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root/owl/trunk/src/owl/core/runners/blast
r1327
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BlastError.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
BlastHit.java 1306 (10 years ago) by jmduarteg: Added Serializable interface to many classes. To be able to serialize classes containing objects of these types.
BlastHitList.java 1304 (10 years ago) by jmduarteg: Fixed important bug: we didn't model the blast data properly. A hit is composed of several hsps. Now our classes following that data model properly (before we treated a hit as an hsp).
BlastHsp.java 1306 (10 years ago) by jmduarteg: Added Serializable interface to many classes. To be able to serialize classes containing objects of these types.
BlastRunner.java 1304 (10 years ago) by jmduarteg: Fixed important bug: we didn't model the blast data properly. A hit is composed of several hsps. Now our classes following that data model properly (before we treated a hit as an hsp).
BlastTabularParser.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
BlastUtils.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
BlastXMLParser.java 1304 (10 years ago) by jmduarteg: Fixed important bug: we didn't model the blast data properly. A hit is composed of several hsps. Now our classes following that data model properly (before we treated a hit as an hsp).
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