Revision 1009 - Directory Listing
Modified Wed Mar 31 15:50:04 2010 UTC (12 years, 4 months ago) by hstehr

refactoring: moved many many classes to more appropriate packages; created new packages owl.core.sequence.alignment, owl.core.structure.alignment, owl.core.structure.features

Revision 1008 - Directory Listing
Modified Wed Mar 31 14:03:27 2010 UTC (12 years, 4 months ago) by hstehr
Copied from: trunk/src/tests/tinker revision 1006

refactoring: adapting test packages to match new package structure

Revision 1006 - Directory Listing
Modified Wed Mar 31 13:00:35 2010 UTC (12 years, 4 months ago) by hstehr
Original Path: trunk/src/tests/tinker

refactoring: created packages runners.blast, runners.gromacs, structure.graphs, moved actionTools to util, structure.decoyScoring to owl.decoyScoring, tinker to runners.tinker

Revision 1005 - Directory Listing
Modified Wed Mar 31 12:29:26 2010 UTC (12 years, 4 months ago) by hstehr
Original Path: trunk/src/tests/tinker

refactoring: renaming proteinstructure to structure and tools to util; moving connections,features,runners,sequence,structure,util to owl.core

Revision 958 - Directory Listing
Modified Fri Feb 12 15:22:36 2010 UTC (12 years, 5 months ago) by duarte
Original Path: trunk/src/tests/tinker

Moved Interval* and IntPair* classes to tools package

Revision 951 - Directory Listing
Modified Fri Jan 29 16:12:34 2010 UTC (12 years, 6 months ago) by duarte
Original Path: trunk/src/tests/tinker

Reorganised the project with a src folder for java source files.
Added a jars dir with all jars needed for the project.
Added .project and .classpath pointing to relative path of jars. 
The project should now work out of the box after a check-out with eclipse. No need to setup external jars or anything.

Revision 885 - Directory Listing
Added Fri Aug 14 10:37:31 2009 UTC (12 years, 11 months ago) by duarte
Original Path: trunk/tests/tinker

Major change: now hydrogens are read in Pdb and subclasses
New getChirality method in Residue.
Added some more unit tests.