core/sequence/geneticCode.dat

--**************************************************************************
--  This is the NCBI genetic code table
--  Initial base data set from Andrzej Elzanowski while at PIR International
--  Addition of Eubacterial and Alternative Yeast by J.Ostell at NCBI
--  Base 1-3 of each codon have been added as comments to facilitate
--    readability at the suggestion of Peter Rice, EMBL
--  Later additions by Taxonomy Group staff at NCBI
--
--  Version 3.9
--     Code 14 differs from code 9 only by translating UAA to Tyr rather than
--     STOP.  A recent study (Telford et al, 2000) has found no evidence that
--     the codon UAA codes for Tyr in the flatworms, but other opinions exist.
--     There are very few GenBank records that are translated with code 14,
--     but a test translation shows that retranslating these records with code
--     9 can cause premature terminations.  Therefore, GenBank will maintain
--     code 14 until further information becomes available.
--
--  Version 3.8
--     Added GTG start to Echinoderm mitochondrial code, code 9
--
--  Version 3.7
--     Added code 23 Thraustochytrium mitochondrial code
--        formerly OGMP code 93
--        submitted by Gertraude Berger, Ph.D.
--
--  Version 3.6
--     Added code 22 TAG-Leu, TCA-stop
--        found in mitochondrial DNA of Scenedesmus obliquus
--        submitted by Gertraude Berger, Ph.D.
--        Organelle Genome Megasequencing Program, Univ Montreal
--
--  Version 3.5
--     Added code 21, Trematode Mitochondrial
--       (as deduced from: Garey & Wolstenholme,1989; Ohama et al, 1990)
--     Added code 16, Chlorophycean Mitochondrial
--       (TAG can translated to Leucine instaed to STOP in chlorophyceans
--        and fungi)
--
--  Version 3.4
--     Added CTG,TTG as allowed alternate start codons in Standard code.
--        Prats et al. 1989, Hann et al. 1992
--
--  Version 3.3 - 10/13/95
--     Added alternate intiation codon ATC to code 5
--        based on complete mitochondrial genome of honeybee
--        Crozier and Crozier (1993)
--
--  Version 3.2 - 6/24/95
--  Code       Comments
--   10        Alternative Ciliate Macronuclear renamed to Euplotid Macro...
--   15        Bleharisma Macro.. code added
--    5        Invertebrate Mito.. GTG allowed as alternate initiator
--   11        Eubacterial renamed to Bacterial as most alternate starts
--               have been found in Achea
--
--
--  Version 3.1 - 1995
--  Updated as per Andrzej Elzanowski at NCBI
--     Complete documentation in NCBI toolkit documentation
--  Note: 2 genetic codes have been deleted
--
--   Old id   Use id     - Notes
--
--   id 7      id 4      - Kinetoplast code now merged in code id 4
--   id 8      id 1      - all plant chloroplast differences due to RNA edit
--
--*************************************************************************

Genetic-code-table ::= {
 {
  name "Standard" ,
  name "SGC0" ,
  id 1 ,
  ncbieaa  "FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "---M---------------M---------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Vertebrate Mitochondrial" ,
  name "SGC1" ,
  id 2 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSS**VVVVAAAADDEEGGGG",
  sncbieaa "--------------------------------MMMM---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Yeast Mitochondrial" ,
  name "SGC2" ,
  id 3 ,
  ncbieaa  "FFLLSSSSYY**CCWWTTTTPPPPHHQQRRRRIIMMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "----------------------------------MM----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
    name "Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate
 Mitochondrial; Mycoplasma; Spiroplasma" ,
  name "SGC3" ,
  id 4 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "--MM---------------M------------MMMM---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Invertebrate Mitochondrial" ,
  name "SGC4" ,
  id 5 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSSSVVVVAAAADDEEGGGG",
  sncbieaa "---M----------------------------MMMM---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Ciliate Nuclear; Dasycladacean Nuclear; Hexamita Nuclear" ,
  name "SGC5" ,
  id 6 ,
  ncbieaa  "FFLLSSSSYYQQCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Echinoderm Mitochondrial; Flatworm Mitochondrial" ,
  name "SGC8" ,
