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BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1R8DZD016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|1-99
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   141    5e-31
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   141    5e-31
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   133    1e-28
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   125    3e-26
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   125    3e-26
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   125    3e-26
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   117    8e-24
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   101    5e-19
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   101    5e-19
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   101    5e-19
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   101    5e-19
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...  97.6    7e-18
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...  93.7    1e-16
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...  93.7    1e-16
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...  85.7    3e-14
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...  65.9    3e-08
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  63.9    1e-07
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  61.9    4e-07
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  61.9    4e-07
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  46.1    0.024
ref|XM_001709526.1|  Giardia lamblia ATCC 50803 DNA-directed R...  40.1    1.5  
ref|XM_001586805.1|  Sclerotinia sclerotiorum 1980 hypothetica...  40.1    1.5  
ref|XM_362569.2|  Magnaporthe grisea 70-15 hypothetical protei...  40.1    1.5  
gb|DQ482043.1|  Bactrocera dorsalis microsatellite Bd85B sequence  40.1    1.5  
gb|AC092478.2|  Sus scrofa clone RP44-360A14, complete sequence    40.1    1.5  
emb|AL606515.4|  Human DNA sequence from clone RP11-575K24 on ...  40.1    1.5  
gb|S58504.1|  NS5=44.2 kda protein {RNA5} [maize stripe virus ...  40.1    1.5  
emb|X60325.1|GLRPOA3  G.lamblia rpoA3 gene for subunit A of DN...  40.1    1.5  
gb|L13446.1|MZSNSRNA5P  Maize stripe virus nonstructural prote...  40.1    1.5  
emb|CU468218.7|  Wallaby DNA sequence from clone MEKBa-34H17, ...  38.2    5.9  
gb|AC202838.3|  MACACA MULATTA BAC clone CH250-381I8 from chro...  38.2    5.9  
gb|AC215550.4|  Macaca mulatta  BAC CH250-122N22 (Children's H...  38.2    5.9  
gb|AE014297.2|  Drosophila melanogaster chromosome 3R, complet...  38.2    5.9  
gb|AC160761.6|  Mus musculus BAC clone RP24-163J22 from chromo...  38.2    5.9  
gb|AC009388.5|  Drosophila melanogaster clone BACR11P22, compl...  38.2    5.9  
gb|AC167198.8|  Mus musculus chromosome 3, clone RP23-409M14, ...  38.2    5.9  
ref|NM_170361.1|  Drosophila melanogaster CG5514 CG5514-RA, tr...  38.2    5.9  
ref|NM_143342.1|  Drosophila melanogaster CG5514 CG5514-RB, tr...  38.2    5.9  
gb|AC127390.4|  Homo sapiens BAC clone RP11-361H16 from 4, com...  38.2    5.9  
emb|AL356234.18|  Human DNA sequence from clone RP11-95M15 on ...  38.2    5.9  
gb|AY119485.1|  Drosophila melanogaster GH07623 full insert cDNA   38.2    5.9  
emb|AL356094.11|  Human DNA sequence from clone RP11-64I5 on c...  38.2    5.9  
gb|AC153138.3|  Mus musculus BAC clone RP23-442K7 from chromos...  38.2    5.9  
emb|CR380957.1|  Candida glabrata strain CBS138 chromosome K c...  38.2    5.9  
ref|XM_448293.1|  Candida glabrata CBS138, CAGL0K01573g partia...  38.2    5.9  
emb|BX005201.7|  Zebrafish DNA sequence from clone CH211-129C2...  38.2    5.9  
gb|AC115071.9|  Mus musculus chromosome 3, clone RP24-408F11, ...  38.2    5.9  
emb|AL732494.16|  Mouse DNA sequence from clone RP23-322L22 on...  38.2    5.9  
gb|AC150903.2|  Mus musculus BAC clone RP23-35B12 from chromos...  38.2    5.9  
emb|AL671492.12|  Mouse DNA sequence from clone RP23-286H11 on...  38.2    5.9  
emb|AL772366.7|  Mouse DNA sequence from clone RP23-171C7 on c...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
           |||||||||||||||||||||||||||||||||||||||
Sbjct  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
            |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct  29   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAAAAAGATAAGATCAAAGAGGCC  88

Query  61   CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
             | |||||||| ||||||||| |||||||||||||||||
Sbjct  89   AAAGAGCAGTCAATGCAACAACAGCAAGCAAGGAACAAA  127


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
            |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct  29   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAAAAAGATAAGATCAAAGAGGCC  88

Query  61   CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
             | |||||||| ||||||||| |||||||||||||||||
Sbjct  89   AAAGAGCAGTCAATGCAACAACAGCAAGCAAGGAACAAA  127


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 85/91 (93%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAAAAAGATAAGATCAAAGACGCC  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | |||||||| |||||||||||||||||||
Sbjct  61  AAAGAGCAGTCAATGCAACAAAAGCAAGCAA  91


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| | ||||||||||| || |||||||||||||| |||
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGACGCAGGCAAGGAAAAAGATAAGATCAAAGACGCC  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
            |||||||||| |||||||||||||||| || |||||||
Sbjct  61  AAGGAGCAGTCAATGCAACAAAAGCAAGAAAAGAACAAA  99


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 84/91 (92%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  9    AAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCA  68
            |||||||||||||||| ||||||||||||| || |||||||||||||| ||| | |||||
Sbjct  12   AAAGGACAAAGAATTGGATGCAGGCAAGGAAAAAGATAAGATCAAAGAGGCCAAAGAGCA  71

Query  69   GTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
            ||| |||||||||||||||||||||||||||
Sbjct  72   GTCAATGCAACAAAAGCAAGCAAGGAACAAA  102


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 84/91 (92%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct  4   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAAAAAGATAAGATCAAAGACGCC  63

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | ||||||||  ||||||||||||||||||
Sbjct  64  AAAGAGCAGTCTGTGCAACAAAAGCAAGCAA  94


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| | ||||||||||| || |||||||||||||| |||
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGACGCAGGCAAGGAAAAAGATAAGATCAAAGACGCC  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
            | |||||||| |||||||| |||||||||| |||||||
Sbjct  61  AAAGAGCAGTCAATGCAACAGAAGCAAGCAAAGAACAAA  99


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 81/91 (89%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| ||||||||||||| ||||| |||  ||||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGATGCAGGCAAGGATAAGGAAAAGGACAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | ||||||||  ||||||||||||||||||
Sbjct  61  AAAGAGCAGTCAGTGCAACAAAAGCAAGCAA  91


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 81/91 (89%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           ||||||||||||||||||||||||||||||||| |||| || || |||||||| ||||||
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCCAGGAAAAAGACAAGATCAAGGAAGCC  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | || ||||| |||||||||| ||||||||
Sbjct  61  AAAGAACAGTCAATGCAACAAACGCAAGCAA  91


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 87/99 (87%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||||||||||||||||| || |||||||  |||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGACAAAGATAAGAAGAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
            | ||||| ||  ||||||| |||||||||| |||||||
Sbjct  61  AAAGAGCAATCCGTGCAACAGAAGCAAGCAAAGAACAAA  99


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 81/91 (89%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| | ||||||||||| || |||||||||||||| |||
Sbjct  4   TCTGATGGAAAGGACAAAGAATTGGACGCAGGCAAGGAAAAAGATAAGATCAAAGACGCC  63

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | |||||||   ||||||||||||||||||
Sbjct  64  AAAGAGCAGTTAGTGCAACAAAAGCAAGCAA  94


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score = 97.6 bits (49),  Expect = 7e-18
 Identities = 79/89 (88%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| ||||||| ||||| || |||||| |||||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGATGCAGGTAAGGATAAAGATAAGGTCAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGC  89
            | |||||||| | |||||||||||||||
Sbjct  61  AAAGAGCAGTCAAGGCAACAAAAGCAAGC  89


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 80/91 (87%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| ||||||||||||| || || |||  ||||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGATGCAGGCAAGGATAAAGAAAAGGACAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | ||||||||  ||||||||||||||||||
Sbjct  61  AAAGAGCAGTCAGTGCAACAAAAGCAAGCAA  91


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 80/91 (87%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| ||||||||||||| || || |||  ||||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGATGCAGGCAAGGATAAAGAAAAGGACAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | ||||||||  ||||||||||||||||||
Sbjct  61  AAAGAGCAGTCAGTGCAACAAAAGCAAGCAA  91


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 79/91 (86%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||||||| ||||||| ||||| || || |||  ||||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAATTGGATGCAGGTAAGGATAAAGAAAAGGACAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAA  91
            | ||||||||  ||||||||||||||||||
Sbjct  61  AAAGAGCAGTCAGTGCAACAAAAGCAAGCAA  91


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 75/89 (84%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           ||||||||||||||||||| |||  ||||||||||||| || || |||  ||||||||  
Sbjct  1   TCTGATGGAAAGGACAAAGGATTAGATGCAGGCAAGGATAAAGAAAAGGACAAAGAAGGT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGC  89
            | ||||||||  ||||||||||||||||
Sbjct  61  AAAGAGCAGTCAGTGCAACAAAAGCAAGC  89


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 62/72 (86%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  28   GCAGGCAAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAA  87
            |||||||||||||| |||||| ||||||| ||  ||||||| ||  ||||||| ||||||
Sbjct  488  GCAGGCAAGGAGAAAGATAAGGTCAAAGACGCTAAGGAGCAATCCGTGCAACAGAAGCAA  547

Query  88   GCAAGGAACAAA  99
            |||| |||||||
Sbjct  548  GCAAAGAACAAA  559


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 82/99 (82%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1   TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
           |||||||||||||||||||| ||| | ||||||||||| || || |||   |||||||| 
Sbjct  1   TCTGATGGAAAGGACAAAGAGTTGGACGCAGGCAAGGACAAAGAAAAGGAGAAAGAAGCT  60

Query  61  CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
            | ||||| ||  ||||||| |||||||||| |||||||
Sbjct  61  AAAGAGCAATCCGTGCAACAGAAGCAAGCAAAGAACAAA  99


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 82/99 (82%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TCTGATGGAAAGGACAAAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCC  60
            |||||||||||||||||||| ||| | ||||||||||| || || |||   |||||||| 
Sbjct  13   TCTGATGGAAAGGACAAAGAGTTGGACGCAGGCAAGGACAAAGAAAAGGAGAAAGAAGCT  72

Query  61   CAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAA  99
             | ||||| ||  ||||||| |||||||||| |||||||
Sbjct  73   AAAGAGCAATCCGTGCAACAGAAGCAAGCAAAGAACAAA  111


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 68/83 (81%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  17   AAGAATTGAATGCAGGCAAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGC  76
            |||||||| ||||||||||||| || || |||   |||| | || | |||||||| |  |
Sbjct  260  AAGAATTGGATGCAGGCAAGGACAAAGACAAGGATAAAGGAACCAAAGAGCAGTCCACAC  319

Query  77   AACAAAAGCAAGCAAGGAACAAA  99
            |||| ||||||||||||||||||
Sbjct  320  AACAGAAGCAAGCAAGGAACAAA  342


>ref|XM_001709526.1| Giardia lamblia ATCC 50803 DNA-directed RNA polymerase subunit 
A' (GL50803_16223) partial mRNA
Length=5226

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  50   TCAAAGAAGCCCAGGAGCAG  69
            ||||||||||||||||||||
Sbjct  440  TCAAAGAAGCCCAGGAGCAG  459


>ref|XM_001586805.1| Sclerotinia sclerotiorum 1980 hypothetical protein (SS1G_11884) 
partial mRNA
Length=1812

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  30    AGGCAAGGAGAAGGATAAGA  49
             ||||||||||||||||||||
Sbjct  1686  AGGCAAGGAGAAGGATAAGA  1705


>ref|XM_362569.2| Magnaporthe grisea 70-15 hypothetical protein (MGG_08152) partial 
mRNA
Length=1221

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  25   AATGCAGGCAAGGAGAAGGA  44
            ||||||||||||||||||||
Sbjct  315  AATGCAGGCAAGGAGAAGGA  334


>gb|DQ482043.1| Bactrocera dorsalis microsatellite Bd85B sequence
Length=232

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  76   CAACAAAAGCAAGCAAGGAA  95
            ||||||||||||||||||||
Sbjct  163  CAACAAAAGCAAGCAAGGAA  144


>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence
Length=161008

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  34     AAGGAGAAGGATAAGATCAA  53
              ||||||||||||||||||||
Sbjct  35872  AAGGAGAAGGATAAGATCAA  35891


>emb|AL606515.4| Human DNA sequence from clone RP11-575K24 on chromosome X, complete 
sequence
Length=39017

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  43    GATAAGATCAAAGAAGCCCA  62
             ||||||||||||||||||||
Sbjct  6705  GATAAGATCAAAGAAGCCCA  6724


