org.metaqtl.adapter
Class QtlPartitionAdapter

java.lang.Object
  org.metaqtl.adapter.QtlPartitionAdapter

public class QtlPartitionAdapter
extends java.lang.Object

This class defines some methods to adapt complient objects into a QtlPartition object.

Constructor Summary

QtlPartitionAdapter()

Method Summary

static QtlPartition	adapt(MetaQtlAnalysis analysis, java.lang.String chrom, java.lang.String trait, int k) Adapt the MetaQtlAnalysis analysis for a given value of the number of clusters k and a given trait name code.
static QtlPartition	adapt(MetaQtlData qtlData) Adapt the given MetaQtlData into a QtlPartition and returns it.
static QtlPartition	adapt(MetaQtlResult result, Qtl[] qtls, int k)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

QtlPartitionAdapter

public QtlPartitionAdapter()

Method Detail

adapt

public static QtlPartition adapt(MetaQtlData qtlData)

Adapt the given MetaQtlData into a QtlPartition and returns it.

Parameters:

qtlData - the MetaQtlData instance to adapt.

Returns:

a new instance of QtlPartition.

adapt

public static QtlPartition adapt(MetaQtlAnalysis analysis,
                                 java.lang.String chrom,
                                 java.lang.String trait,
                                 int k)

Adapt the MetaQtlAnalysis analysis for a given value of the number of clusters k and a given trait name code. into a new instance of QtlPartition.

Parameters:

result - a meta-analysis result.

k - the number of clusters.

Returns:

a new instance of QtlPartition with as many partitions as the value of k.

adapt

public static QtlPartition adapt(MetaQtlResult result,
                                 Qtl[] qtls,
                                 int k)