  id 9 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Euplotid Nuclear" ,
  name "SGC9" ,
  id 10 ,
  ncbieaa  "FFLLSSSSYY**CCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Bacterial and Plant Plastid" ,
  id 11 ,
  ncbieaa  "FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "---M---------------M------------MMMM---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Alternative Yeast Nuclear" ,
  id 12 ,
  ncbieaa  "FFLLSSSSYY**CC*WLLLSPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-------------------M---------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Ascidian Mitochondrial" ,
  id 13 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSGGVVVVAAAADDEEGGGG",
  sncbieaa "---M------------------------------MM---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 },
 {
  name "Alternative Flatworm Mitochondrial" ,
  id 14 ,
  ncbieaa  "FFLLSSSSYYY*CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 } ,
 {
  name "Blepharisma Macronuclear" ,
  id 15 ,
  ncbieaa  "FFLLSSSSYY*QCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 } ,
 {
  name "Chlorophycean Mitochondrial" ,
  id 16 ,
  ncbieaa  "FFLLSSSSYY*LCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 } ,
 {
  name "Trematode Mitochondrial" ,
  id 21 ,
  ncbieaa  "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 } ,
 {
  name "Scenedesmus obliquus Mitochondrial" ,
  id 22 ,
  ncbieaa  "FFLLSS*SYY*LCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "-----------------------------------M----------------------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 } ,
 {
  name "Thraustochytrium Mitochondrial" ,
  id 23 ,
  ncbieaa  "FF*LSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
  sncbieaa "--------------------------------M--M---------------M------------"
  -- Base1  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
  -- Base2  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
  -- Base3  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
 }
}
Revision:	1114
Committed:	Wed Jun 16 10:26:22 2010 UTC (12 years, 1 month ago) by jmduarteg
File size:	10644 byte(s)
Log Message:	New feature: code for dna to protein translation
Line	File contents
1	--**************************************************************************
2	-- This is the NCBI genetic code table
3	-- Initial base data set from Andrzej Elzanowski while at PIR International
4	-- Addition of Eubacterial and Alternative Yeast by J.Ostell at NCBI
5	-- Base 1-3 of each codon have been added as comments to facilitate
6	-- readability at the suggestion of Peter Rice, EMBL
7	-- Later additions by Taxonomy Group staff at NCBI
8	--
9	-- Version 3.9
10	-- Code 14 differs from code 9 only by translating UAA to Tyr rather than
11	-- STOP. A recent study (Telford et al, 2000) has found no evidence that
12	-- the codon UAA codes for Tyr in the flatworms, but other opinions exist.
13	-- There are very few GenBank records that are translated with code 14,
14	-- but a test translation shows that retranslating these records with code
15	-- 9 can cause premature terminations. Therefore, GenBank will maintain
16	-- code 14 until further information becomes available.
17	--
18	-- Version 3.8
19	-- Added GTG start to Echinoderm mitochondrial code, code 9
20	--
21	-- Version 3.7
22	-- Added code 23 Thraustochytrium mitochondrial code
23	-- formerly OGMP code 93
24	-- submitted by Gertraude Berger, Ph.D.
25	--
26	-- Version 3.6
27	-- Added code 22 TAG-Leu, TCA-stop
28	-- found in mitochondrial DNA of Scenedesmus obliquus
29	-- submitted by Gertraude Berger, Ph.D.
30	-- Organelle Genome Megasequencing Program, Univ Montreal
31	--
32	-- Version 3.5
33	-- Added code 21, Trematode Mitochondrial
34	-- (as deduced from: Garey & Wolstenholme,1989; Ohama et al, 1990)
35	-- Added code 16, Chlorophycean Mitochondrial
36	-- (TAG can translated to Leucine instaed to STOP in chlorophyceans
37	-- and fungi)
38	--
39	-- Version 3.4
40	-- Added CTG,TTG as allowed alternate start codons in Standard code.
41	-- Prats et al. 1989, Hann et al. 1992
42	--
43	-- Version 3.3 - 10/13/95
44	-- Added alternate intiation codon ATC to code 5
45	-- based on complete mitochondrial genome of honeybee
46	-- Crozier and Crozier (1993)
47	--
48	-- Version 3.2 - 6/24/95
49	-- Code Comments
50	-- 10 Alternative Ciliate Macronuclear renamed to Euplotid Macro...