>gb|S58504.1| NS5=44.2 kda protein {RNA5} [maize stripe virus MStV, Genomic 
RNA, 1317 nt]
Length=1317

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  37    GAGAAGGATAAGATCAAAGA  56
             ||||||||||||||||||||
Sbjct  1065  GAGAAGGATAAGATCAAAGA  1084


>emb|X60325.1|GLRPOA3 G.lamblia rpoA3 gene for subunit A of DNA dependent RNA polymerase 
III
Length=8333

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  50    TCAAAGAAGCCCAGGAGCAG  69
             ||||||||||||||||||||
Sbjct  3451  TCAAAGAAGCCCAGGAGCAG  3470


>gb|L13446.1|MZSNSRNA5P Maize stripe virus nonstructural protein RNA5, complete cds
Length=1317

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  37    GAGAAGGATAAGATCAAAGA  56
             ||||||||||||||||||||
Sbjct  1065  GAGAAGGATAAGATCAAAGA  1084


>emb|CU468218.7| Wallaby DNA sequence from clone MEKBa-34H17, complete sequence
Length=181830

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  36      GGAGAAGGATAAGATCAAA  54
               |||||||||||||||||||
Sbjct  160196  GGAGAAGGATAAGATCAAA  160214


>gb|AC202838.3| MACACA MULATTA BAC clone CH250-381I8 from chromosome 15, complete 
sequence
Length=180957

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  8      GAAAGGACAAAGAATTGAA  26
              |||||||||||||||||||
Sbjct  60928  GAAAGGACAAAGAATTGAA  60910


>gb|AC215550.4| Macaca mulatta  BAC CH250-122N22 (Children's Hospital Oakland 
Research Institute Rhesus macaque Adult Male BAC Library) complete 
sequence
Length=196450

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  29     CAGGCAAGGAGAAGGATAA  47
              |||||||||||||||||||
Sbjct  20929  CAGGCAAGGAGAAGGATAA  20947


>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
Length=27905053

 Features in this part of subject sequence:
   CG5514-PB, isoform B
   CG5514-PA, isoform A

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30        AGGCAAGGAGAAGGATAAG  48
                 |||||||||||||||||||
Sbjct  23766654  AGGCAAGGAGAAGGATAAG  23766672


>gb|AC160761.6| Mus musculus BAC clone RP24-163J22 from chromosome 7, complete 
sequence
Length=199480

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30      AGGCAAGGAGAAGGATAAG  48
               |||||||||||||||||||
Sbjct  169996  AGGCAAGGAGAAGGATAAG  170014


>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence
Length=172362

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30     AGGCAAGGAGAAGGATAAG  48
              |||||||||||||||||||
Sbjct  52703  AGGCAAGGAGAAGGATAAG  52721


>gb|AC167198.8| Mus musculus chromosome 3, clone RP23-409M14, complete sequence
Length=162427

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  77      AACAAAAGCAAGCAAGGAA  95
               |||||||||||||||||||
Sbjct  112774  AACAAAAGCAAGCAAGGAA  112792


>ref|NM_170361.1| Drosophila melanogaster CG5514 CG5514-RA, transcript variant 
A (CG5514), mRNA
Length=3957

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30    AGGCAAGGAGAAGGATAAG  48
             |||||||||||||||||||
Sbjct  2509  AGGCAAGGAGAAGGATAAG  2527


>ref|NM_143342.1| Drosophila melanogaster CG5514 CG5514-RB, transcript variant 
B (CG5514), mRNA
Length=3908

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30    AGGCAAGGAGAAGGATAAG  48
             |||||||||||||||||||
Sbjct  2509  AGGCAAGGAGAAGGATAAG  2527


>gb|AC127390.4| Homo sapiens BAC clone RP11-361H16 from 4, complete sequence
Length=48860

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  32    GCAAGGAGAAGGATAAGAT  50
             |||||||||||||||||||
Sbjct  9868  GCAAGGAGAAGGATAAGAT  9850


>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains 
a novel gene and a protein tyrosine phosphatase non-receptor 
type 11 (Nooan syndrome) (PTPN11) pseudogene, complete 
sequence
Length=115224

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  38     AGAAGGATAAGATCAAAGA  56
              |||||||||||||||||||
Sbjct  57040  AGAAGGATAAGATCAAAGA  57022


>gb|AY119485.1| Drosophila melanogaster GH07623 full insert cDNA
Length=2815

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30    AGGCAAGGAGAAGGATAAG  48
             |||||||||||||||||||
Sbjct  1354  AGGCAAGGAGAAGGATAAG  1372


>emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chromosome 6, complete 
sequence
Length=157588

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  47     AGATCAAAGAAGCCCAGGA  65
              |||||||||||||||||||
Sbjct  45196  AGATCAAAGAAGCCCAGGA  45178


>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete 
sequence
Length=206648

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  30      AGGCAAGGAGAAGGATAAG  48
               |||||||||||||||||||
Sbjct  198866  AGGCAAGGAGAAGGATAAG  198848


>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
Length=1302002

 Features in this part of subject sequence:
   unnamed protein product

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  46      AAGATCAAAGAAGCCCAGG  64
               |||||||||||||||||||
Sbjct  140390  AAGATCAAAGAAGCCCAGG  140408


>ref|XM_448293.1| Candida glabrata CBS138, CAGL0K01573g partial mRNA
Length=1551

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  46    AAGATCAAAGAAGCCCAGG  64
             |||||||||||||||||||
Sbjct  1411  AAGATCAAAGAAGCCCAGG  1429


>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 
22 Contains the gene for a novel protein similar to vertebrate 
chromatin assembly factor 1 subunit A, p150 (CHAF1A), 
the gene for a novel protein (zgc:66492), the gene for a novel 
protein (zgc:66215), the gene for a novel protein similar 
to vertebrate adaptor-related protein complex 3, delta 1 subunit 
(AP3D1), the gene for a novel protein (zgc:55452), the 
gene for a novel protein similar to vertebrate sema, immunoglobulin 
(Ig), transmembrane (TM) and short cytoplasmic domain, 
semaphorin 4D (SEMA4D), the gene for a novel protein similar 
to vertebrate secretory carrier membrane protein 4 (SCAMP4) 
and a CpG island, complete sequence
Length=184499

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  77      AACAAAAGCAAGCAAGGAACAAA  99
               |||||||||||||||| ||||||
Sbjct  160436  AACAAAAGCAAGCAAGCAACAAA  160414


>gb|AC115071.9| Mus musculus chromosome 3, clone RP24-408F11, complete sequence
Length=139925

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  77      AACAAAAGCAAGCAAGGAA  95
               |||||||||||||||||||
Sbjct  119040  AACAAAAGCAAGCAAGGAA  119022


>emb|AL732494.16| Mouse DNA sequence from clone RP23-322L22 on chromosome 4 Contains 
a ribosomal protein L35a (Rpl35a) pseudogene, the Klf4 
gene for Kruppel-like factor 4 (gut), a novel gene, the 5' 
end of a novel gene and a CpG island, complete sequence
Length=109450

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  7      GGAAAGGACAAAGAATTGA  25
              |||||||||||||||||||
Sbjct  38492  GGAAAGGACAAAGAATTGA  38474


>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete 
sequence
Length=217178

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  30      AGGCAAGGAGAAGGATAAG  48
               |||||||||||||||||||
Sbjct  105099  AGGCAAGGAGAAGGATAAG  105117



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2577671
Number of extensions: 164357
Number of successful extensions: 43802
Number of sequences better than 10: 2
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 43802
Number of HSP's successfully gapped: 2
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1SJ4E1016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|34-132
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   141    5e-31
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   141    5e-31
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   133    1e-28
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   133    1e-28
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   109    2e-21
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   101    5e-19
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...  91.7    5e-16
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...  85.7    3e-14
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...  85.7    3e-14
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...  85.7    3e-14
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...  83.8    1e-13
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...  83.8    1e-13
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  77.8    7e-12
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...  77.8    7e-12
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...  65.9    3e-08
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  61.9    4e-07
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  54.0    1e-04
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  54.0    1e-04
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  48.1    0.006
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  48.1    0.006
gb|AC187336.11|  Canis Familiaris chromosome 12, clone XX-312G...  42.1    0.38 
emb|BX005201.7|  Zebrafish DNA sequence from clone CH211-129C2...  42.1    0.38 
ref|XM_001709526.1|  Giardia lamblia ATCC 50803 DNA-directed R...  40.1    1.5  
gb|EF547367.1|  South African passiflora virus polyprotein gen...  40.1    1.5  
emb|AM464409.1|  Vitis vinifera contig VV78X209150.6, whole ge...  40.1    1.5  
gb|DQ482043.1|  Bactrocera dorsalis microsatellite Bd85B sequence  40.1    1.5  
gb|AC188192.3|  Taeniopygia guttata BAC clone TGMCBa-5H12 from...  40.1    1.5  
gb|AC151473.3|  Mus musculus BAC clone RP24-492O15 from chromo...  40.1    1.5  
gb|AC092478.2|  Sus scrofa clone RP44-360A14, complete sequence    40.1    1.5  
gb|AC122268.5|  Mus musculus BAC clone RP23-216B15 from 14, co...  40.1    1.5  
emb|AL606515.4|  Human DNA sequence from clone RP11-575K24 on ...  40.1    1.5  
gb|S58504.1|  NS5=44.2 kda protein {RNA5} [maize stripe virus ...  40.1    1.5  
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  40.1    1.5  
emb|X60325.1|GLRPOA3  G.lamblia rpoA3 gene for subunit A of DN...  40.1    1.5  
gb|AC016727.10|  Homo sapiens BAC clone RP11-355B11 from 2, co...  40.1    1.5  
gb|AC092093.34|  Mus musculus strain C57BL/6J chromosome 10 cl...  40.1    1.5  
gb|AC154416.2|  Mus musculus BAC clone RP24-232F23 from 17, co...  40.1    1.5  
gb|AC091764.35|  Mus musculus strain C57BL/6J chromosome 10 cl...  40.1    1.5  
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  40.1    1.5  
gb|L13446.1|MZSNSRNA5P  Maize stripe virus nonstructural prote...  40.1    1.5  
emb|CU468218.7|  Wallaby DNA sequence from clone MEKBa-34H17, ...  38.2    5.9  
gb|AC187974.21|  Canis familiaris chromosome 20, clone XX-113L...  38.2    5.9  
gb|EF015903.1|  Homo sapiens neuronal PAS domain protein 2 (NP...  38.2    5.9  
gb|AC189292.1|  Brassica rapa subsp. pekinensis clone KBrB026E...  38.2    5.9  
gb|AC167198.8|  Mus musculus chromosome 3, clone RP23-409M14, ...  38.2    5.9  
gb|AC164553.2|  Mus musculus BAC clone RP23-361L12 from chromo...  38.2    5.9  
gb|AC102689.10|  Mus musculus chromosome 12, clone RP24-142L2,...  38.2    5.9  
gb|AC113589.13|  Mus musculus chromosome 9, clone RP23-257A19,...  38.2    5.9  
emb|AL356234.18|  Human DNA sequence from clone RP11-95M15 on ...  38.2    5.9  
gb|AC104066.3|  Homo sapiens BAC clone RP11-177B4 from 4, comp...  38.2    5.9  
dbj|AP008214.1|  Oryza sativa (japonica cultivar-group) genomi...  38.2    5.9  
emb|AL355315.18|  Human DNA sequence from clone RP11-548K23 on...  38.2    5.9  
emb|AL356094.11|  Human DNA sequence from clone RP11-64I5 on c...  38.2    5.9  
emb|CR380957.1|  Candida glabrata strain CBS138 chromosome K c...  38.2    5.9  
ref|NM_001006339.1|  Gallus gallus coatomer protein complex, s...  38.2    5.9  
gb|AC016738.6|  Homo sapiens BAC clone RP11-426K3 from 2, comp...  38.2    5.9  
dbj|AP003917.3|  Oryza sativa Japonica Group genomic DNA, chro...  38.2    5.9  
ref|XM_448293.1|  Candida glabrata CBS138, CAGL0K01573g partia...  38.2    5.9  
gb|AC140200.4|  Mus musculus BAC clone RP23-263K2 from 14, com...  38.2    5.9  
gb|AC115071.9|  Mus musculus chromosome 3, clone RP24-408F11, ...  38.2    5.9  
gb|AC101855.14|  Mus musculus chromosome 1, clone RP23-301D16,...  38.2    5.9  
emb|AL355838.3|CNS05TCT  Human chromosome 14 DNA sequence BAC ...  38.2    5.9  
emb|AL807379.17|  Mouse DNA sequence from clone RP23-378L22 on...  38.2    5.9  
emb|AL671492.12|  Mouse DNA sequence from clone RP23-286H11 on...  38.2    5.9  
gb|AC162803.2|  Mus musculus BAC clone RP23-376G22 from chromo...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  34   AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  93

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  94   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  132


