Ebbie by H. Alexander Ebhardt

Release 3.0.9: Feb 28, 2005
- increased functionality of Lost&Found function by adding AND / OR BOOLEAN operators
- installed Ebbie on http://bioinformatics.org/ebbie
- created secure login to Ebbie, each login only one database.

Release 3.0.8: Dec 04, 2005
- implement Lost&Found function
- prevent wildcard character from being used for Annotation Change
- prevent wildcard characters from beining used for primer sequences
- ensure only ACGT are in 5-CP and 3-CP
- separate pull down menus for each database
- make filenames more userfriendly (add devider btw filename+dbname)
- counts length of 3-CP and 5-CP

Release 3.0.7: Nov 18, 2005
- Database Management Tool: Change Annotation: now can search for Number and Id. Id important, because BlastN search 
gives only Id. From View All its easier to remember the number. Now both searches possilbe.
- implemented 3rd database, made changes to blast subroutines (each db has their own temp file now)
- html design more space filling and consistent. 

Release 3.0.6: Nov 16, 2005
- Database Management Tool: View All: pull-down menu "remembers" last selection. Each database has its own "memory".
- Clarified some comments.
- found a bug (database information was lost; dead end script): fixed it.

Release 3.0.5: Nov 15, 2005
- implemented logbook: it will log date, filename and comments (no insert found, single insert found, multiple 
inserts found, uneven primer pairs)
- grammar and spelling corrected
- change annotation search for id to search entry number...done
- expanded automatic sample source determination algroithm: if file starts with any number btw 1 and 9 it will 
automatically assign sample source/origin. (used all current sequenced genomes)
- found a bug (database information was lost; dead end script): fixed it.

Release 3.0.4: Nov 11, 2005
- each database has now their own cloning primer sets
- make selection of database before starting Ebbie and use the same database throughout
- if no database was selected, error message prints
- change html-end to srna.mbb.sfu.ca (at the bottom of table)
- add MainPageButton to annorev.cgi
- BlastN searches: automatic, no checkboxes for user
- tables are now always displaying border around each field (just looks nicer).

Release 3.0.3: Nov 01, 2005
- checks that number of primers in the sequencing file is even, otherwise an error message is displayed
- primers and input sequencing file are case insensitive; everything is capitalized automatically.
- when multiple inserts are found, the pull down menu displays the RNA's id now (instead of a counter)
- changed wording to: "Sorry, there was no insert found."

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pico