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root/owl/trunk/src/owl/core/sequence/alignment
r1265
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AlignmentConstructionError.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
PairwiseAlignmentConverter.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
MultipleSequenceAlignment.java 1140 (10 years ago) by jmduarteg: Fixed bug: now nucleotide alignment is in same order as protein alignment
PairwiseSequenceAlignment.java 1166 (10 years ago) by jmduarteg: Fixed bug: not allowing anymore the presence of gaps when choosing the representative CDS to uniprot match. Now the nucleotide alignments should be always correct (before they were shifted if there were gaps in CDS-to-uniprot)
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