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Revision 1304 - Directory Listing
Modified Sun Jan 16 16:06:09 2011 UTC (10 years, 10 months ago) by jmduarteg
Fixed important bug: we didn't model the blast data properly. A hit is composed of several hsps. Now our classes following that data model properly (before we treated a hit as an hsp).
Revision 1030 - Directory Listing
Modified Mon Apr 19 09:39:07 2010 UTC (11 years, 7 months ago) by jmduarteg
Extracted constants to owl_test_paths.dat and added CASP7 fasta files to resources dir. Now BlastParsersTest should be able to run anywhere.
Revision 1009 - Directory Listing
Modified Wed Mar 31 15:50:04 2010 UTC (11 years, 8 months ago) by hstehr
Copied from: trunk/src/owl/tests/core/sequence revision 1008
refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features
Revision 1008 - Directory Listing
Modified Wed Mar 31 14:03:27 2010 UTC (11 years, 8 months ago) by hstehr
Original Path: trunk/src/owl/tests/core/sequence
Copied from: trunk/src/tests/sequence revision 1006
refactoring: adapting test packages to match new package structure
Revision 1005 - Directory Listing
Modified Wed Mar 31 12:29:26 2010 UTC (11 years, 8 months ago) by hstehr
Original Path: trunk/src/tests/sequence
refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core
Revision 951 - Directory Listing
Modified Fri Jan 29 16:12:34 2010 UTC (11 years, 10 months ago) by duarte
Original Path: trunk/src/tests/sequence
Reorganised the project with a src folder for java source files.
Added a jars dir with all jars needed for the project.
Added .project and .classpath pointing to relative path of jars. 
The project should now work out of the box after a check-out with eclipse. No need to setup external jars or anything.
Revision 762 - Directory Listing
Modified Thu Sep 25 13:44:21 2008 UTC (13 years, 2 months ago) by duarte
Original Path: trunk/tests/sequence
Added length sanity check tests
Revision 750 - Directory Listing
Modified Tue Sep 16 13:15:25 2008 UTC (13 years, 2 months ago) by duarte
Original Path: trunk/tests/sequence
Now we can run blast with multi threads option
Revision 743 - Directory Listing
Added Thu Sep 11 10:06:22 2008 UTC (13 years, 2 months ago) by duarte
Original Path: trunk/tests/sequence
New tests package (should be a folder and under it packages, but for now we can't do that until we move all source code to a src folder).
Moved all existing tests to appropiate tests packages.
New test PdbParsersTest: does cif against pdbase at the moment.
Adde equals method to SecStrucElement
Added some getters to Pdb