| 1 |
#!/bin/sh |
| 2 |
if [ -z "$2" ] |
| 3 |
then |
| 4 |
echo "Usage: make-owl.sh <svn url> <tempdir>" |
| 5 |
echo "e.g. for svn url: svn://black/aglappe/trunk or svn://www.bioinformatics.org/svnroot/owl/tags/owl-1.2.0" |
| 6 |
exit |
| 7 |
fi |
| 8 |
|
| 9 |
svnurl=$1 |
| 10 |
tempdir=$2 |
| 11 |
|
| 12 |
echo "Compiling with:" |
| 13 |
javac -version |
| 14 |
echo "" |
| 15 |
|
| 16 |
|
| 17 |
cd $tempdir |
| 18 |
|
| 19 |
tag=`basename $svnurl` |
| 20 |
|
| 21 |
|
| 22 |
# exporting from svn |
| 23 |
echo "Exporting source from svn" |
| 24 |
svn export $svnurl |
| 25 |
if [ "$?" -ne "0" ] |
| 26 |
then |
| 27 |
echo "Couldn't export from svn. Exiting" |
| 28 |
exit 1 |
| 29 |
fi |
| 30 |
|
| 31 |
|
| 32 |
# compiling |
| 33 |
echo "Compiling..." |
| 34 |
cd $tag/src |
| 35 |
|
| 36 |
|
| 37 |
jarfiles=`ls ../jars/*.jar` |
| 38 |
CLASSPATH="." |
| 39 |
for jarfile in $jarfiles |
| 40 |
do |
| 41 |
CLASSPATH="$jarfile:$CLASSPATH" |
| 42 |
done |
| 43 |
jarfiles=`ls ../jars/uniprot/*.jar` |
| 44 |
for jarfile in $jarfiles |
| 45 |
do |
| 46 |
CLASSPATH="$jarfile:$CLASSPATH" |
| 47 |
done |
| 48 |
|
| 49 |
echo $CLASSPATH |
| 50 |
|
| 51 |
|
| 52 |
javac \ |
| 53 |
*.java \ |
| 54 |
owl/core/structure/*.java \ |
| 55 |
owl/core/sequence/*.java \ |
| 56 |
owl/core/util/*.java \ |
| 57 |
owl/core/connections/*.java \ |
| 58 |
owl/core/features/*.java \ |
| 59 |
owl/core/runners/*.java |
| 60 |
|
| 61 |
# creating jar file |
| 62 |
echo "Creating jar file: $tag.jar ..." |
| 63 |
jar -cfm ../../$tag.jar ../Manifest.txt . |
| 64 |
|
| 65 |
# removing $tag temp directory |
| 66 |
cd ../.. |
| 67 |
rm -rf $tag |
