatm != torsions.i14[i][3] ) |
449 |
|
|
{ |
450 |
|
|
if (isbond(jatm,torsions.i14[i][3])) |
451 |
|
|
{ |
452 |
|
|
array[0] = jatm; |
453 |
|
|
array[1] = torsions.i14[i][0]; |
454 |
|
|
array[2] = torsions.i14[i][1]; |
455 |
|
|
array[3] = torsions.i14[i][2]; |
456 |
|
|
array[4] = torsions.i14[i][3]; |
457 |
|
|
ksort(5,array); |
458 |
|
|
if ( is_ring55(array) == FALSE ) |
459 |
|
|
{ |
460 |
|
|
rings.r15[rings.nring5][0] = array[0]; |
461 |
|
|
rings.r15[rings.nring5][1] = array[1]; |
462 |
|
|
rings.r15[rings.nring5][2] = array[2]; |
463 |
|
|
rings.r15[rings.nring5][3] = array[3]; |
464 |
|
|
rings.r15[rings.nring5][4] = array[4]; |
465 |
|
|
rings.nring5++; |
466 |
|
|
if (rings.nring5 >= natom) |
467 |
|
|
message_alert("Error. Too many 5 membered rings!","ERROR"); |
468 |
|
|
|
469 |
|
|
} |
470 |
|
|
} |
471 |
|
|
} |
472 |
|
|
} |
473 |
|
|
} |
474 |
|
|
} |
475 |
|
|
// get six membered rings |
476 |
|
|
for(i=0; i <= natom; i++) |
477 |
|
|
{ |
478 |
|
|
if (atom[i].type != 5 && atom[i].type != 20) |
479 |
|
|
{ |
480 |
|
|
if (is_cyclo6(i, array)) |
481 |
|
|
{ |
482 |
|
|
ksort(6,array); |
483 |
|
|
if (is_ring66(array) == FALSE) |
484 |
|
|
{ |
485 |
|
|
rings.r16[rings.nring6][0] = array[0]; |
486 |
|
|
rings.r16[rings.nring6][1] = array[1]; |
487 |
|
|
rings.r16[rings.nring6][2] = array[2]; |
488 |
|
|
rings.r16[rings.nring6][3] = array[3]; |
489 |
|
|
rings.r16[rings.nring6][4] = array[4]; |
490 |
|
|
rings.r16[rings.nring6][5] = array[5]; |
491 |
|
|
rings.nring6++; |
492 |
|
|
if (rings.nring6 >= natom) |
493 |
|
|
message_alert("Error. Too many 6 membered rings!","ERROR"); |
494 |
|
|
} |
495 |
|
|
} |
496 |
|
|
} |
497 |
|
|
} |
498 |
|
|
|
499 |
|
|
/* if (rings.nring3 != 0) |
500 |
wdelano |
58 |
fprintf(pcmlogfile,"Number of three membered rings: %d\n",rings.nring3); |
501 |
tjod |
3 |
if (rings.nring4 != 0) |
502 |
wdelano |
58 |
fprintf(pcmlogfile,"Number of four membered rings: %d\n",rings.nring4); |
503 |
tjod |
3 |
if (rings.nring5 != 0) |
504 |
wdelano |
58 |
fprintf(pcmlogfile,"Number of five membered rings: %d\n",rings.nring5); |
505 |
tjod |
3 |
if (rings.nring6 != 0) |
506 |
wdelano |
58 |
fprintf(pcmlogfile,"Number of six membered rings: %d\n",rings.nring6); */ |
507 |
tjod |
3 |
|
508 |
|
|
} |
509 |
|
|
/* =================================================== */ |
510 |
|
|
void ksort(int num, int array[]) |
511 |
|
|
{ |
512 |
|
|
int i,temp; |
513 |
|
|
int found; |
514 |
|
|
|
515 |
|
|
L_1: |
516 |
|
|
found = FALSE; |
517 |
|
|
for (i=0; i < num-1; i++) |
518 |
|
|
{ |
519 |
|
|
if (array[i+1] < array[i]) |
520 |
|
|
{ |
521 |
|
|
temp = array[i]; |
522 |
|
|
array[i] = array[i+1]; |
523 |
|
|
array[i+1] = temp; |
524 |
|
|
found = TRUE; |
525 |
|
|
} |
526 |
|
|
} |
527 |
|
|
if (found == TRUE) |
528 |
|
|
goto L_1; |
529 |
|
|
} |