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root/owl/trunk/src/owl/tests/core/structure/data/cullpdb_20
(Generate patch)
# Line 1 | Line 1
1 < # adding a NMR entry to the test set (1NMR), all others are xray. NMR might have special features we want to catch
2 < 1NMR    A
1 > # an NMR entry
2 > 1NMR
3 > # dna only
4 > 1zf5
5 > # dna with a ligand
6 > 292d
7 > # complex dna with prot
8 > 3od8
9 > # rna only
10 > 2krl
11 > # rna with prot
12 > 2xfm
13 > # rna with ligand
14 > 3mei
15 > # from here cullpdb20
16   7ODC    A
17   1WB4    A
18   2H6F    B
# Line 56 | Line 69
69   1FO8    A
70   2BVR    L
71   1MJ4    A
72 < 2DKO    B
72 > #2DKO   B # removed from test set because it has an unusual non-peptide linked compound in a peptide (introduced in remediation of July 2011)
73   2EB4    A
74   1GK9    B
75   2DE3    A
# Line 274 | Line 287
287   2DT8    A
288   1JFB    A
289   2DG5    B
290 < 2HAL    A
290 > #2HAL   A # removed from test set because it has an unusual non-peptide linked compound in a peptide (introduced in remediation of July 2011)
291   2OFC    A
292   2FCJ    A
293   1IE9    A
# Line 752 | Line 765
765   2HX0    A
766   2P9W    A
767   1QWN    A
768 < 2BO9    B
768 > #2BO9   B # won't pass the pdb file to pdbase test comparison for chain names because (weirdly) a non-poly chain is embedded between 2 poly chains in the PDB file producing a different chain codes mapping
769   1WCK    A
770   1VCC    A
771   1M0K    A

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