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root/owl/trunk/src/owl/core/structure/graphs
r1327
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RIGraphMinSpanningTree.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
RIGraph.java 1316 (10 years ago) by jmduarteg: Got rid (finally!) of AAinfo. Its functionality is now in ContactType and AminoAcid.
RIGNode.java 1314 (10 years ago) by jmduarteg: Finally got rid of all duplicated amino acid methods in AAinfo. Now everything unified in AminoAcid enum.
RIGNbhood.java 1314 (10 years ago) by jmduarteg: Finally got rid of all duplicated amino acid methods in AAinfo. Now everything unified in AminoAcid enum.
RIGMatrix.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
RIGGeometry.java 1314 (10 years ago) by jmduarteg: Finally got rid of all duplicated amino acid methods in AAinfo. Now everything unified in AminoAcid enum.
RIGEnsemble.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
RIGEdge.java 1038 (11 years ago) by matt4077: revert. wasn't the best idea.
RIGCommonNbhood.java 1314 (10 years ago) by jmduarteg: Finally got rid of all duplicated amino acid methods in AAinfo. Now everything unified in AminoAcid enum.
ProtStructGraph.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
NbhoodBackgrnd.java 1314 (10 years ago) by jmduarteg: Finally got rid of all duplicated amino acid methods in AAinfo. Now everything unified in AminoAcid enum.
NbhProbDistribution.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
GraphIdNotFoundError.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
GraphIOGDLFile.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
GraphIODb.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
GraphComparisonResult.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
FileRIGraph.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
DbRIGraph.java 1316 (10 years ago) by jmduarteg: Got rid (finally!) of AAinfo. Its functionality is now in ContactType and AminoAcid.
CaspRRFileRIGraph.java 1326 (10 years ago) by jmduarteg: Renamed xxxxError classes to xxxxException as they should be.
CaspRRFileData.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
AIGraph.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
AIGNode.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
AIGEdge.java 1009 (11 years ago) by hstehr: refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
AICGraph.java 1276 (10 years ago) by jmduarteg: More methods to report on interfaces clashes. Extracted clash distance constant.
AICGEdge.java 1306 (10 years ago) by jmduarteg: Added Serializable interface to many classes. To be able to serialize classes containing objects of these types.
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