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root/gclib/seqalign/itest.2line
Revision: 75
Committed: Tue Sep 27 02:24:57 2011 UTC (9 years, 7 months ago) by gpertea
File size: 423 byte(s)
Log Message:
implementing GreedyAlign for best rseeds etc.

Line File contents
1 # simple test:
2 ACTGC-GTCAGTATGACACTGATGCTGATGCTGTAGCTGTGC
3 CACTCGAACCGACTCGACTG-CTANC
4
5
6 # simple test:
7 ACTGC-CTGACTATGACACTGATGCTGATGCTGTAGCTGTGC
8 CACTCGAACCGACTGCACTG-CTANC
9
10 #ctest
11 CGGGTACTCGACTG-CTGTAGCATGCNGTAGTG
12 GGCGACAGCCT-TAGCATG-AGTAGACATACATA
13 # current test:
14 GTACTCT-CTGAC-GAATCGTGTNGGGC
15 CGGGTACTCGACTG-CTGAATCNTGCAG
16
17 # simple test:
18 ACTCT-CTGACTATGACA
19 CATAACCGACTCGACTG-CTANC