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| |||||||||| |||||||||||||||| || |
Sbjct  34   AAGGAAAAAGATAAGATCAAAGACGCCAAGGAGCAGTCAATGCAACAAAAGCAAGAAAAG  93

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  94   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  132


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||| |||||||||||||||||||||
Sbjct  37   AAGGAAAAAGATAAGATCAAAGAGGCCAAAGAGCAGTCAATGCAACAAAAGCAAGCAAGG  96

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||| ||||||||||||||||||||||||||||||
Sbjct  97   AACAAAGGGGCGAAGGAAACAGAGAGAGACGTTTCAACT  135


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||| ||||||||| |||||||||||
Sbjct  62   AAGGAAAAAGATAAGATCAAAGAGGCCAAAGAGCAGTCAATGCAACAACAGCAAGCAAGG  121

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||| ||||||||||||||||||||||||||||||
Sbjct  122  AACAAAGGGGCGAAGGAAACAGAGAGAGACGTTTCAACT  160


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||| ||||||||| |||||||||||
Sbjct  62   AAGGAAAAAGATAAGATCAAAGAGGCCAAAGAGCAGTCAATGCAACAACAGCAAGCAAGG  121

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||| ||||||||||||||||||||||||||||||
Sbjct  122  AACAAAGGGGCGAAGGAAACAGAGAGAGACGTTTCAACT  160


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 88/99 (88%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||| ||||||||||||||||||| |
Sbjct  34   AAGGAAAAAGATAAGATCAAAGACGCCAAAGAGCAGTCAATGCAACAAAAGCAAGCAACG  93

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            | || ||| ||||| ||||||||||||||||||||||||
Sbjct  94   AGCACAGGGGCGAAAGAAACAGAGAGAGACGTTTCAACT  132


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 78/87 (89%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  13   AAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCG  72
            |||||||| |||||| | || ||||| |||||||||| |||||||| || ||||||||| 
Sbjct  46   AAGATCAAGGAAGCCAAAGAACAGTCAATGCAACAAACGCAAGCAAAGAGCAAAGGAGCA  105

Query  73   AAGGAAACAGAGAGAGACGTTTCAACT  99
            |||||||||||||||||||||||||||
Sbjct  106  AAGGAAACAGAGAGAGACGTTTCAACT  132


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score = 91.7 bits (46),  Expect = 5e-16
 Identities = 73/82 (89%), Gaps = 0/82 (0%)
 Strand=Plus/Plus

Query  18   CAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGA  77
            |||||||||  | ||||||||  |||||||||||||||||| ||| |||||||| |||||
Sbjct  51   CAAAGAAGCTAAAGAGCAGTCAGTGCAACAAAAGCAAGCAAAGAATAAAGGAGCTAAGGA  110

Query  78   AACAGAGAGAGACGTTTCAACT  99
            ||||||||| ||||||||||||
Sbjct  111  AACAGAGAGGGACGTTTCAACT  132


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 85/99 (85%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| ||||| |||  |||||||||  | ||||||||  |||||||||||||||||| |
Sbjct  34   AAGGATAAGGAAAAGGACAAAGAAGCTAAAGAGCAGTCAGTGCAACAAAAGCAAGCAAAG  93

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            || |||||| | |||||||||||||| ||||||||||||
Sbjct  94   AATAAAGGAACTAAGGAAACAGAGAGGGACGTTTCAACT  132


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 85/99 (85%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||| ||||||||||  | |||||||| | ||||||||||||||| | |
Sbjct  34   AAGGATAAAGATAAGGTCAAAGAAGCTAAAGAGCAGTCAAGGCAACAAAAGCAAGCGAAG  93

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            || |||||||| |||||||||||||| |||||| |||||
Sbjct  94   AATAAAGGAGCCAAGGAAACAGAGAGGGACGTTGCAACT  132


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 85/99 (85%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | ||||||||  |||||||||||||||||| |
Sbjct  37   AAGGAAAAAGATAAGATCAAAGACGCCAAAGAGCAGTCTGTGCAACAAAAGCAAGCAACG  96

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            | || ||||   || ||||||||||||||||||||||||
Sbjct  97   AGCACAGGATTCAAAGAAACAGAGAGAGACGTTTCAACT  135


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 72/82 (87%), Gaps = 0/82 (0%)
 Strand=Plus/Plus

Query  18   CAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGA  77
            |||||||||  | ||||||||  |||||||||||||||||| ||| |||||| | |||||
Sbjct  51   CAAAGAAGCTAAAGAGCAGTCAGTGCAACAAAAGCAAGCAAAGAATAAAGGAACTAAGGA  110

Query  78   AACAGAGAGAGACGTTTCAACT  99
            ||||||||| ||||||||||||
Sbjct  111  AACAGAGAGGGACGTTTCAACT  132


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 72/82 (87%), Gaps = 0/82 (0%)
 Strand=Plus/Plus

Query  18   CAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGA  77
            |||||||||  | ||||||||  |||||||||||||||||| ||| |||||| | |||||
Sbjct  51   CAAAGAAGCTAAAGAGCAGTCAGTGCAACAAAAGCAAGCAAAGAATAAAGGAACTAAGGA  110

Query  78   AACAGAGAGAGACGTTTCAACT  99
            ||||||||| ||||||||||||
Sbjct  111  AACAGAGAGGGACGTTTCAACT  132


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 72/83 (86%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||| |||||||| |||||||||| |
Sbjct  34   AAGGAAAAAGATAAGATCAAAGACGCCAAAGAGCAGTCAATGCAACAGAAGCAAGCAAAG  93

Query  61   AACAAAGGAGCGAAGGAAACAGA  83
            |||||||| ||  ||||||||||
Sbjct  94   AACAAAGGGGCCGAGGAAACAGA  116


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 84/99 (84%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGGAGAAGGATAAGATCAAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGG  60
            ||||| || |||||||||||||| ||| | |||||||   |||||||||||||||||| |
Sbjct  37   AAGGAAAAAGATAAGATCAAAGACGCCAAAGAGCAGTTAGTGCAACAAAAGCAAGCAACG  96

Query  61   AACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACT  99
            | || ||||   || ||||||||||||||||||||||||
Sbjct  97   AGCACAGGATTCAAAGAAACAGAGAGAGACGTTTCAACT  135


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 60/69 (86%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  31   GAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGAC  90
            ||||||||  |||||||||||||||| | ||| |||||| | |||||||||||||| |||
Sbjct  64   GAGCAGTCAGTGCAACAAAAGCAAGCGAAGAATAAAGGAACCAAGGAAACAGAGAGGGAC  123

Query  91   GTTTCAACT  99
            ||| |||||
Sbjct  124  GTTGCAACT  132


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 40/43 (93%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  41   TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGA  83
            ||||||| |||||||||| ||||||||| ||||||||||||||
Sbjct  74   TGCAACAGAAGCAAGCAAAGAACAAAGGGGCGAAGGAAACAGA  116


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 60/71 (84%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  19   AAAGAAGCCCAGGAGCAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAA  78
            ||||||||| | ||||| || | |||||| |||||||||| ||| ||||| || ||||||
Sbjct  292  AAAGAAGCCAAAGAGCAATCAACGCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAA  351

Query  79   ACAGAGAGAGA  89
            ||||| |||||
Sbjct  352  ACAGAAAGAGA  362


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 45/51 (88%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  43   CAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  93
            ||||| ||||||||||||||||||||||  | |||||| ||||| ||||||
Sbjct  319  CAACAGAAGCAAGCAAGGAACAAAGGAGTCACGGAAACGGAGAGGGACGTT  369


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 42/48 (87%), Gaps = 0/48 (0%)
 Strand=Plus/Plus

Query  42    GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGA  89
             |||||| |||||||||| ||| ||||| || ||||||||||| |||||
Sbjct  8484  GCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAAACAGAAAGAGA  8531


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 42/48 (87%), Gaps = 0/48 (0%)
 Strand=Plus/Plus

Query  42   GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGA  89
            |||||| |||||||||| ||| ||||| || ||||||||||| |||||
Sbjct  240  GCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAAACAGAAAGAGA  287


>gb|AC187336.11| Canis Familiaris chromosome 12, clone XX-312G10, complete sequence
Length=195602

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 27/29 (93%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  61      AACAAAGGAGCGAAGGAAACAGAGAGAGA  89
               ||||||||||| ||||||| |||||||||
Sbjct  136675  AACAAAGGAGCAAAGGAAAAAGAGAGAGA  136647


>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 
22 Contains the gene for a novel protein similar to vertebrate 
chromatin assembly factor 1 subunit A, p150 (CHAF1A), 
the gene for a novel protein (zgc:66492), the gene for a novel 
protein (zgc:66215), the gene for a novel protein similar 
to vertebrate adaptor-related protein complex 3, delta 1 subunit 
(AP3D1), the gene for a novel protein (zgc:55452), the 
gene for a novel protein similar to vertebrate sema, immunoglobulin 
(Ig), transmembrane (TM) and short cytoplasmic domain, 
semaphorin 4D (SEMA4D), the gene for a novel protein similar 
to vertebrate secretory carrier membrane protein 4 (SCAMP4) 
and a CpG island, complete sequence
Length=184499

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 24/25 (96%), Gaps = 0/25 (0%)
 Strand=Plus/Minus

Query  44      AACAAAAGCAAGCAAGGAACAAAGG  68
               |||||||||||||||| ||||||||
Sbjct  160436  AACAAAAGCAAGCAAGCAACAAAGG  160412


>ref|XM_001709526.1| Giardia lamblia ATCC 50803 DNA-directed RNA polymerase subunit 
A' (GL50803_16223) partial mRNA
Length=5226

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  17   TCAAAGAAGCCCAGGAGCAG  36
            ||||||||||||||||||||
Sbjct  440  TCAAAGAAGCCCAGGAGCAG  459


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 38/44 (86%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  49   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGT  92
            |||||| ||| | |||||||| | |||||||||||||| |||||
Sbjct  694  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGT  737


>emb|AM464409.1| Vitis vinifera contig VV78X209150.6, whole genome shotgun sequence
Length=42723

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  50     AGCAAGCAAGGAACAAAGGA  69
              ||||||||||||||||||||
Sbjct  16758  AGCAAGCAAGGAACAAAGGA  16777


>gb|DQ482043.1| Bactrocera dorsalis microsatellite Bd85B sequence
Length=232

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  43   CAACAAAAGCAAGCAAGGAA  62
            ||||||||||||||||||||
Sbjct  163  CAACAAAAGCAAGCAAGGAA  144


>gb|AC188192.3| Taeniopygia guttata BAC clone TGMCBa-5H12 from chromosome unknown, 
complete sequence
Length=131069

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  50     AGCAAGCAAGGAACAAAGGAGCGAAGGAAACA  81
              |||||| ||||||||||| ||| |||||||||
Sbjct  81826  AGCAAGAAAGGAACAAAGAAGCAAAGGAAACA  81857


>gb|AC151473.3| Mus musculus BAC clone RP24-492O15 from chromosome 17, complete 
sequence
Length=128797

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  47    AAAAGCAAGCAAGGAACAAAGGAGCGAAGGAA  78
             ||||||||||||||||  |||||| |||||||
Sbjct  5728  AAAAGCAAGCAAGGAAGGAAGGAGGGAAGGAA  5697


>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence
Length=161008

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  1      AAGGAGAAGGATAAGATCAA  20
              ||||||||||||||||||||
Sbjct  35872  AAGGAGAAGGATAAGATCAA  35891


>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence
Length=207136

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  67      GGAGCGAAGGAAACAGAGAGAGAC  90
               |||| |||||||||||||||||||
Sbjct  101463  GGAGGGAAGGAAACAGAGAGAGAC  101486


>emb|AL606515.4| Human DNA sequence from clone RP11-575K24 on chromosome X, complete 
sequence
Length=39017

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  10    GATAAGATCAAAGAAGCCCA  29
             ||||||||||||||||||||
Sbjct  6705  GATAAGATCAAAGAAGCCCA  6724


>gb|S58504.1| NS5=44.2 kda protein {RNA5} [maize stripe virus MStV, Genomic 
RNA, 1317 nt]
Length=1317

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  4     GAGAAGGATAAGATCAAAGA  23
             ||||||||||||||||||||
Sbjct  1065  GAGAAGGATAAGATCAAAGA  1084


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 38/44 (86%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  49   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGT  92
            |||||| ||| | |||||||| | |||||||||||||| |||||
Sbjct  433  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGT  476


>emb|X60325.1|GLRPOA3 G.lamblia rpoA3 gene for subunit A of DNA dependent RNA polymerase 
III
Length=8333

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  17    TCAAAGAAGCCCAGGAGCAG  36
             ||||||||||||||||||||
Sbjct  3451  TCAAAGAAGCCCAGGAGCAG  3470


>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence
Length=159692

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  50    AGCAAGCAAGGAACAAAGGA  69
             ||||||||||||||||||||
Sbjct  2625  AGCAAGCAAGGAACAAAGGA  2644


