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Main.HomePage History
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June 10, 2009, at 01:09 AM
by 133.1.158.101 -
Changed line 19 from:
The web-based prediction service will be available soon at to:
The web-based prediction service is available at June 09, 2009, at 11:45 PM
by 133.1.158.101 -
Changed line 19 from:
The web-based prediction service will be soon available at to:
The web-based prediction service will be available soon at June 09, 2009, at 11:45 PM
by 133.1.158.101 -
Changed lines 1-2 from:
[++ CRNPRED: a software for accurate prediction of 1D protein structures. ++]
to:
!! CRNPRED: a software for accurate prediction of 1D protein structures.
Changed lines 17-18 from:
[++ Prediction Web Server ++]
The web-based prediction service will be soon available at %newwin% http://crnpred.pdbj.org/ to:
!! Prediction Web Server
The web-based prediction service will be soon available at
* [++ %newwin% http://crnpred.pdbj.org/ ++] June 09, 2009, at 11:42 PM
by 133.1.158.101 -
Added line 17:
[++ Prediction Web Server ++] June 09, 2009, at 10:47 PM
by 133.1.158.101 - new web server crnpred.pdbj.org
Changed line 17 from:
The web-based prediction service is available at %newwin% http://crnpred.genes.nig.ac.jp/crnpred/index.html (Not maintained...) to:
The web-based prediction service will be soon available at %newwin% http://crnpred.pdbj.org/ January 29, 2007, at 09:44 PM
by akinjo -
Changed line 17 from:
The web-based prediction service is available at %newwin% http://crnpred.genes.nig.ac.jp/crnpred/index.html . to:
The web-based prediction service is available at %newwin% http://crnpred.genes.nig.ac.jp/crnpred/index.html (Not maintained...) November 07, 2006, at 08:41 PM
by 133.1.158.101 - BMC bi paper updated.
Changed lines 11-13 from:
The paper describing the software has been submitted:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006) [[http://uk.arxiv.org/abs/q-bio.BM/0604013|preprint]]
to:
The paper describing the software has been published as:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''BMC Bioinformatics'' '''7''':401 (2006) [[http://dx.doi.org/10.1186/1471-2105-7-401 | doi:10.1186/1471-2105-7-401]]
May 02, 2006, at 04:46 AM
by 133.39.116.42 -
Changed lines 12-13 from:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006) [[http://arxiv.org/abs/q-bio.BM/0604013|preprint]]
to:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006) [[http://uk.arxiv.org/abs/q-bio.BM/0604013|preprint]]
April 14, 2006, at 04:20 AM
by 133.39.116.42 -
Changed line 17 from:
The web-based prediction service is available at http://crnpred.genes.nig.ac.jp/crnpred/index.html . to:
The web-based prediction service is available at %newwin% http://crnpred.genes.nig.ac.jp/crnpred/index.html . April 13, 2006, at 08:49 PM
by 133.39.116.42 -
Changed line 17 from:
The current official page is http://crnpred.genes.nig.ac.jp/crnpred/index.html where web-based prediction service is also provided. to:
The web-based prediction service is available at http://crnpred.genes.nig.ac.jp/crnpred/index.html . April 12, 2006, at 10:31 PM
by 133.39.116.42 -
Changed lines 12-13 from:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006)
to:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006) [[http://arxiv.org/abs/q-bio.BM/0604013|preprint]]
April 11, 2006, at 10:49 PM
by 133.39.116.42 -
Changed line 14 from:
CRNPRED predicts 3 types of 1D structures: SS, CN, and RWCO. To find out why these 3 types, refer to to:
CRNPRED predicts 3 types of 1D structures: SS, CN, and RWCO. To find out why these 3 types are of interest, refer to April 11, 2006, at 09:16 PM
by 133.39.116.42 -
Changed lines 15-16 from:
* A.R. Kinjo and K. Nishikawa, '''Recoverable one-dimensional encoding of three-dimensional protein structures''', ''Bioinformatics'', '''21''':2167-2170 (2005) [[http://dx.doi.org/10.1093/bioinformatics/bti330 | doi:10.1093/bioinformatics/bti330]]
to:
* A.R. Kinjo and K. Nishikawa, '''Recoverable one-dimensional encoding of three-dimensional protein structures''' ''Bioinformatics'', '''21''':2167-2170 (2005) [[http://dx.doi.org/10.1093/bioinformatics/bti330 | doi:10.1093/bioinformatics/bti330]]
April 11, 2006, at 09:14 PM
by 133.39.116.42 -
Changed line 14 from:
CRNPRED predicts the 3 types of 1D structures: SS, CN, and RWCO. To find out why these 3 types, refer to to:
CRNPRED predicts 3 types of 1D structures: SS, CN, and RWCO. To find out why these 3 types, refer to April 11, 2006, at 09:12 PM
by 133.39.116.42 -
Changed lines 15-17 from:
* A.R. Kinjo and K. Nishikawa, '''Recoverable one-dimensional encoding of three-dimensional protein structures''', ''Bioinformatics'', '''21''':2167-2170 (2005)
[[http://dx.doi.org/10.1093/bioinformatics/bti330 | doi:10.1093/bioinformatics/bti330]]
to:
