org.metaqtl.algo
Class CMSAlgorithm

java.lang.Object
  org.metaqtl.algo.CMSAlgorithm

public final class CMSAlgorithm
extends java.lang.Object

Use this class to find common marker sequences between two chromosomes.

See Also:

Chromosome, CMarkerSequence

Constructor Summary

CMSAlgorithm()

Method Summary

static CMarkerSequence

run(Chromosome chrom1, Chromosome chrom2) This methods find the common marker sequences between the two given chromosomes.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CMSAlgorithm

public CMSAlgorithm()

Method Detail

run

public static CMarkerSequence run(Chromosome chrom1,
                                  Chromosome chrom2)

This methods find the common marker sequences between the two given chromosomes.

Parameters:

chrom1 - the first Chromosome.

chrom2 - the second Chromosome.

Returns:

a CMarkerSequence