 ../
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core/
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1170
(11 years ago)
by hstehr:
adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
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graphAveraging/
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1170
(11 years ago)
by hstehr:
adding secondary structure functions to RIGEnsemble and GraphAverager: GraphAverager can now use DSSP to get consensus secondary structure from underlying structures.
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casp/
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1169
(11 years ago)
by hstehr:
some more fixes for doing benchmarking on Casp9 targets
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gmbp/
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1163
(11 years ago)
by jmduarteg:
Got rid of german text (was causing a warning in compilation), anyway there shouldn't be any german... unless we start i8nsing.
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sadp/
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1084
(11 years ago)
by matt4077:
renamed conflicting ContactMap class.
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decoyScoring/
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1059
(12 years ago)
by jmduarteg:
Fixed java doc
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deltaRank/
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1057
(12 years ago)
by matt4077:
add psi/phi constraints from secondary structure to tinker reconstructions
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tests/
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1042
(12 years ago)
by jmduarteg:
New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
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embed/
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1018
(12 years ago)
by hstehr:
removing a warning in owl.embed.contactmaps.Demes
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litNet/
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1007
(12 years ago)
by hstehr:
refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
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ppi/
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1007
(12 years ago)
by hstehr:
refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
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