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root/gclib/seqalign/itest.2line
Revision: 86
Committed: Fri Sep 30 21:38:39 2011 UTC (9 years, 7 months ago) by gpertea
File size: 1022 byte(s)
Log Message:
fixed a few more subtle bugs

Line User Rev File contents
1 gpertea 86 # v test:
2     ACTGCTAGACTATGACA
3     ATCGTAGCTGTGCTAGTGCTGTGACCATAACCGACTCGACTGCTA
4 gpertea 81
5 gpertea 86
6     # simple test:
7     ACTCT-CTGACTATGACA
8     CATAACCGACTCGACTG-CTANC
9    
10     # simple test:
11     TATGATGAACTATGACACTGATGCTGATG
12     ACTCGTGATCGTGATCGTGACTGCTGTAGCTGCTAGTGCTGATCGTGCTAGTCGTAGTCGTGTGTAGCTGACTGACTGACTGTAGTGCGCTAGTGCTAGCCCTGCACTCGAACCGACTGCACTGAGCTATGNTG
13    
14 gpertea 84 #ctest
15     GGCGACAGCCT-TAGCATG-AGTAGACATACATA
16     CGGGTACTCGACTG-CTGTAGCATGCNGTAGTG
17 gpertea 81
18 gpertea 86
19 gpertea 81 # simple test:
20 gpertea 78 ACTGC-CTGAACTATGACACTGATGCTGATG
21     CACTCGAACCGACTGCACTGA-CTATGA
22 gpertea 75
23 gpertea 74 #ctest
24 gpertea 84 GGCGACAGCCT-TAGCATG-AGTAGACATACATA
25 gpertea 74 CGGGTACTCGACTG-CTGTAGCATGCNGTAGTG
26    
27 gpertea 86 # current test:
28     GTACTCT-CTGAC-GAATCGTGCAGGGC
29     ACTCGTGATCGTGATCGTGACTGCTGTAGCTGCTAGTGCTGATCGTGCTAGTCGTAGTCGTGTGTAGCTGACTGACTGACTGTAGTGCGCTAGTGCTAGCCGGGTACTCGACTG-CTGAATCNTGC