 ../
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connections/
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1103
(12 years ago)
by jmduarteg:
Implemented caching for EMBWSDBfetchConnection
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features/
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1049
(12 years ago)
by hstehr:
removing @Override annotations which were causing compilation errors for me
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runners/
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1097
(12 years ago)
by jmduarteg:
Now explicitely specifying output dnd file in tcoffee so it can be removed by the calling program.
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sequence/
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1104
(12 years ago)
by jmduarteg:
Now reading uniprot version from reldate.txt and checking against the uniprot api version
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structure/
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1094
(12 years ago)
by jmduarteg:
Implemented reduced alphabets in AminoAcid class and modified entropy calculation to allow reduced alphabets.
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util/
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1042
(12 years ago)
by jmduarteg:
New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)
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