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Revision 89 - (view) (annotate) - [select for diffs]
Modified Mon Oct 3 18:42:24 2011 UTC (9 years, 7 months ago) by gpertea
File length: 1710 byte(s)
Diff to previous 87 , to selected 78
separate wrappers for 5' and  3' alignments

Revision 87 - (view) (annotate) - [select for diffs]
Modified Sun Oct 2 19:12:03 2011 UTC (9 years, 7 months ago) by gpertea
File length: 1127 byte(s)
Diff to previous 86 , to selected 78
disable pointer arithmetic in GXGreedyExtend(), it's bad

Revision 86 - (view) (annotate) - [select for diffs]
Modified Fri Sep 30 21:38:39 2011 UTC (9 years, 7 months ago) by gpertea
File length: 1022 byte(s)
Diff to previous 84 , to selected 78
fixed a few more subtle bugs

Revision 84 - (view) (annotate) - [select for diffs]
Modified Fri Sep 30 03:19:32 2011 UTC (9 years, 7 months ago) by gpertea
File length: 506 byte(s)
Diff to previous 81 , to selected 78
wip bad

Revision 81 - (view) (annotate) - [select for diffs]
Modified Thu Sep 29 19:02:24 2011 UTC (9 years, 7 months ago) by gpertea
File length: 424 byte(s)
Diff to previous 78
fixes, still a bug with flast_d[d] = flast_d[d] - flower + 2;

Revision 78 - (view) (annotate) - [selected]
Modified Wed Sep 28 03:20:10 2011 UTC (9 years, 7 months ago) by gpertea
File length: 316 byte(s)
Diff to previous 75
3' match seems to work, needs a few refinements

Revision 75 - (view) (annotate) - [select for diffs]
Modified Tue Sep 27 02:24:57 2011 UTC (9 years, 7 months ago) by gpertea
File length: 423 byte(s)
Diff to previous 74 , to selected 78
implementing GreedyAlign for best rseeds etc.

Revision 74 - (view) (annotate) - [select for diffs]
Added Tue Sep 27 01:22:37 2011 UTC (9 years, 7 months ago) by gpertea
File length: 205 byte(s)
Diff to selected 78
added seqalign files

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