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File Last Change
jars/ 1309 (11 years ago) by jmduarteg: New jar for uniprot JAPI
modelit/ 1301 (11 years ago) by hstehr: overwriting default contactTypes.dat with the one needed for CMView release versions (only contains standard contact types). The old version with all esoteric contact types is renamed to contactTypes.all.dat
reconstruct/ 992 (12 years ago) by jmduarteg: Removed unneeded code
scripts/ 1289 (11 years ago) by jmduarteg: Introduced constant for formatdb executable
src/ 1324 (11 years ago) by jmduarteg: A few bug fixes and improvements in pdb data parsing. - bug fix: in some cases exptl method field has more than 1 value (e.g. 2krl). In cif files this was causing a null pointer. We now parse it properly (taking first one as the exptl method) in both cif and pdb files - improved very slightly the cif file parser moving out of loops the index getters - drop fullLength as a field in Pdb, now we have only getFullLength() - pdb file atom parsing is now column based and not regex based (hopefully will make it slightly faster) - now parsing the element column of pdb files: now the atom type detection comes from the appropriate field in pdb/cif/pdbase. If in pdb file and not present we still try to guess it as before
.classpath 1291 (11 years ago) by cvehlow: Control database access! for CGAP
.project 1065 (12 years ago) by hstehr: reverting changes to .project and .classpath which were accidentally committed
LICENSE 974 (12 years ago) by duarte: Adding license files
Manifest.txt 968 (12 years ago) by duarte: Updated make-aglappe script (and renamed to make-owl). Changed aglappe strings to OWL (following new name of library)
gpl.txt 974 (12 years ago) by duarte: Adding license files
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svn:ignore .classpath .project .settings