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| Classes in org.sStu used by org.sStu | |
| Aligner
Implements abstract aligner. |
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| Alignment
Represents the alignment. |
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| AlignmentRangeAligner
Defines a most comprehensive (but slowest) alingner able to return the range of suboptimal alignments when required. |
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| CharComparator
Class for comparing two characters in the sequence. |
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| ScoreOnlyAligner
Defines an aligner that returns the score of the best alignment only. |
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| SingleAlingmentAligner
Defines an aligner that returns one (best) alignment and its score. |
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