>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, 
complete sequence
Length=200124

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  51      GCAAGCAAGGAACAAAGGAG  70
               ||||||||||||||||||||
Sbjct  181572  GCAAGCAAGGAACAAAGGAG  181553


>gb|AC154416.2| Mus musculus BAC clone RP24-232F23 from 17, complete sequence
Length=167542

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  47      AAAAGCAAGCAAGGAACAAAGGAGCGAAGGAA  78
               ||||||||||||||||  |||||| |||||||
Sbjct  163965  AAAAGCAAGCAAGGAAGGAAGGAGGGAAGGAA  163934


>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, 
complete sequence
Length=230848

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  51     GCAAGCAAGGAACAAAGGAG  70
              ||||||||||||||||||||
Sbjct  90222  GCAAGCAAGGAACAAAGGAG  90203


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 38/44 (86%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  49   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGT  92
            |||||| ||| | |||||||| | |||||||||||||| |||||
Sbjct  433  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGT  476


>gb|L13446.1|MZSNSRNA5P Maize stripe virus nonstructural protein RNA5, complete cds
Length=1317

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  4     GAGAAGGATAAGATCAAAGA  23
             ||||||||||||||||||||
Sbjct  1065  GAGAAGGATAAGATCAAAGA  1084


>emb|CU468218.7| Wallaby DNA sequence from clone MEKBa-34H17, complete sequence
Length=181830

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  3       GGAGAAGGATAAGATCAAA  21
               |||||||||||||||||||
Sbjct  160196  GGAGAAGGATAAGATCAAA  160214


>gb|AC187974.21| Canis familiaris chromosome 20, clone XX-113L1, complete sequence
Length=207974

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  50      AGCAAGCAAGGAACAAAGG  68
               |||||||||||||||||||
Sbjct  112795  AGCAAGCAAGGAACAAAGG  112777


>gb|EF015903.1| Homo sapiens neuronal PAS domain protein 2 (NPAS2) gene, complete 
cds
Length=182675

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  72      GAAGGAAACAGAGAGAGAC  90
               |||||||||||||||||||
Sbjct  125979  GAAGGAAACAGAGAGAGAC  125961


>gb|AC189292.1| Brassica rapa subsp. pekinensis clone KBrB026E08, complete sequence
Length=112398

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  75     GGAAACAGAGAGAGACGTTTCAA  97
              ||||||| |||||||||||||||
Sbjct  26498  GGAAACAAAGAGAGACGTTTCAA  26476


>gb|AC167198.8| Mus musculus chromosome 3, clone RP23-409M14, complete sequence
Length=162427

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  44      AACAAAAGCAAGCAAGGAA  62
               |||||||||||||||||||
Sbjct  112774  AACAAAAGCAAGCAAGGAA  112792


>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete 
sequence
Length=217754

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  72      GAAGGAAACAGAGAGAGAC  90
               |||||||||||||||||||
Sbjct  203412  GAAGGAAACAGAGAGAGAC  203430


>gb|AC102689.10| Mus musculus chromosome 12, clone RP24-142L2, complete sequence
Length=203221

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  57     AAGGAACAAAGGAGCGAAGGAAA  79
              ||||||||||||| |||||||||
Sbjct  65816  AAGGAACAAAGGAACGAAGGAAA  65838


>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence
Length=213826

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  57     AAGGAACAAAGGAGCGAAGGAAA  79
              ||||||||| |||||||||||||
Sbjct  22859  AAGGAACAAGGGAGCGAAGGAAA  22837


>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains 
a novel gene and a protein tyrosine phosphatase non-receptor 
type 11 (Nooan syndrome) (PTPN11) pseudogene, complete 
sequence
Length=115224

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  5      AGAAGGATAAGATCAAAGA  23
              |||||||||||||||||||
Sbjct  57040  AGAAGGATAAGATCAAAGA  57022



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 3050960
Number of extensions: 192174
Number of successful extensions: 50943
Number of sequences better than 10: 6
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 50943
Number of HSP's successfully gapped: 6
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
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	Status=READY
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--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1U14VA014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|67-165
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   172    2e-40
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   172    2e-40
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   165    4e-38
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   165    4e-38
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   149    2e-33
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   141    5e-31
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   137    9e-30
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   125    3e-26
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   121    5e-25
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   121    5e-25
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   121    5e-25
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   119    2e-24
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   119    2e-24
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   113    1e-22
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  91.7    5e-16
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  83.8    1e-13
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  81.8    4e-13
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  75.8    3e-11
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  75.8    3e-11
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  75.8    3e-11
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  75.8    3e-11
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  75.8    3e-11
gb|EF547367.1|  South African passiflora virus polyprotein gen...  73.8    1e-10
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  73.8    1e-10
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  73.8    1e-10
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  71.9    4e-10
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  50.1    0.002
gb|AC187336.11|  Canis Familiaris chromosome 12, clone XX-312G...  42.1    0.38 
emb|BX005201.7|  Zebrafish DNA sequence from clone CH211-129C2...  42.1    0.38 
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  42.1    0.38 
emb|AM464409.1|  Vitis vinifera contig VV78X209150.6, whole ge...  40.1    1.5  
gb|DQ482043.1|  Bactrocera dorsalis microsatellite Bd85B sequence  40.1    1.5  
gb|AC188192.3|  Taeniopygia guttata BAC clone TGMCBa-5H12 from...  40.1    1.5  
gb|AC151473.3|  Mus musculus BAC clone RP24-492O15 from chromo...  40.1    1.5  
gb|AC122268.5|  Mus musculus BAC clone RP23-216B15 from 14, co...  40.1    1.5  
gb|AC016727.10|  Homo sapiens BAC clone RP11-355B11 from 2, co...  40.1    1.5  
gb|AC092093.34|  Mus musculus strain C57BL/6J chromosome 10 cl...  40.1    1.5  
gb|AC154416.2|  Mus musculus BAC clone RP24-232F23 from 17, co...  40.1    1.5  
gb|AC091764.35|  Mus musculus strain C57BL/6J chromosome 10 cl...  40.1    1.5  
gb|AC187974.21|  Canis familiaris chromosome 20, clone XX-113L...  38.2    5.9  
ref|XM_001347622.1|  Plasmodium falciparum 3D7 gene 11-1 prote...  38.2    5.9  
gb|EF015903.1|  Homo sapiens neuronal PAS domain protein 2 (NP...  38.2    5.9  
gb|AC189292.1|  Brassica rapa subsp. pekinensis clone KBrB026E...  38.2    5.9  
gb|AC154913.4|  Ornithorhynchus anatinus BAC clone OABb-535A1 ...  38.2    5.9  
gb|AC167198.8|  Mus musculus chromosome 3, clone RP23-409M14, ...  38.2    5.9  
gb|AE014835.1|  Plasmodium falciparum 3D7 chromosome 10 sectio...  38.2    5.9  
gb|AC164553.2|  Mus musculus BAC clone RP23-361L12 from chromo...  38.2    5.9  
gb|AC102689.10|  Mus musculus chromosome 12, clone RP24-142L2,...  38.2    5.9  
gb|AC113589.13|  Mus musculus chromosome 9, clone RP23-257A19,...  38.2    5.9  
gb|AC104066.3|  Homo sapiens BAC clone RP11-177B4 from 4, comp...  38.2    5.9  
dbj|AP008214.1|  Oryza sativa (japonica cultivar-group) genomi...  38.2    5.9  
emb|AL355315.18|  Human DNA sequence from clone RP11-548K23 on...  38.2    5.9  
ref|NM_001006339.1|  Gallus gallus coatomer protein complex, s...  38.2    5.9  
gb|AC016738.6|  Homo sapiens BAC clone RP11-426K3 from 2, comp...  38.2    5.9  
dbj|AP003917.3|  Oryza sativa Japonica Group genomic DNA, chro...  38.2    5.9  
gb|AC127373.3|  Mus musculus BAC clone RP23-42M8 from 6, compl...  38.2    5.9  
gb|AC140200.4|  Mus musculus BAC clone RP23-263K2 from 14, com...  38.2    5.9  
gb|AC115071.9|  Mus musculus chromosome 3, clone RP24-408F11, ...  38.2    5.9  
gb|AC101855.14|  Mus musculus chromosome 1, clone RP23-301D16,...  38.2    5.9  
emb|AL355838.3|CNS05TCT  Human chromosome 14 DNA sequence BAC ...  38.2    5.9  
emb|AL807379.17|  Mouse DNA sequence from clone RP23-378L22 on...  38.2    5.9  
emb|AL671492.12|  Mouse DNA sequence from clone RP23-286H11 on...  38.2    5.9  
gb|AC162803.2|  Mus musculus BAC clone RP23-376G22 from chromo...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  67   CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  126

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  127  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  165


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct  67   CAGTCAATGCAACAAAAGCAAGAAAAGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  126

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  127  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  165


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 93/95 (97%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  70   CAGTCAATGCAACAAAAGCAAGCAAGGAACAAAGGGGCGAAGGAAACAGAGAGAGACGTT  129

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  95
            |||||||||||||||||||||||||||||||||||
Sbjct  130  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  164


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  95   CAGTCAATGCAACAACAGCAAGCAAGGAACAAAGGGGCGAAGGAAACAGAGAGAGACGTT  154

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  95
            |||||||||||||||||||||||||||||||||||
Sbjct  155  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  189


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  95   CAGTCAATGCAACAACAGCAAGCAAGGAACAAAGGGGCGAAGGAAACAGAGAGAGACGTT  154

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  95
            |||||||||||||||||||||||||||||||||||
Sbjct  155  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  189


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| |||||||||| |||||||| || ||||||||| |||||||||||||||||||||
Sbjct  67   CAGTCAATGCAACAAACGCAAGCAAAGAGCAAAGGAGCAAAGGAAACAGAGAGAGACGTT  126

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  99
            ||||||||||| |||||||||||||||||||||||||||
Sbjct  127  TCAACTAGTTCATCAGGACAACTAGTTCCACGTCTGCAA  165


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 89/95 (93%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| ||||||||||||||||||| || || ||| ||||| ||||||||||||||||||
Sbjct  67   CAGTCAATGCAACAAAAGCAAGCAACGAGCACAGGGGCGAAAGAAACAGAGAGAGACGTT  126

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  95
            |||||||||||||||||||||||||||||||||||
Sbjct  127  TCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  161


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  137 bits (69),  Expect = 9e-30
 Identities = 81/85 (95%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||
Sbjct  74   TGCAACAAAAGCAAGCAAAGAATAAAGGAGCTAAGGAAACAGAGAGGGACGTTTCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACG  92
            |||||||||||||||||||||||||
Sbjct  134  GTTCTTCAGGACAACTAGTTCCACG  158


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 84/91 (92%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  9    GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAG  68
            ||||||||||||||| | ||| |||||||| |||||||||||||| |||||| |||||||
Sbjct  75   GCAACAAAAGCAAGCGAAGAATAAAGGAGCCAAGGAAACAGAGAGGGACGTTGCAACTAG  134

Query  69   TTCTTCAGGACAACTAGTTCCACGTCTGCAA  99
            |||||||||||||||||||||||| ||||||
Sbjct  135  TTCTTCAGGACAACTAGTTCCACGCCTGCAA  165


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 79/85 (92%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| ||| |||||| | |||||||||||||| |||||||||||||
Sbjct  74   TGCAACAAAAGCAAGCAAAGAATAAAGGAACTAAGGAAACAGAGAGGGACGTTTCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACG  92
            |||||||||| ||||||||||||||
Sbjct  134  GTTCTTCAGGGCAACTAGTTCCACG  158


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 79/85 (92%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| ||| |||||| | |||||||||||||| |||||||||||||
Sbjct  74   TGCAACAAAAGCAAGCAAAGAATAAAGGAACTAAGGAAACAGAGAGGGACGTTTCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACG  92
            |||||||||| ||||||||||||||
Sbjct  134  GTTCTTCAGGGCAACTAGTTCCACG  158


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 79/85 (92%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| ||| |||||| | |||||||||||||| |||||||||||||
Sbjct  74   TGCAACAAAAGCAAGCAAAGAATAAAGGAACTAAGGAAACAGAGAGGGACGTTTCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACG  92
            |||||||||| ||||||||||||||
Sbjct  134  GTTCTTCAGGGCAACTAGTTCCACG  158


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 81/88 (92%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| || || ||||   || |||||||||||||||||||||||||
Sbjct  77   TGCAACAAAAGCAAGCAACGAGCACAGGATTCAAAGAAACAGAGAGAGACGTTTCAACTA  136

Query  68   GTTCTTCAGGACAACTAGTTCCACGTCT  95
            ||||||||||||||||||||||||||||
Sbjct  137  GTTCTTCAGGACAACTAGTTCCACGTCT  164


