edu.hust.go.term
Class OboXmlGo_term

java.lang.Object
  |
  +--edu.hust.go.term.DefaultGO_term
        |
        +--edu.hust.go.term.OboXmlGo_term
All Implemented Interfaces:
java.lang.Cloneable, GO_term

public class OboXmlGo_term
extends DefaultGO_term


Nested Class Summary
(package private)  class OboXmlGo_term.Def
           
(package private)  class OboXmlGo_term.Synonym
           
 
Field Summary
(package private)  java.util.Vector alt_id
           
(package private)  java.lang.String comment
           
(package private)  OboXmlGo_term.Def definition
           
(package private)  java.util.Vector intersection_of
           
(package private)  boolean is_anonymous
           
(package private)  boolean is_obsolete
           
(package private)  boolean is_root
           
(package private)  java.lang.String lexical_category
           
(package private)  java.lang.String namespace
           
(package private)  java.util.Vector relationship
           
(package private)  java.util.Vector subset
           
(package private)  java.util.Vector synonym
           
(package private)  java.util.Vector union_of
           
(package private)  java.util.Vector xref_analog
           
(package private)  java.util.Vector xref_unknown
           
 
Fields inherited from class edu.hust.go.term.DefaultGO_term
def, id, is_a, name, part_of
 
Constructor Summary
OboXmlGo_term(org.w3c.dom.Document doc)
           
 
Method Summary
 java.util.Vector getAlt_id()
           
 java.lang.String getComment()
           
 OboXmlGo_term.Def getDefinition()
           
 java.util.Vector getIntersection_of()
           
 java.lang.String getLexical_category()
           
 java.lang.String getNamespace()
           
 java.util.Vector getRelationship()
           
 java.util.Vector getSubset()
           
 java.util.Vector getSynonym()
           
 java.util.Vector getUnion_of()
           
 java.util.Vector getXref_analog()
           
 java.util.Vector getXref_unknown()
           
 boolean isIs_anonymous()
           
 boolean isIs_obsolete()
           
 boolean isIs_root()
           
(package private)  boolean setBool(org.w3c.dom.Document doc, CachedXPathAPI xpath, java.lang.String xqueryStr)
           
(package private)  java.util.Vector setRelationship(org.w3c.dom.Document doc, CachedXPathAPI xpath, java.lang.String xqueryStr)
           
(package private)  java.util.Vector setSynonym(org.w3c.dom.Document doc, CachedXPathAPI xpath)
           
(package private)  java.util.Vector setVector(org.w3c.dom.Document doc, CachedXPathAPI xpath, java.lang.String xqueryStr)
           
(package private)  java.util.Vector setXref(org.w3c.dom.NodeList nodeList, CachedXPathAPI xpath)
           
 
Methods inherited from class edu.hust.go.term.DefaultGO_term
getDef, getId, getIs_a, getName, getPart_of, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Field Detail

namespace

java.lang.String namespace

definition

OboXmlGo_term.Def definition

alt_id

java.util.Vector alt_id

subset

java.util.Vector subset

comment

java.lang.String comment

is_anonymous

boolean is_anonymous

is_obsolete

boolean is_obsolete

is_root

boolean is_root

xref_analog

java.util.Vector xref_analog

xref_unknown

java.util.Vector xref_unknown

synonym

java.util.Vector synonym

relationship

java.util.Vector relationship

intersection_of

java.util.Vector intersection_of

union_of

java.util.Vector union_of

lexical_category

java.lang.String lexical_category
Constructor Detail

OboXmlGo_term

public OboXmlGo_term(org.w3c.dom.Document doc)
              throws javax.xml.transform.TransformerException
Method Detail

setVector

java.util.Vector setVector(org.w3c.dom.Document doc,
                           CachedXPathAPI xpath,
                           java.lang.String xqueryStr)
                     throws javax.xml.transform.TransformerException
javax.xml.transform.TransformerException

setBool

boolean setBool(org.w3c.dom.Document doc,
                CachedXPathAPI xpath,
                java.lang.String xqueryStr)
          throws javax.xml.transform.TransformerException
javax.xml.transform.TransformerException

setXref

java.util.Vector setXref(org.w3c.dom.NodeList nodeList,
                         CachedXPathAPI xpath)
                   throws javax.xml.transform.TransformerException
javax.xml.transform.TransformerException

setSynonym

java.util.Vector setSynonym(org.w3c.dom.Document doc,
                            CachedXPathAPI xpath)
                      throws javax.xml.transform.TransformerException
javax.xml.transform.TransformerException

setRelationship

java.util.Vector setRelationship(org.w3c.dom.Document doc,
                                 CachedXPathAPI xpath,
                                 java.lang.String xqueryStr)
                           throws javax.xml.transform.TransformerException
javax.xml.transform.TransformerException

getAlt_id

public java.util.Vector getAlt_id()

getComment

public java.lang.String getComment()

getDefinition

public OboXmlGo_term.Def getDefinition()

getIntersection_of

public java.util.Vector getIntersection_of()

isIs_anonymous

public boolean isIs_anonymous()

isIs_obsolete

public boolean isIs_obsolete()

isIs_root

public boolean isIs_root()

getLexical_category

public java.lang.String getLexical_category()

getRelationship

public java.util.Vector getRelationship()

getNamespace

public java.lang.String getNamespace()

getSubset

public java.util.Vector getSubset()

getSynonym

public java.util.Vector getSynonym()

getUnion_of

public java.util.Vector getUnion_of()

getXref_analog

public java.util.Vector getXref_analog()

getXref_unknown

public java.util.Vector getXref_unknown()