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  • Gene Prediction Data Consortium - Downloads

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 1, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Features of the same type are all contained in a single (multi-) FASTA file. Genes were rendered non-redundant via BLAST (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 2, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 3, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 4, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 5, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 6, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 7, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 8, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 9, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 10, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 11, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 12, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 13, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 14, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 15, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 16, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 17, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 18, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 19, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 20, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 21, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome 22, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome X, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

    human-NCBI35 1.0 (tar/gz)

    Release notes:

    Human chromosome Y, NCBI release 35. Inludes exons (split into initial/internal/final), splice sites (donor/acceptor), start/stop codons, introns, UTR (50bp upstream/downstream from start/stop codon), intergenic (1000bp before/after UTR), all in FASTA format. Features of the same type are all contained in a single (multi-) FASTA file. Splice sites and start/stop codons include a margin of 80bp on either side of the signal consensus. Genes were rendered non-redundant via BLASTN (rule: 80% identity over 80% of length). Overlapping genes and genes having multiple isoforms were also removed.


    Changelog:

     

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