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 81/88 (92%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||||| || || ||||   || |||||||||||||||||||||||||
Sbjct  77   TGCAACAAAAGCAAGCAACGAGCACAGGATTCAAAGAAACAGAGAGAGACGTTTCAACTA  136

Query  68   GTTCTTCAGGACAACTAGTTCCACGTCT  95
            ||||||||||||||||||||||||||||
Sbjct  137  GTTCTTCAGGACAACTAGTTCCACGTCT  164


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 78/85 (91%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            |||||||||||||||| | ||| |||||| | |||||||||||||| |||||| ||||||
Sbjct  74   TGCAACAAAAGCAAGCGAAGAATAAAGGAACCAAGGAAACAGAGAGGGACGTTGCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACG  92
            |||||||||||||||||||||||||
Sbjct  134  GTTCTTCAGGACAACTAGTTCCACG  158


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 91.7 bits (46),  Expect = 5e-16
 Identities = 76/86 (88%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            ||||||| |||||||||| ||||||||| |||||||||||||| || || ||| ||||||
Sbjct  74   TGCAACAGAAGCAAGCAAAGAACAAAGGGGCGAAGGAAACAGAAAGGGATGTTGCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACGT  93
            |||||||||| ||| | |||||||||
Sbjct  134  GTTCTTCAGGGCAATTGGTTCCACGT  159


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 75/86 (87%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            ||||||| |||||||||| ||||||||| ||  |||||||||| || || ||| ||||||
Sbjct  534  TGCAACAGAAGCAAGCAAAGAACAAAGGGGCCGAGGAAACAGAAAGGGATGTTGCAACTA  593

Query  68   GTTCTTCAGGACAACTAGTTCCACGT  93
            |||||||||||||| | |||||||||
Sbjct  594  GTTCTTCAGGACAATTGGTTCCACGT  619


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 80/93 (86%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  1    CAGTCGATGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTT  60
            ||||| |||||||| |||||||||| ||||||||| ||  |||||||||| || || |||
Sbjct  67   CAGTCAATGCAACAGAAGCAAGCAAAGAACAAAGGGGCCGAGGAAACAGAAAGGGATGTT  126

Query  61   TCAACTAGTTCTTCAGGACAACTAGTTCCACGT  93
             |||||||||||||||| ||| | |||||||||
Sbjct  127  GCAACTAGTTCTTCAGGGCAATTGGTTCCACGT  159


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 74/86 (86%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            ||||||| |||||||||| ||||||||| ||  |||||||||| || || ||| ||||||
Sbjct  74   TGCAACAGAAGCAAGCAAAGAACAAAGGGGCCGAGGAAACAGAAAGGGATGTTGCAACTA  133

Query  68   GTTCTTCAGGACAACTAGTTCCACGT  93
            |||||||||| ||| | |||||||||
Sbjct  134  GTTCTTCAGGGCAATTGGTTCCACGT  159


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 77/90 (85%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  9     GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAG  68
             |||||| |||||||||| ||| ||||| || ||||||||||| ||||| ||  || ||||
Sbjct  8484  GCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAAACAGAAAGAGATGTAGCAGCTAG  8543

Query  69    TTCTTCAGGACAACTAGTTCCACGTCTGCA  98
             ||||||||| |||||||| ||||| |||||
Sbjct  8544  TTCTTCAGGGCAACTAGTCCCACGCCTGCA  8573


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 74/86 (86%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  8    TGCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTA  67
            ||||||| |||||||||| ||||||||| ||  |||||||||| || || ||| ||||||
Sbjct  86   TGCAACAGAAGCAAGCAAAGAACAAAGGGGCCGAGGAAACAGAAAGGGATGTTGCAACTA  145

Query  68   GTTCTTCAGGACAACTAGTTCCACGT  93
            |||||||||| ||| | |||||||||
Sbjct  146  GTTCTTCAGGGCAATTGGTTCCACGT  171


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 77/90 (85%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  9    GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAG  68
            |||||| |||||||||| ||| ||||| || ||||||||||| ||||| ||  || ||||
Sbjct  315  GCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAAACAGAAAGAGATGTAGCAGCTAG  374

Query  69   TTCTTCAGGACAACTAGTTCCACGTCTGCA  98
            ||||||||| |||||||| ||||| |||||
Sbjct  375  TTCTTCAGGGCAACTAGTCCCACGCCTGCA  404


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 77/90 (85%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  9    GCAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAG  68
            |||||| |||||||||| ||| ||||| || ||||||||||| ||||| ||  || ||||
Sbjct  240  GCAACAGAAGCAAGCAAAGAATAAAGGGGCCAAGGAAACAGAAAGAGATGTAGCAGCTAG  299

Query  69   TTCTTCAGGACAACTAGTTCCACGTCTGCA  98
            ||||||||| |||||||| ||||| |||||
Sbjct  300  TTCTTCAGGGCAACTAGTCCCACGCCTGCA  329


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 67/77 (87%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  16   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCA  75
            |||||| ||| | |||||||| | |||||||||||||| |||||  | ||||||||||||
Sbjct  694  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCA  753

Query  76   GGACAACTAGTTCCACG  92
            ||||||||||| |||||
Sbjct  754  GGACAACTAGTCCCACG  770


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 67/77 (87%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  16   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCA  75
            |||||| ||| | |||||||| | |||||||||||||| |||||  | ||||||||||||
Sbjct  433  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCA  492

Query  76   GGACAACTAGTTCCACG  92
            ||||||||||| |||||
Sbjct  493  GGACAACTAGTCCCACG  509


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 67/77 (87%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  16   AAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCA  75
            |||||| ||| | |||||||| | |||||||||||||| |||||  | ||||||||||||
Sbjct  433  AAGCAAACAAAGGACAAAGGAACCAAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCA  492

Query  76   GGACAACTAGTTCCACG  92
            ||||||||||| |||||
Sbjct  493  GGACAACTAGTCCCACG  509


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 72/84 (85%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  10   CAACAAAAGCAAGCAAGGAACAAAGGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGT  69
            ||||| ||||||||||||||||||||||  | |||||| ||||| |||||| ||| ||| 
Sbjct  319  CAACAGAAGCAAGCAAGGAACAAAGGAGTCACGGAAACGGAGAGGGACGTTGCAAATAGC  378

Query  70   TCTTCAGGACAACTAGTTCCACGT  93
            |||||||| ||| | |||||||||
Sbjct  379  TCTTCAGGGCAATTGGTTCCACGT  402


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 37/41 (90%), Gaps = 0/41 (0%)
 Strand=Plus/Plus

Query  43   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACT  83
            ||||||||||| |||||  |||||||||||||||| |||||
Sbjct  154  GAAACAGAGAGGGACGTCGCAACTAGTTCTTCAGGGCAACT  194


>gb|AC187336.11| Canis Familiaris chromosome 12, clone XX-312G10, complete sequence
Length=195602

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 27/29 (93%), Gaps = 0/29 (0%)
 Strand=Plus/Minus

Query  28      AACAAAGGAGCGAAGGAAACAGAGAGAGA  56
               ||||||||||| ||||||| |||||||||
Sbjct  136675  AACAAAGGAGCAAAGGAAAAAGAGAGAGA  136647


>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 
22 Contains the gene for a novel protein similar to vertebrate 
chromatin assembly factor 1 subunit A, p150 (CHAF1A), 
the gene for a novel protein (zgc:66492), the gene for a novel 
protein (zgc:66215), the gene for a novel protein similar 
to vertebrate adaptor-related protein complex 3, delta 1 subunit 
(AP3D1), the gene for a novel protein (zgc:55452), the 
gene for a novel protein similar to vertebrate sema, immunoglobulin 
(Ig), transmembrane (TM) and short cytoplasmic domain, 
semaphorin 4D (SEMA4D), the gene for a novel protein similar 
to vertebrate secretory carrier membrane protein 4 (SCAMP4) 
and a CpG island, complete sequence
Length=184499

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 24/25 (96%), Gaps = 0/25 (0%)
 Strand=Plus/Minus

Query  11      AACAAAAGCAAGCAAGGAACAAAGG  35
               |||||||||||||||| ||||||||
Sbjct  160436  AACAAAAGCAAGCAAGCAACAAAGG  160412


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 45/53 (84%), Gaps = 0/53 (0%)
 Strand=Plus/Plus

Query  43   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCT  95
            |||||||| ||||||||  || ||||||||||||| ||| | || ||||||||
Sbjct  208  GAAACAGAAAGAGACGTCGCAGCTAGTTCTTCAGGGCAATTGGTGCCACGTCT  260


>emb|AM464409.1| Vitis vinifera contig VV78X209150.6, whole genome shotgun sequence
Length=42723

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  17     AGCAAGCAAGGAACAAAGGA  36
              ||||||||||||||||||||
Sbjct  16758  AGCAAGCAAGGAACAAAGGA  16777


>gb|DQ482043.1| Bactrocera dorsalis microsatellite Bd85B sequence
Length=232

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  10   CAACAAAAGCAAGCAAGGAA  29
            ||||||||||||||||||||
Sbjct  163  CAACAAAAGCAAGCAAGGAA  144


>gb|AC188192.3| Taeniopygia guttata BAC clone TGMCBa-5H12 from chromosome unknown, 
complete sequence
Length=131069

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  17     AGCAAGCAAGGAACAAAGGAGCGAAGGAAACA  48
              |||||| ||||||||||| ||| |||||||||
Sbjct  81826  AGCAAGAAAGGAACAAAGAAGCAAAGGAAACA  81857


>gb|AC151473.3| Mus musculus BAC clone RP24-492O15 from chromosome 17, complete 
sequence
Length=128797

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  14    AAAAGCAAGCAAGGAACAAAGGAGCGAAGGAA  45
             ||||||||||||||||  |||||| |||||||
Sbjct  5728  AAAAGCAAGCAAGGAAGGAAGGAGGGAAGGAA  5697


>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence
Length=207136

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  34      GGAGCGAAGGAAACAGAGAGAGAC  57
               |||| |||||||||||||||||||
Sbjct  101463  GGAGGGAAGGAAACAGAGAGAGAC  101486


>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence
Length=159692

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  17    AGCAAGCAAGGAACAAAGGA  36
             ||||||||||||||||||||
Sbjct  2625  AGCAAGCAAGGAACAAAGGA  2644


>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, 
complete sequence
Length=200124

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  18      GCAAGCAAGGAACAAAGGAG  37
               ||||||||||||||||||||
Sbjct  181572  GCAAGCAAGGAACAAAGGAG  181553


>gb|AC154416.2| Mus musculus BAC clone RP24-232F23 from 17, complete sequence
Length=167542

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  14      AAAAGCAAGCAAGGAACAAAGGAGCGAAGGAA  45
               ||||||||||||||||  |||||| |||||||
Sbjct  163965  AAAAGCAAGCAAGGAAGGAAGGAGGGAAGGAA  163934


>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, 
complete sequence
Length=230848

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  18     GCAAGCAAGGAACAAAGGAG  37
              ||||||||||||||||||||
Sbjct  90222  GCAAGCAAGGAACAAAGGAG  90203


>gb|AC187974.21| Canis familiaris chromosome 20, clone XX-113L1, complete sequence
Length=207974

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  17      AGCAAGCAAGGAACAAAGG  35
               |||||||||||||||||||
Sbjct  112795  AGCAAGCAAGGAACAAAGG  112777


>ref|XM_001347622.1| Plasmodium falciparum 3D7 gene 11-1 protein precursor (PF10_0374) 
partial mRNA
Length=31770

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  59    TTTCAACTAGTTCTTCAGG  77
             |||||||||||||||||||
Sbjct  5050  TTTCAACTAGTTCTTCAGG  5032


>gb|EF015903.1| Homo sapiens neuronal PAS domain protein 2 (NPAS2) gene, complete 
cds
Length=182675

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  39      GAAGGAAACAGAGAGAGAC  57
               |||||||||||||||||||
Sbjct  125979  GAAGGAAACAGAGAGAGAC  125961


>gb|AC189292.1| Brassica rapa subsp. pekinensis clone KBrB026E08, complete sequence
Length=112398

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  42     GGAAACAGAGAGAGACGTTTCAA  64
              ||||||| |||||||||||||||
Sbjct  26498  GGAAACAAAGAGAGACGTTTCAA  26476


>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome 
unknown, complete sequence
Length=199332

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  69      TTCTTCAGGACAACTAGTTCCAC  91
               |||||||||| ||||||||||||
Sbjct  122941  TTCTTCAGGAAAACTAGTTCCAC  122919


>gb|AC167198.8| Mus musculus chromosome 3, clone RP23-409M14, complete sequence
Length=162427

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  11      AACAAAAGCAAGCAAGGAA  29
               |||||||||||||||||||
Sbjct  112774  AACAAAAGCAAGCAAGGAA  112792


>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the 
complete sequence
Length=180450

