trunk/reconstruct/reconstruct.sh

#!/bin/sh
# shell script to run the reconstruct program (a java class in the default package of the OWL Java library)

# If the program is to be used on a cluster through the Sun Grid Engine 
# job scheduler (option -A) this variable needs to be set to wherever the
# root of the local installation of SGE is
sgeroot=/usr/local/sge

exedir=`dirname $0`

jarfiles=`ls $exedir/jars/*.jar`
CLASSPATH="."
for jarfile in $jarfiles
do
        CLASSPATH="$jarfile:$CLASSPATH"
done


if [ -e "$sgeroot/util/arch" ] 
then
        arch=`$sgeroot/util/arch`
        libstr="-Djava.library.path=$sgeroot/lib/$arch"
else
        libstr=""
fi

java $libstr reconstruct $@
Revision:	978
Committed:	Tue Feb 23 18:57:24 2010 UTC (12 years, 5 months ago) by duarte
File size:	631 byte(s)
Log Message:	Moved all reconstruct scripts and config files to reconstruct directory. Modified scripts accordingly
Line	File contents
1	#!/bin/sh
2	# shell script to run the reconstruct program (a java class in the default package of the OWL Java library)
3
4	# If the program is to be used on a cluster through the Sun Grid Engine
5	# job scheduler (option -A) this variable needs to be set to wherever the
6	# root of the local installation of SGE is
7	sgeroot=/usr/local/sge
8
9	exedir=`dirname $0`
10
11	jarfiles=`ls $exedir/jars/*.jar`
12	CLASSPATH="."
13	for jarfile in $jarfiles
14	do
15	CLASSPATH="$jarfile:$CLASSPATH"
16	done
17
18
19
20	if [ -e "$sgeroot/util/arch" ]
21	then
22	arch=`$sgeroot/util/arch`
23	libstr="-Djava.library.path=$sgeroot/lib/$arch"
24	else
25	libstr=""
26	fi
27
28	java $libstr reconstruct $@