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Author: lpetzo
Date: Wed Nov 7 17:32:43 2007 UTC (14 years, 9 months ago)
Log Message:
- FileFormatError
- FastaFileFormatError
- PirFileFormatError
- AlignmentConstructionError

class Alignment:
- introduced new exceptions to be throw whenever file format error have been detected or any other construction errors occur
- changed accession rules of function getGapCharacter from "public" to "public static"
- new functions:
 * writeFasta
class CiffileFormatError:
- changed super class from Exception to the new FileFormatError class

class GraphFileFormatError:
- s. class CiffileFormatError

class PairwiseAlignmentConverter:
- added exception handling features due to class Alignment

class PairwiseAlignmentGraphConverter:
- s. class PairwiseAlignmentConverter

class PdbFileFormatError:
- s. class CifffileFormatError

Changed paths