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  59     TTTCAACTAGTTCTTCAGG  77
              |||||||||||||||||||
Sbjct  13071  TTTCAACTAGTTCTTCAGG  13053


>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete 
sequence
Length=217754

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  39      GAAGGAAACAGAGAGAGAC  57
               |||||||||||||||||||
Sbjct  203412  GAAGGAAACAGAGAGAGAC  203430


>gb|AC102689.10| Mus musculus chromosome 12, clone RP24-142L2, complete sequence
Length=203221

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  24     AAGGAACAAAGGAGCGAAGGAAA  46
              ||||||||||||| |||||||||
Sbjct  65816  AAGGAACAAAGGAACGAAGGAAA  65838


>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence
Length=213826

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  24     AAGGAACAAAGGAGCGAAGGAAA  46
              ||||||||| |||||||||||||
Sbjct  22859  AAGGAACAAGGGAGCGAAGGAAA  22837



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2686752
Number of extensions: 149494
Number of successful extensions: 41605
Number of sequences better than 10: 4
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 41605
Number of HSP's successfully gapped: 4
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1VHE2T016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|100-198
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   182    2e-43
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   182    2e-43
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   182    2e-43
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   180    6e-43
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   174    4e-41
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   165    4e-38
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   159    2e-36
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   155    4e-35
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   155    4e-35
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   135    3e-29
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   123    1e-25
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   123    1e-25
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   123    1e-25
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   123    1e-25
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  93.7    1e-16
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  89.7    2e-15
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  89.7    2e-15
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  89.7    2e-15
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  87.7    7e-15
gb|EF547367.1|  South African passiflora virus polyprotein gen...  83.8    1e-13
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  83.8    1e-13
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  75.8    3e-11
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  75.8    3e-11
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  69.9    2e-09
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  69.9    2e-09
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  69.9    2e-09
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  65.9    3e-08
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  61.9    4e-07
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  56.0    3e-05
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  46.1    0.024
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  46.1    0.024
gb|BC111679.1|  Bos taurus similar to pregnancy-zone protein, ...  42.1    0.38 
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  42.1    0.38 
gb|AC122268.5|  Mus musculus BAC clone RP23-216B15 from 14, co...  40.1    1.5  
gb|DQ360822.1|  Soybean mosaic virus isolate XY polyprotein ge...  40.1    1.5  
gb|DQ360817.1|  Soybean mosaic virus isolate BZ polyprotein ge...  40.1    1.5  
gb|AC104137.5|  Homo sapiens BAC clone RP11-807H7 from 4, comp...  40.1    1.5  
emb|AJ628755.1|  Soybean mosaic virus partial polyprotein gene...  40.1    1.5  
gb|CP000749.1|  Marinomonas sp. MWYL1, complete genome             38.2    5.9  
emb|AM442969.2|  Vitis vinifera contig VV78X143548.5, whole ge...  38.2    5.9  
ref|XM_001009118.2|  Tetrahymena thermophila SB210 hypothetica...  38.2    5.9  
ref|XM_001462540.1|  Paramecium tetraurelia hypothetical prote...  38.2    5.9  
ref|XM_001347622.1|  Plasmodium falciparum 3D7 gene 11-1 prote...  38.2    5.9  
gb|EF015903.1|  Homo sapiens neuronal PAS domain protein 2 (NP...  38.2    5.9  
gb|AC189292.1|  Brassica rapa subsp. pekinensis clone KBrB026E...  38.2    5.9  
gb|AC154913.4|  Ornithorhynchus anatinus BAC clone OABb-535A1 ...  38.2    5.9  
gb|AE014835.1|  Plasmodium falciparum 3D7 chromosome 10 sectio...  38.2    5.9  
gb|AC164553.2|  Mus musculus BAC clone RP23-361L12 from chromo...  38.2    5.9  
emb|AL160032.14|  Human DNA sequence from clone RP11-474L7 on ...  38.2    5.9  
emb|AJ578645.1|EGU578645  Elaeis guineensis microsatellite DNA...  38.2    5.9  
gb|AC002524.1|  Homo sapiens x BAC GS1-257G1 (Genome Systems H...  38.2    5.9  
emb|AL513131.1|  Human DNA sequence from clone RP11-210H10 on ...  38.2    5.9  
ref|NM_001006339.1|  Gallus gallus coatomer protein complex, s...  38.2    5.9  
gb|AC016738.6|  Homo sapiens BAC clone RP11-426K3 from 2, comp...  38.2    5.9  
gb|AC138656.1|  Homo sapiens BAC clone RP11-421F20 from 4, com...  38.2    5.9  
gb|AC127373.3|  Mus musculus BAC clone RP23-42M8 from 6, compl...  38.2    5.9  
gb|AC140200.4|  Mus musculus BAC clone RP23-263K2 from 14, com...  38.2    5.9  
emb|AL355838.3|CNS05TCT  Human chromosome 14 DNA sequence BAC ...  38.2    5.9  
emb|AL807379.17|  Mouse DNA sequence from clone RP23-378L22 on...  38.2    5.9  
gb|AC135118.3|  Mus musculus BAC clone RP24-450N10 from 3, com...  38.2    5.9  
emb|AL590997.13|  Mouse DNA sequence from clone RP23-132J20 on...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  100  GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  159

Query  61   CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  160  CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  198


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  182 bits (92),  Expect = 2e-43
 Identities = 95/96 (98%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTG  63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  131  GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTA  190

Query  64   CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            ||||||||||||||||||||||||||||||||||||
Sbjct  191  CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  226


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  182 bits (92),  Expect = 2e-43
 Identities = 95/96 (98%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTG  63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  106  GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTA  165

Query  64   CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            ||||||||||||||||||||||||||||||||||||
Sbjct  166  CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  201


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  182 bits (92),  Expect = 2e-43
 Identities = 95/96 (98%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTG  63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  131  GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTA  190

Query  64   CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            ||||||||||||||||||||||||||||||||||||
Sbjct  191  CAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  226


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  60
            ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  100  GGAGCAAAGGAAACAGAGAGAGACGTTTCAACTAGTTCATCAGGACAACTAGTTCCACGT  159

Query  61   CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  160  CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  198


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  174 bits (88),  Expect = 4e-41
 Identities = 94/96 (97%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  100  GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  159

Query  61   CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATG  96
            |||||||||||||||||||||||||| | |||||||
Sbjct  160  CTGCAAAAGATTAGCAAAAAGATGAACACGCCCATG  195


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  60
            ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||| 
Sbjct  100  GGAGCCAAGGAAACAGAGAGGGACGTTGCAACTAGTTCTTCAGGACAACTAGTTCCACGC  159

Query  61   CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  160  CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATGATC  198


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  159 bits (80),  Expect = 2e-36
 Identities = 89/92 (96%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  4    GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTG  63
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  103  GCGAAAGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTA  162

Query  64   CAAAAGATTAGCAAAAAGATGAATATGCCCAT  95
            ||||||||||||||||||||||| ||||||||
Sbjct  163  CAAAAGATTAGCAAAAAGATGAACATGCCCAT  194


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 84/86 (97%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  10   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAG  69
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  112  GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAG  171

Query  70   ATTAGCAAAAAGATGAATATGCCCAT  95
            ||||||||||||||||| ||||||||
Sbjct  172  ATTAGCAAAAAGATGAACATGCCCAT  197


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 84/86 (97%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  10   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAG  69
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  112  GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAG  171

Query  70   ATTAGCAAAAAGATGAATATGCCCAT  95
            ||||||||||||||||| ||||||||
Sbjct  172  ATTAGCAAAAAGATGAACATGCCCAT  197


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  135 bits (68),  Expect = 3e-29
 Identities = 89/96 (92%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    GGAGCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGT  60
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct  100  GGAGCTAAGGAAACAGAGAGGGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGC  159

Query  61   CTGCAAAAGATTAGCAAAAAGATGAATATGCCCATG  96
             | |||||||||||||||||||||||  ||||||||
Sbjct  160  TTACAAAAGATTAGCAAAAAGATGAACTTGCCCATG  195


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 83/90 (92%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| ||||||||||||||||||||||| ||||||||||||||  | |||
Sbjct  106  AAGGAAACAGAGAGGGACGTTTCAACTAGTTCTTCAGGGCAACTAGTTCCACGCTTACAA  165

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            ||||||||||||||||||||  ||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATG  195


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 83/90 (92%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| ||||||||||||||||||||||| ||||||||||||||  | |||
Sbjct  106  AAGGAAACAGAGAGGGACGTTTCAACTAGTTCTTCAGGGCAACTAGTTCCACGCTTACAA  165

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            ||||||||||||||||||||  ||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATG  195


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 83/90 (92%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| ||||||||||||||||||||||| ||||||||||||||  | |||
Sbjct  106  AAGGAAACAGAGAGGGACGTTTCAACTAGTTCTTCAGGGCAACTAGTTCCACGCTTACAA  165

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            ||||||||||||||||||||  ||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATG  195


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 83/90 (92%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| |||||| |||||||||||||||||||||||||||||||  | |||
Sbjct  106  AAGGAAACAGAGAGGGACGTTGCAACTAGTTCTTCAGGACAACTAGTTCCACGCTTACAA  165

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            ||||||||||||||||||||  ||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATG  195


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 83/95 (87%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GCGAAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTG  63
            |||||||||||||| || || ||| |||||||||||||||| ||| | ||||||||| | 
Sbjct  103  GCGAAGGAAACAGAAAGGGATGTTGCAACTAGTTCTTCAGGGCAATTGGTTCCACGTTTA  162

Query  64   CAAAAGATTAGCAAAAAGATGAATATGCCCATGAT  98
            |||||||| ||||| |||||||||||||| |||||
Sbjct  163  CAAAAGATCAGCAAGAAGATGAATATGCCTATGAT  197


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  7     AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
             ||||||||||| ||||| ||  || ||||||||||||| |||||||| ||||| ||||| 
Sbjct  8515  AAGGAAACAGAAAGAGATGTAGCAGCTAGTTCTTCAGGGCAACTAGTCCCACGCCTGCAG  8574

Query  67    AAGATTAGCAAAAAGATGAAT  87
             |||||||||||||||||||||
Sbjct  8575  AAGATTAGCAAAAAGATGAAT  8595


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            ||||||||||| ||||| ||  || ||||||||||||| |||||||| ||||| ||||| 
Sbjct  346  AAGGAAACAGAAAGAGATGTAGCAGCTAGTTCTTCAGGGCAACTAGTCCCACGCCTGCAG  405

Query  67   AAGATTAGCAAAAAGATGAAT  87
            |||||||||||||||||||||
Sbjct  406  AAGATTAGCAAAAAGATGAAT  426


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            ||||||||||| ||||| ||  || ||||||||||||| |||||||| ||||| ||||| 
Sbjct  271  AAGGAAACAGAAAGAGATGTAGCAGCTAGTTCTTCAGGGCAACTAGTCCCACGCCTGCAG  330

Query  67   AAGATTAGCAAAAAGATGAAT  87
            |||||||||||||||||||||
Sbjct  331  AAGATTAGCAAAAAGATGAAT  351


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 80/92 (86%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  8    AGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAA  67
            |||||||||| || || ||| |||||||||||||||||||| | ||||||||| | ||||
Sbjct  567  AGGAAACAGAAAGGGATGTTGCAACTAGTTCTTCAGGACAATTGGTTCCACGTTTACAAA  626

Query  68   AGATTAGCAAAAAGATGAATATGCCCATGATC  99
            |||||||||| ||||||||  |||| ||||||
Sbjct  627  AGATTAGCAAGAAGATGAACCTGCCTATGATC  658


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 78/90 (86%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| |||||  | ||||||||||||||||||||||| |||||  |||| 
Sbjct  718  AAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCAGGACAACTAGTCCCACGCTTGCAG  777

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            || ||| |||||||||||||| | ||||||
Sbjct  778  AAAATTGGCAAAAAGATGAATCTCCCCATG  807


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 69/78 (88%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  10   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAG  69
            |||||||| ||||||||  || ||||||||||||| ||| | || |||||||| ||||||
Sbjct  208  GAAACAGAAAGAGACGTCGCAGCTAGTTCTTCAGGGCAATTGGTGCCACGTCTACAAAAG  267

Query  70   ATTAGCAAAAAGATGAAT  87
            ||||||||||||||||||
Sbjct  268  ATTAGCAAAAAGATGAAT  285


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 77/90 (85%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| |||||  | ||||||||||||||||||||||| |||||  |||| 
Sbjct  457  AAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCAGGACAACTAGTCCCACGCTTGCAG  516

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            || ||  |||||||||||||| | ||||||
Sbjct  517  AAAATCGGCAAAAAGATGAATCTCCCCATG  546


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 77/90 (85%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||||||||| |||||  | ||||||||||||||||||||||| |||||  |||| 
Sbjct  457  AAGGAAACAGAGAGGGACGTCGCGACTAGTTCTTCAGGACAACTAGTCCCACGCTTGCAG  516

