 ../
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structure/
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1135
(11 years ago)
by cvehlow:
Check for consistency in translation rotation framework.
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sequence/
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1133
(11 years ago)
by jmduarteg:
Fixed bug: getNucleotideAlignment was nullpointing when encountering a null return from getRepresentativeCDS() (which happens whenever there is no representative CDS for the particular UniprotEntry). Now checking for nulls before using the homolog in the alignment.
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runners/
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1132
(11 years ago)
by jmduarteg:
New SelectonRunner class. More taxonomy information retrieved from uniprot.
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util/
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1119
(11 years ago)
by jmduarteg:
Now checking also for ambiguous nucleotide codes (n, m) when translating. Changed implementation of translation by using the new Codon class.
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connections/
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1108
(11 years ago)
by jmduarteg:
Now parsing the symmetry operators.
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features/
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1049
(12 years ago)
by hstehr:
removing @Override annotations which were causing compilation errors for me
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