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root/owl/trunk/src/owl/core/sequence/alignment
r1140
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AlignmentConstructionError.java 1009 (12 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PairwiseAlignmentConverter.java 1009 (12 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PairwiseSequenceAlignment.java 1116 (12 years ago) by jmduarteg: Now properly translating all frames and finding the best translation match in checkEmblCDSMatching. New class doing all the matching of protein to CDS.
MultipleSequenceAlignment.java 1140 (12 years ago) by jmduarteg: Fixed bug: now nucleotide alignment is in same order as protein alignment
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