Query  67   AAGATTAGCAAAAAGATGAATATGCCCATG  96
            || ||  |||||||||||||| | ||||||
Sbjct  517  AAAATCGGCAAAAAGATGAATCTCCCCATG  546


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 68/79 (86%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  8    AGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAA  67
            |||||||||| || || ||| |||||||||||||||| ||| | ||||||||| | ||||
Sbjct  107  AGGAAACAGAAAGGGATGTTGCAACTAGTTCTTCAGGGCAATTGGTTCCACGTTTACAAA  166

Query  68   AGATTAGCAAAAAGATGAA  86
            |||| ||||| ||||||||
Sbjct  167  AGATCAGCAAGAAGATGAA  185


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 68/79 (86%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  8    AGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAA  67
            |||||||||| || || ||| |||||||||||||||| ||| | ||||||||| | ||||
Sbjct  107  AGGAAACAGAAAGGGATGTTGCAACTAGTTCTTCAGGGCAATTGGTTCCACGTTTACAAA  166

Query  68   AGATTAGCAAAAAGATGAA  86
            |||| ||||| ||||||||
Sbjct  167  AGATCAGCAAGAAGATGAA  185


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 68/79 (86%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  8    AGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAA  67
            |||||||||| || || ||| |||||||||||||||| ||| | ||||||||| | ||||
Sbjct  119  AGGAAACAGAAAGGGATGTTGCAACTAGTTCTTCAGGGCAATTGGTTCCACGTTTACAAA  178

Query  68   AGATTAGCAAAAAGATGAA  86
            |||| ||||| ||||||||
Sbjct  179  AGATCAGCAAGAAGATGAA  197


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 66/77 (85%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  10   GAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAG  69
            ||||||||||| |||||  |||||||||||||||| ||||| || || || || ||||||
Sbjct  154  GAAACAGAGAGGGACGTCGCAACTAGTTCTTCAGGGCAACTGGTGCCGCGCCTACAAAAG  213

Query  70   ATTAGCAAAAAGATGAA  86
            || ||||| ||||||||
Sbjct  214  ATCAGCAAGAAGATGAA  230


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 67/79 (84%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  9    GGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAA  68
            |||||| ||||| |||||| ||| ||| |||||||| ||| | ||||||||| | |||||
Sbjct  351  GGAAACGGAGAGGGACGTTGCAAATAGCTCTTCAGGGCAATTGGTTCCACGTTTACAAAA  410

Query  69   GATTAGCAAAAAGATGAAT  87
            ||| || ||||||||||||
Sbjct  411  GATCAGTAAAAAGATGAAT  429


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 56.0 bits (28),  Expect = 3e-05
 Identities = 67/80 (83%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||| ||||| || ||| ||| ||| |||||||| ||| | ||||||||| | |||
Sbjct  733  AAGGAAACGGAGAGGGATGTTGCAAATAGCTCTTCAGGGCAATTGGTTCCACGTTTACAA  792

Query  67   AAGATTAGCAAAAAGATGAA  86
            ||||| || |||||||||||
Sbjct  793  AAGATCAGTAAAAAGATGAA  812


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 62/75 (82%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  13   ACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATT  72
            |||||||| |||||  || |||| |||||||| ||| | || ||||| || || ||||||
Sbjct  187  ACAGAGAGGGACGTCGCAGCTAGCTCTTCAGGGCAATTGGTGCCACGGCTACAGAAGATT  246

Query  73   AGCAAAAAGATGAAT  87
            ||||| |||||||||
Sbjct  247  AGCAAGAAGATGAAT  261


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 62/75 (82%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  13   ACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATT  72
            |||||||| |||||  || |||| |||||||| ||| | || ||||| || || ||||||
Sbjct  175  ACAGAGAGGGACGTCGCAGCTAGCTCTTCAGGGCAATTGGTGCCACGGCTACAGAAGATT  234

Query  73   AGCAAAAAGATGAAT  87
            ||||| |||||||||
Sbjct  235  AGCAAGAAGATGAAT  249


>gb|BC111679.1| Bos taurus similar to pregnancy-zone protein, mRNA (cDNA clone 
MGC:136998 IMAGE:8175662), complete cds
Length=502

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  76   AAAAAGATGAATATGCCCATG  96
            |||||||||||||||||||||
Sbjct  261  AAAAAGATGAATATGCCCATG  281


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 66/81 (81%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  7    AAGGAAACAGAGAGAGACGTTTCAACTAGTTCTTCAGGACAACTAGTTCCACGTCTGCAA  66
            |||||||| |||||||| ||| || | || || ||||||||||| || |||||  | |||
Sbjct  298  AAGGAAACGGAGAGAGATGTTGCATCAAGCTCCTCAGGACAACTTGTGCCACGGTTACAA  357

Query  67   AAGATTAGCAAAAAGATGAAT  87
            ||||| || || |||||||||
Sbjct  358  AAGATCAGTAAGAAGATGAAT  378


>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence
Length=207136

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  1       GGAGCGAAGGAAACAGAGAGAGAC  24
               |||| |||||||||||||||||||
Sbjct  101463  GGAGGGAAGGAAACAGAGAGAGAC  101486


>gb|DQ360822.1| Soybean mosaic virus isolate XY polyprotein gene, partial cds
Length=846

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 32/36 (88%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  52   GTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAAT  87
            |||||||| |||||||||||||  | ||||||||||
Sbjct  172  GTTCCACGCCTGCAAAAGATTACGAGAAAGATGAAT  207


>gb|DQ360817.1| Soybean mosaic virus isolate BZ polyprotein gene, partial cds
Length=846

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  52   GTTCCACGTCTGCAAAAGAT  71
            ||||||||||||||||||||
Sbjct  172  GTTCCACGTCTGCAAAAGAT  191


>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
Length=195930

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  60      TCTGCAAAAGATTAGCAAAA  79
               ||||||||||||||||||||
Sbjct  125024  TCTGCAAAAGATTAGCAAAA  125043


>emb|AJ628755.1| Soybean mosaic virus partial polyprotein gene for NIb and coat 
proteins, genomic RNA, isolate YZ
Length=1733

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  52   GTTCCACGTCTGCAAAAGAT  71
            ||||||||||||||||||||
Sbjct  805  GTTCCACGTCTGCAAAAGAT  824


>gb|CP000749.1| Marinomonas sp. MWYL1, complete genome
Length=5100344

 Features flanking this part of subject sequence:
   75 bp at 5' side: H+transporting two-sector ATPase gamma subunit
   61 bp at 3' side: putative transcriptional regulator, Crp/Fnr family

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  72       TAGCAAAAAGATGAATATG  90
                |||||||||||||||||||
Sbjct  2226702  TAGCAAAAAGATGAATATG  2226720


>emb|AM442969.2| Vitis vinifera contig VV78X143548.5, whole genome shotgun sequence
Length=21217

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  75    CAAAAAGATGAATATGCCC  93
             |||||||||||||||||||
Sbjct  8218  CAAAAAGATGAATATGCCC  8236


>ref|XM_001009118.2| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00264680) 
partial mRNA
Length=10568

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  65    AAAAGATTAGCAAAAAGAT  83
             |||||||||||||||||||
Sbjct  4253  AAAAGATTAGCAAAAAGAT  4271


>ref|XM_001462540.1| Paramecium tetraurelia hypothetical protein (GSPATT00027533001) 
partial mRNA
Length=6075

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  60    TCTGCAAAAGATTAGCAAA  78
             |||||||||||||||||||
Sbjct  2106  TCTGCAAAAGATTAGCAAA  2124


>ref|XM_001347622.1| Plasmodium falciparum 3D7 gene 11-1 protein precursor (PF10_0374) 
partial mRNA
Length=31770

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  26    TTTCAACTAGTTCTTCAGG  44
             |||||||||||||||||||
Sbjct  5050  TTTCAACTAGTTCTTCAGG  5032


>gb|EF015903.1| Homo sapiens neuronal PAS domain protein 2 (NPAS2) gene, complete 
cds
Length=182675

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  6       GAAGGAAACAGAGAGAGAC  24
               |||||||||||||||||||
Sbjct  125979  GAAGGAAACAGAGAGAGAC  125961


>gb|AC189292.1| Brassica rapa subsp. pekinensis clone KBrB026E08, complete sequence
Length=112398

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  9      GGAAACAGAGAGAGACGTTTCAA  31
              ||||||| |||||||||||||||
Sbjct  26498  GGAAACAAAGAGAGACGTTTCAA  26476


>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome 
unknown, complete sequence
Length=199332

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  36      TTCTTCAGGACAACTAGTTCCAC  58
               |||||||||| ||||||||||||
Sbjct  122941  TTCTTCAGGAAAACTAGTTCCAC  122919


>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the 
complete sequence
Length=180450

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  26     TTTCAACTAGTTCTTCAGG  44
              |||||||||||||||||||
Sbjct  13071  TTTCAACTAGTTCTTCAGG  13053


>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete 
sequence
Length=217754

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  6       GAAGGAAACAGAGAGAGAC  24
               |||||||||||||||||||
Sbjct  203412  GAAGGAAACAGAGAGAGAC  203430


>emb|AL160032.14| Human DNA sequence from clone RP11-474L7 on chromosome 13 Contains 
the 3' end of the KLF12 gene for Kruppel-like factor 12, 
a novel gene and the 5' end of a novel gene and a CpG island, 
complete sequence
Length=181324

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  76      AAAAAGATGAATATGCCCA  94
               |||||||||||||||||||
Sbjct  125392  AAAAAGATGAATATGCCCA  125410



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2706422
Number of extensions: 140235
Number of successful extensions: 39828
Number of sequences better than 10: 5
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 39828
Number of HSP's successfully gapped: 5
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1WY9ZG016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|133-231
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   180    6e-43
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   172    2e-40
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   172    2e-40
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   172    2e-40
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   172    2e-40
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   141    5e-31
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   141    5e-31
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   141    5e-31
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   141    5e-31
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   141    5e-31
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   141    5e-31
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   141    5e-31
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   133    1e-28
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  89.7    2e-15
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  87.7    7e-15
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  87.7    7e-15
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  83.8    1e-13
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  83.8    1e-13
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  77.8    7e-12
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  67.9    7e-09
gb|EF547367.1|  South African passiflora virus polyprotein gen...  65.9    3e-08
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  65.9    3e-08
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  63.9    1e-07
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  63.9    1e-07
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  58.0    6e-06
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  58.0    6e-06
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  44.1    0.095
gb|BC111679.1|  Bos taurus similar to pregnancy-zone protein, ...  42.1    0.38 
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  42.1    0.38 
gb|DQ360822.1|  Soybean mosaic virus isolate XY polyprotein ge...  40.1    1.5  
gb|DQ360817.1|  Soybean mosaic virus isolate BZ polyprotein ge...  40.1    1.5  
gb|AC104137.5|  Homo sapiens BAC clone RP11-807H7 from 4, comp...  40.1    1.5  
emb|AJ628755.1|  Soybean mosaic virus partial polyprotein gene...  40.1    1.5  
gb|CP000749.1|  Marinomonas sp. MWYL1, complete genome             38.2    5.9  
emb|AM442969.2|  Vitis vinifera contig VV78X143548.5, whole ge...  38.2    5.9  
ref|XM_001009118.2|  Tetrahymena thermophila SB210 hypothetica...  38.2    5.9  
ref|XM_001462540.1|  Paramecium tetraurelia hypothetical prote...  38.2    5.9  
ref|XM_001388184.1|  Cryptosporidium parvum Iowa II hypothetic...  38.2    5.9  
emb|AJ580095.1|  Amaranthus leaf mottle virus partial gene for...  38.2    5.9  
emb|AJ580021.1|  Amaranthus leaf mottle virus partial polyprot...  38.2    5.9  
gb|AC154913.4|  Ornithorhynchus anatinus BAC clone OABb-535A1 ...  38.2    5.9  
emb|AL160032.14|  Human DNA sequence from clone RP11-474L7 on ...  38.2    5.9  
emb|AJ578645.1|EGU578645  Elaeis guineensis microsatellite DNA...  38.2    5.9  
gb|AC002524.1|  Homo sapiens x BAC GS1-257G1 (Genome Systems H...  38.2    5.9  
emb|AL513131.1|  Human DNA sequence from clone RP11-210H10 on ...  38.2    5.9  
gb|AC138656.1|  Homo sapiens BAC clone RP11-421F20 from 4, com...  38.2    5.9  
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  38.2    5.9  
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  38.2    5.9  
gb|AC135118.3|  Mus musculus BAC clone RP24-450N10 from 3, com...  38.2    5.9  
emb|AL590997.13|  Mouse DNA sequence from clone RP23-132J20 on...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  193  ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  231


