Revision 1042 - Directory Listing
Modified Wed Apr 21 16:11:08 2010 UTC (12 years, 2 months ago) by jmduarteg

New SiftsConnection and SiftsFeature classes for SIFTS pdb to uniprot mapping. Implemented the HasFeatures interface in Pdb. In the future we can hopefully use that mechanism for all features (sec. strucuture, scop and so on)

Revision 1030 - Directory Listing
Modified Mon Apr 19 09:39:07 2010 UTC (12 years, 2 months ago) by jmduarteg

Extracted constants to owl_test_paths.dat and added CASP7 fasta files to resources dir. Now BlastParsersTest should be able to run anywhere.

Revision 1029 - Directory Listing
Modified Mon Apr 19 09:01:51 2010 UTC (12 years, 2 months ago) by jmduarteg

Fixed hard-coded resources paths broken since major restructuring of project.

Revision 1009 - Directory Listing
Modified Wed Mar 31 15:50:04 2010 UTC (12 years, 2 months ago) by hstehr

refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features

Revision 1008 - Directory Listing
Added Wed Mar 31 14:03:27 2010 UTC (12 years, 2 months ago) by hstehr

refactoring: adapting test packages to match new package structure