51	-- 15 Bleharisma Macro.. code added
52	-- 5 Invertebrate Mito.. GTG allowed as alternate initiator
53	-- 11 Eubacterial renamed to Bacterial as most alternate starts
54	-- have been found in Achea
55	--
56	--
57	-- Version 3.1 - 1995
58	-- Updated as per Andrzej Elzanowski at NCBI
59	-- Complete documentation in NCBI toolkit documentation
60	-- Note: 2 genetic codes have been deleted
61	--
62	-- Old id Use id - Notes
63	--
64	-- id 7 id 4 - Kinetoplast code now merged in code id 4
65	-- id 8 id 1 - all plant chloroplast differences due to RNA edit
66	--
67	--*************************************************************************
68
69	Genetic-code-table ::= {
70	{
71	name "Standard" ,
72	name "SGC0" ,
73	id 1 ,
74	ncbieaa "FFLLSSSSYY*CCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
75	sncbieaa "---M---------------M---------------M----------------------------"
76	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
77	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
78	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
79	},
80	{
81	name "Vertebrate Mitochondrial" ,
82	name "SGC1" ,
83	id 2 ,
84	ncbieaa "FFLLSSSSYYCCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSVVVVAAAADDEEGGGG",
85	sncbieaa "--------------------------------MMMM---------------M------------"
86	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
87	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
88	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
89	},
90	{
91	name "Yeast Mitochondrial" ,
92	name "SGC2" ,
93	id 3 ,
94	ncbieaa "FFLLSSSSYY**CCWWTTTTPPPPHHQQRRRRIIMMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
95	sncbieaa "----------------------------------MM----------------------------"
96	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
97	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
98	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
99	},
100	{
101	name "Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate
102	Mitochondrial; Mycoplasma; Spiroplasma" ,
103	name "SGC3" ,
104	id 4 ,
105	ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
106	sncbieaa "--MM---------------M------------MMMM---------------M------------"
107	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
108	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
109	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
110	},
111	{
112	name "Invertebrate Mitochondrial" ,
113	name "SGC4" ,
114	id 5 ,
115	ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSSSVVVVAAAADDEEGGGG",
116	sncbieaa "---M----------------------------MMMM---------------M------------"
117	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
118	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
119	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
120	},
121	{
122	name "Ciliate Nuclear; Dasycladacean Nuclear; Hexamita Nuclear" ,
123	name "SGC5" ,
124	id 6 ,
125	ncbieaa "FFLLSSSSYYQQCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
126	sncbieaa "-----------------------------------M----------------------------"
127	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
128	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
129	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
130	},
131	{
132	name "Echinoderm Mitochondrial; Flatworm Mitochondrial" ,
133	name "SGC8" ,
134	id 9 ,
135	ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
136	sncbieaa "-----------------------------------M---------------M------------"
137	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
138	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
139	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
140	},
141	{
142	name "Euplotid Nuclear" ,
143	name "SGC9" ,
144	id 10 ,
145	ncbieaa "FFLLSSSSYY**CCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
146	sncbieaa "-----------------------------------M----------------------------"
147	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
148	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
149	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
150	},
151	{
152	name "Bacterial and Plant Plastid" ,
153	id 11 ,
154	ncbieaa "FFLLSSSSYY*CCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
155	sncbieaa "---M---------------M------------MMMM---------------M------------"
156	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
157	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
158	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
159	},
160	{
161	name "Alternative Yeast Nuclear" ,
162	id 12 ,
163	ncbieaa "FFLLSSSSYY*CCWLLLSPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
164	sncbieaa "-------------------M---------------M----------------------------"
165	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
166	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
167	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
168	},
169	{
170	name "Ascidian Mitochondrial" ,
171	id 13 ,
172	ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSGGVVVVAAAADDEEGGGG",
173	sncbieaa "---M------------------------------MM---------------M------------"
174	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
175	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
176	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
177	},
178	{
179	name "Alternative Flatworm Mitochondrial" ,
180	id 14 ,
181	ncbieaa "FFLLSSSSYYY*CCWWLLLLPPPPHHQQRRRRIIIMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
182	sncbieaa "-----------------------------------M----------------------------"
183	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
184	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
185	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
186	} ,
187	{
188	name "Blepharisma Macronuclear" ,
189	id 15 ,
190	ncbieaa "FFLLSSSSYYQCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
191	sncbieaa "-----------------------------------M----------------------------"
192	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
193	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
194	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
195	} ,
196	{
197	name "Chlorophycean Mitochondrial" ,
198	id 16 ,
199	ncbieaa "FFLLSSSSYYLCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
200	sncbieaa "-----------------------------------M----------------------------"
201	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
202	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
203	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
204	} ,
205	{
206	name "Trematode Mitochondrial" ,
207	id 21 ,
208	ncbieaa "FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNNKSSSSVVVVAAAADDEEGGGG",
209	sncbieaa "-----------------------------------M---------------M------------"
210	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
211	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
212	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
213	} ,
214	{
215	name "Scenedesmus obliquus Mitochondrial" ,
216	id 22 ,
217	ncbieaa "FFLLSSSYYLCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
218	sncbieaa "-----------------------------------M----------------------------"
219	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
220	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
221	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
222	} ,
223	{
224	name "Thraustochytrium Mitochondrial" ,
225	id 23 ,
226	ncbieaa "FFLSSSSYYCCWLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG",
227	sncbieaa "--------------------------------M--M---------------M------------"
228	-- Base1 TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
229	-- Base2 TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
230	-- Base3 TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
231	}
232	}