* A.R. Kinjo and K. Nishikawa, '''Recoverable one-dimensional encoding of three-dimensional protein structures''', ''Bioinformatics'', '''21''':2167-2170 (2005) [[http://dx.doi.org/10.1093/bioinformatics/bti330 | doi:10.1093/bioinformatics/bti330]]
April 11, 2006, at 09:11 PM
by 133.39.116.42 -
Added lines 14-17:
CRNPRED predicts the 3 types of 1D structures: SS, CN, and RWCO. To find out why these 3 types, refer to
* A.R. Kinjo and K. Nishikawa, '''Recoverable one-dimensional encoding of three-dimensional protein structures''', ''Bioinformatics'', '''21''':2167-2170 (2005)
[[http://dx.doi.org/10.1093/bioinformatics/bti330 | doi:10.1093/bioinformatics/bti330]]
April 11, 2006, at 08:45 PM
by 133.39.116.42 -
Changed lines 12-13 from:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Hihgly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006)
to:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Highly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006)
April 11, 2006, at 08:34 PM
by 133.39.116.42 -
Changed lines 9-10 from:
* A.R. Kinjo and K. Nishikawa, Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structure from amino acid sequence using critical random networks. ''BIOPHYSICS'', '''1''':67-74 (2005) [[http://dx.doi.org/10.2142/biophysics.1.67 | doi:10.2142/biophysics.1.67]]
to:
* A.R. Kinjo and K. Nishikawa, '''Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structure from amino acid sequence using critical random networks''' ''BIOPHYSICS'', '''1''':67-74 (2005) [[http://dx.doi.org/10.2142/biophysics.1.67 | doi:10.2142/biophysics.1.67]]
Changed lines 12-13 from:
* A.R. Kinjo and K. Nishikawa, CRNPRED: Hihgly accurate prediction of one-dimensional protein structures by large-scale critical random networks. ''submitted'' (2006)
to:
* A.R. Kinjo and K. Nishikawa, '''CRNPRED: Hihgly accurate prediction of one-dimensional protein structures by large-scale critical random networks''' ''submitted'' (2006)
April 11, 2006, at 08:32 PM
by 133.39.116.42 -
Deleted line 8:
April 11, 2006, at 08:32 PM
by 133.39.116.42 -
Changed lines 12-14 from:
to:
The paper describing the software has been submitted:
* A.R. Kinjo and K. Nishikawa, CRNPRED: Hihgly accurate prediction of one-dimensional protein structures by large-scale critical random networks. ''submitted'' (2006)
April 11, 2006, at 08:28 PM
by 133.39.116.42 -
Changed lines 10-14 from:
* A.R. Kinjo and K. Nishikawa,
Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structure from amino acid sequence using critical random networks.
''BIOPHYSICS'', '''1''':67-74 (2005) [[http://dx.doi.org/10.2142/biophysics.1.67 | doi:10.2142/biophysics.1.67]]
to:
* A.R. Kinjo and K. Nishikawa, Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structure from amino acid sequence using critical random networks. ''BIOPHYSICS'', '''1''':67-74 (2005) [[http://dx.doi.org/10.2142/biophysics.1.67 | doi:10.2142/biophysics.1.67]]
April 11, 2006, at 08:28 PM
by 133.39.116.42 -
Changed line 10 from:
A.R. Kinjo and K. Nishikawa, to:
* A.R. Kinjo and K. Nishikawa, April 11, 2006, at 01:12 AM
by 133.39.116.42 -
Changed lines 3-4 from:
CRNPRED is a program that predicts secondary structures (SS), contact numbers (CN), and residue-wise contact orders of a native protein structure from its amino acid sequence.
to:
CRNPRED is a program that predicts secondary structures (SS), contact numbers (CN), and residue-wise contact orders (RWCO) of a native protein structure from its amino acid sequence.
April 11, 2006, at 12:42 AM
by 133.39.116.42 -
Changed line 15 from:
The current official page is http://crnpred.genes.nig.ac.jp/crnpred/index.html to:
The current official page is http://crnpred.genes.nig.ac.jp/crnpred/index.html where web-based prediction service is also provided. April 11, 2006, at 12:41 AM
by 133.39.116.42 -
Changed lines 1-15 from:
[++ CRNPRED: a software for accurate prediction of 1D protein structures. ++] to:
[++ CRNPRED: a software for accurate prediction of 1D protein structures. ++]
CRNPRED is a program that predicts secondary structures (SS), contact numbers (CN), and residue-wise contact orders of a native protein structure from its amino acid sequence.
The prediction scheme uses an output of PSI-BLAST (sequence profile), and is based on
a novel machine learning technique called Critical Random Networks.
For the methodology, refer to the following paper:
A.R. Kinjo and K. Nishikawa,
Predicting secondary structures, contact numbers, and residue-wise contact orders of native protein structure from amino acid sequence using critical random networks.
''BIOPHYSICS'', '''1''':67-74 (2005) [[http://dx.doi.org/10.2142/biophysics.1.67 | doi:10.2142/biophysics.1.67]]
The current official page is http://crnpred.genes.nig.ac.jp/crnpred/index.html April 11, 2006, at 12:30 AM
by 133.39.116.42 -
Added line 1:
[++ CRNPRED: a software for accurate prediction of 1D protein structures. ++]
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