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## Package org.metaqtl.main

Class Summary
A2Xml |
CmdLineParser | Largely GNU-compatible command-line options parser.
CmdLineParser.Option | Representation of a command-line option
CmdLineParser.Option.BooleanOption |
CmdLineParser.Option.DoubleOption | An option that expects a floating-point value
CmdLineParser.Option.IntegerOption | An option that expects an integer value
CmdLineParser.Option.LongOption | An option that expects a long integer value
CmdLineParser.Option.StringOption | An option that expects a string value
ConsMap |
InfoMap |
MapView |
MetaDB |
MetaMain |
MMapView |
MQTLView |
QTLClust |
QTLClustInfo |
QTLModel |
QTLProj |
QTLTree |
Xml2A |

Exception Summary
CmdLineParser.IllegalOptionValueException | Thrown when an illegal or missing value is given by the user for an option that takes a value.
CmdLineParser.NotFlagException | Thrown when the parsed commandline contains multiple concatenated short options, such as -abcd, where one or more requires a value.
CmdLineParser.OptionException | Base class for exceptions that may be thrown when options are parsed
CmdLineParser.UnknownOptionException | Thrown when the parsed command-line contains an option that is not recognised.
CmdLineParser.UnknownSuboptionException | Thrown when the parsed commandline contains multiple concatenated short options, such as -abcd, where one is unknown.

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