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## U

unit - Variable in class org.metaqtl.Qtl.QTLTrait
  The unit of the trait.
UNKNOWN - Static variable in interface org.thalia.bio.IBioCrossTypes
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.BioEntityFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.BioEntityFactory
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.MapChartFactory
  TODO (non-Javadoc)
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.MapChartFactory
  TODO (non-Javadoc)
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.MapMakerFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.MapMakerFactory
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.MapRawFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.MapRawFactory
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.MapTabFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.MapTabFactory
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.OntologyTabFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.OntologyTabFactory
unload(IBioEntity, OutputStream) - Method in class org.thalia.bio.entity.factory.XmlBioEntityFactory
unload(IBioEntity, Writer) - Method in class org.thalia.bio.entity.factory.XmlBioEntityFactory
update(Reader) - Static method in class org.metaqtl.factory.MetaGraphParFactory
updateLeafIdx(int[]) - Method in class org.metaqtl.Tree
updateLoglikelihood(double[], double[], EMResult) - Static method in class org.metaqtl.algo.EMAlgorithm
  Updates the loglikelihood value.
updateMappingContext(int, int) - Method in class org.metaqtl.Chromosome
  Updates the mapping context of the chromosome.
updateMuVector(double[], double[], EMResult) - Static method in class org.metaqtl.algo.EMAlgorithm
  Updates the vector of mixture components and returns the new values.
updatePiVector(EMResult) - Static method in class org.metaqtl.algo.EMAlgorithm
  Updates the vector of mixture mixings and returns the new values.
updateZMatrix(double[], double[], EMResult) - Static method in class org.metaqtl.algo.EMAlgorithm
  Updates the Z matrix.

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