Revision
1057 -
Directory Listing
Modified
Mon May 3 15:51:54 2010 UTC
(12 years, 1 month ago)
by
matt4077
add psi/phi constraints from secondary structure to tinker reconstructions
Revision
1037 -
Directory Listing
Modified
Tue Apr 20 09:53:00 2010 UTC
(12 years, 2 months ago)
by
matt4077
adding phi/psi constraints to edges
Revision
1013 -
Directory Listing
Modified
Thu Apr 1 10:49:30 2010 UTC
(12 years, 3 months ago)
by
matt4077
resolving conflicts
Revision
1009 -
Directory Listing
Modified
Wed Mar 31 15:50:04 2010 UTC
(12 years, 3 months ago)
by
hstehr
refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
Revision
1007 -
Directory Listing
Modified
Wed Mar 31 13:27:18 2010 UTC
(12 years, 3 months ago)
by
hstehr
Copied from:
trunk/src/deltaRank revision 1005
refactoring: moved casp, deltaRank, embed, graphAveraging, ppi, sadp to owl
Revision
1005 -
Directory Listing
Modified
Wed Mar 31 12:29:26 2010 UTC
(12 years, 3 months ago)
by
hstehr
Original Path:
trunk/src/deltaRank
refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
Revision
996 -
Directory Listing
Modified
Thu Mar 25 12:07:41 2010 UTC
(12 years, 3 months ago)
by
matt4077
Original Path:
trunk/src/deltaRank
reconstruct: added an option -c to add phi/psi constraints from a psipred secondary structure prediction.
Revision
951 -
Directory Listing
Modified
Fri Jan 29 16:12:34 2010 UTC
(12 years, 5 months ago)
by
duarte
Original Path:
trunk/src/deltaRank
Copied from:
trunk/deltaRank revision 949
Reorganised the project with a src folder for java source files.
Added a jars dir with all jars needed for the project.
Added .project and .classpath pointing to relative path of jars.
The project should now work out of the box after a check-out with eclipse. No need to setup external jars or anything.
Revision
946 -
Directory Listing
Modified
Wed Jan 27 17:06:12 2010 UTC
(12 years, 5 months ago)
by
duarte
Original Path:
trunk/deltaRank
Now passing db explicitely instead of using the db from the connection.