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGCCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            |||||||||||||||||||||||||||||||| ||||||
Sbjct  193  ATGATCGCTGGTAGAGTGCTTCTCAATTTGGACCATTTG  231


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  AGTTCATCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||||||||||||||||||||||| ||| |||||||||||
Sbjct  193  ATGATCGCTGGTAGAGTGCTTCTGAATCTGGATCATTTG  231


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  161  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAATATGCCC  220

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            |||||||||||||||||||||||| ||||||| ||||||
Sbjct  221  ATGATCGCTGGTAGAGTGCTTCTCGATTTGGACCATTTG  259


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  136  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAATATGCCC  195

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            |||||||||||||||||||||||| ||||||| ||||||
Sbjct  196  ATGATCGCTGGTAGAGTGCTTCTCGATTTGGACCATTTG  234


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  161  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAATATGCCC  220

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            |||||||||||||||||||||||| ||||||| ||||||
Sbjct  221  ATGATCGCTGGTAGAGTGCTTCTCGATTTGGACCATTTG  259


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAACACGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||| ||||||||||||||||||||||| |||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTGCTTCTCAATCTGGATCATTTG  231


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||  | |||||||||||||||||||||||  |||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGCTTACAAAAGATTAGCAAAAAGATGAACTTGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||| ||||||||||||| |||||||||||||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTACTTCTCAATTTGGATCATTTG  231


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||||||||||||||  | |||||||||||||||||||||||  |||||
Sbjct  133  AGTTCTTCAGGGCAACTAGTTCCACGCTTACAAAAGATTAGCAAAAAGATGAACTTGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||| |||||||||||||||||||||||||||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  231


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||||||||||||||  | |||||||||||||||||||||||  |||||
Sbjct  133  AGTTCTTCAGGGCAACTAGTTCCACGCTTACAAAAGATTAGCAAAAAGATGAACTTGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||| |||||||||||||||||||||||||||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  231


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||||||||||||||  | |||||||||||||||||||||||  |||||
Sbjct  133  AGTTCTTCAGGGCAACTAGTTCCACGCTTACAAAAGATTAGCAAAAAGATGAACTTGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            ||| |||||||||||||||||||||||||||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  231


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAACATGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            || ||||||||| ||||  ||||||||||||| ||||||
Sbjct  193  ATAATCGCTGGTCGAGTAATTCTCAATTTGGACCATTTG  231


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct  136  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAACATGCCC  195

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            || ||||||||| ||||  ||||||||||||| ||||||
Sbjct  196  ATAATCGCTGGTCGAGTAATTCTCAATTTGGACCATTTG  234


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct  136  AGTTCTTCAGGACAACTAGTTCCACGTCTACAAAAGATTAGCAAAAAGATGAACATGCCC  195

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCATTTG  99
            || ||||||||| ||||  ||||||||||||| ||||||
Sbjct  196  ATAATCGCTGGTCGAGTAATTCTCAATTTGGACCATTTG  234


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||||||||||||||  | |||||||||||||||||||||||  |||||
Sbjct  133  AGTTCTTCAGGACAACTAGTTCCACGCTTACAAAAGATTAGCAAAAAGATGAACTTGCCC  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGATCA  95
            ||| ||||||||||||| |||||||||||||||||
Sbjct  193  ATGGTCGCTGGTAGAGTACTTCTCAATTTGGATCA  227


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 81/93 (87%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||| | ||||||||| | |||||||| ||||| ||||||||  | |||
Sbjct  145  AGTTCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGCAAGAAGATGAACCTCCCC  204

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  93
            ||| ||||||||||||| |||||||||||||||
Sbjct  205  ATGGTCGCTGGTAGAGTACTTCTCAATTTGGAT  237


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 80/92 (86%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||||||| | ||||||||| | |||||||||||||| ||||||||  |||| 
Sbjct  593  AGTTCTTCAGGACAATTGGTTCCACGTTTACAAAAGATTAGCAAGAAGATGAACCTGCCT  652

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGA  92
            ||||||||||| |||||  |||||||| ||||
Sbjct  653  ATGATCGCTGGCAGAGTCATTCTCAATCTGGA  684


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 80/92 (86%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||| | ||||||||| | |||||||| ||||| |||||||||||||| 
Sbjct  133  AGTTCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGCAAGAAGATGAATATGCCT  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGA  92
            ||||| ||||| |||||  |||||||||||||
Sbjct  193  ATGATTGCTGGCAGAGTCATTCTCAATTTGGA  224


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 66/74 (89%), Gaps = 0/74 (0%)
 Strand=Plus/Plus

Query  1     AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
             ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| | || 
Sbjct  8542  AGTTCTTCAGGGCAACTAGTCCCACGCCTGCAGAAGATTAGCAAAAAGATGAATCTTCCT  8601

Query  61    ATGATCGCTGGTAG  74
             ||| ||||||||||
Sbjct  8602  ATGGTCGCTGGTAG  8615


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 66/74 (89%), Gaps = 0/74 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| | || 
Sbjct  298  AGTTCTTCAGGGCAACTAGTCCCACGCCTGCAGAAGATTAGCAAAAAGATGAATCTTCCT  357

Query  61   ATGATCGCTGGTAG  74
            ||| ||||||||||
Sbjct  358  ATGGTCGCTGGTAG  371


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 63/71 (88%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| | || 
Sbjct  373  AGTTCTTCAGGGCAACTAGTCCCACGCCTGCAGAAGATTAGCAAAAAGATGAATCTCCCT  432

Query  61   ATGATCGCTGG  71
            ||| |||||||
Sbjct  433  ATGGTCGCTGG  443


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 49/54 (90%), Gaps = 0/54 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAAT  54
            ||||||||||| ||| | || |||||||| ||||||||||||||||||||||||
Sbjct  232  AGTTCTTCAGGGCAATTGGTGCCACGTCTACAAAAGATTAGCAAAAAGATGAAT  285


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 63/73 (86%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            |||||||||||||||||||| |||||  |||| || ||| |||||||||||||| | |||
Sbjct  745  AGTTCTTCAGGACAACTAGTCCCACGCTTGCAGAAAATTGGCAAAAAGATGAATCTCCCC  804

Query  61   ATGATCGCTGGTA  73
            ||| | |||||||
Sbjct  805  ATGGTAGCTGGTA  817


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 75/89 (84%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  4    TCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCCATG  63
            |||||||| ||| | ||||||||| | |||||||| || |||||||||||| | ||| ||
Sbjct  379  TCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGTAAAAAGATGAATCTCCCCGTG  438

Query  64   ATCGCTGGTAGAGTGCTTCTCAATTTGGA  92
            || ||||| |||||  |||||||||||||
Sbjct  439  ATTGCTGGCAGAGTTATTCTCAATTTGGA  467


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 77/92 (83%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||| | ||||||||| | |||||||| ||||| ||||||||  | || 
Sbjct  133  AGTTCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGCAAGAAGATGAACCTCCCT  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGA  92
            ||||| ||||| |||||  |||||||||||||
Sbjct  193  ATGATTGCTGGCAGAGTCATTCTCAATTTGGA  224


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 77/92 (83%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            ||||||||||| ||| | ||||||||| | |||||||| ||||| ||||||||  | || 
Sbjct  133  AGTTCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGCAAGAAGATGAACCTCCCT  192

Query  61   ATGATCGCTGGTAGAGTGCTTCTCAATTTGGA  92
            ||||| ||||| |||||  |||||||||||||
Sbjct  193  ATGATTGCTGGCAGAGTCATTCTCAATTTGGA  224


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 62/73 (84%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            |||||||||||||||||||| |||||  |||| || ||  |||||||||||||| | |||
Sbjct  484  AGTTCTTCAGGACAACTAGTCCCACGCTTGCAGAAAATCGGCAAAAAGATGAATCTCCCC  543

Query  61   ATGATCGCTGGTA  73
            ||| | |||||||
Sbjct  544  ATGGTAGCTGGTA  556


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 62/73 (84%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAATATGCCC  60
            |||||||||||||||||||| |||||  |||| || ||  |||||||||||||| | |||
Sbjct  484  AGTTCTTCAGGACAACTAGTCCCACGCTTGCAGAAAATCGGCAAAAAGATGAATCTCCCC  543

Query  61   ATGATCGCTGGTA  73
            ||| | |||||||
Sbjct  544  ATGGTAGCTGGTA  556


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 43/50 (86%), Gaps = 0/50 (0%)
 Strand=Plus/Plus

Query  4    TCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAA  53
            |||||||| ||| | ||||||||| | |||||||| || |||||||||||
Sbjct  763  TCTTCAGGGCAATTGGTTCCACGTTTACAAAAGATCAGTAAAAAGATGAA  812


>gb|BC111679.1| Bos taurus similar to pregnancy-zone protein, mRNA (cDNA clone 
MGC:136998 IMAGE:8175662), complete cds
Length=502

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  43   AAAAAGATGAATATGCCCATG  63
            |||||||||||||||||||||
Sbjct  261  AAAAAGATGAATATGCCCATG  281


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 45/53 (84%), Gaps = 0/53 (0%)
 Strand=Plus/Plus

Query  1    AGTTCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAA  53
            ||||||||||| ||||| || || || || |||||||| ||||| ||||||||
Sbjct  178  AGTTCTTCAGGGCAACTGGTGCCGCGCCTACAAAAGATCAGCAAGAAGATGAA  230


>gb|DQ360822.1| Soybean mosaic virus isolate XY polyprotein gene, partial cds
Length=846

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 32/36 (88%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  19   GTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAAT  54
            |||||||| |||||||||||||  | ||||||||||
Sbjct  172  GTTCCACGCCTGCAAAAGATTACGAGAAAGATGAAT  207


>gb|DQ360817.1| Soybean mosaic virus isolate BZ polyprotein gene, partial cds
Length=846

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  19   GTTCCACGTCTGCAAAAGAT  38
            ||||||||||||||||||||
Sbjct  172  GTTCCACGTCTGCAAAAGAT  191


>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
Length=195930

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  27      TCTGCAAAAGATTAGCAAAA  46
               ||||||||||||||||||||
Sbjct  125024  TCTGCAAAAGATTAGCAAAA  125043


>emb|AJ628755.1| Soybean mosaic virus partial polyprotein gene for NIb and coat 
proteins, genomic RNA, isolate YZ
Length=1733

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  19   GTTCCACGTCTGCAAAAGAT  38
            ||||||||||||||||||||
Sbjct  805  GTTCCACGTCTGCAAAAGAT  824


>gb|CP000749.1| Marinomonas sp. MWYL1, complete genome
Length=5100344

 Features flanking this part of subject sequence:
   75 bp at 5' side: H+transporting two-sector ATPase gamma subunit
   61 bp at 3' side: putative transcriptional regulator, Crp/Fnr family

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  39       TAGCAAAAAGATGAATATG  57
                |||||||||||||||||||
Sbjct  2226702  TAGCAAAAAGATGAATATG  2226720


>emb|AM442969.2| Vitis vinifera contig VV78X143548.5, whole genome shotgun sequence
Length=21217

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  42    CAAAAAGATGAATATGCCC  60
             |||||||||||||||||||
Sbjct  8218  CAAAAAGATGAATATGCCC  8236


>ref|XM_001009118.2| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00264680) 
partial mRNA
Length=10568

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  32    AAAAGATTAGCAAAAAGAT  50
             |||||||||||||||||||
Sbjct  4253  AAAAGATTAGCAAAAAGAT  4271


>ref|XM_001462540.1| Paramecium tetraurelia hypothetical protein (GSPATT00027533001) 
partial mRNA
Length=6075

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  27    TCTGCAAAAGATTAGCAAA  45
             |||||||||||||||||||
Sbjct  2106  TCTGCAAAAGATTAGCAAA  2124


>ref|XM_001388184.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_2440) 
mRNA, partial cds
Length=393

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  75   AGTGCTTCTCAATTTGGAT  93
            |||||||||||||||||||
Sbjct  187  AGTGCTTCTCAATTTGGAT  205


>emb|AJ580095.1| Amaranthus leaf mottle virus partial gene for polyprotein, genomic 
RNA, isolate I
Length=1777

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  81   TCTCAATTTGGATCATTTG  99
            |||||||||||||||||||
Sbjct  852  TCTCAATTTGGATCATTTG  870


>emb|AJ580021.1| Amaranthus leaf mottle virus partial polyprotein gene for Nib-CP 
polyprotein, genomic RNA, isolate AL
Length=1777

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  81   TCTCAATTTGGATCATTTG  99
            |||||||||||||||||||
Sbjct  852  TCTCAATTTGGATCATTTG  870


>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome 
unknown, complete sequence
Length=199332

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  3       TTCTTCAGGACAACTAGTTCCAC  25
               |||||||||| ||||||||||||
Sbjct  122941  TTCTTCAGGAAAACTAGTTCCAC  122919


>emb|AL160032.14| Human DNA sequence from clone RP11-474L7 on chromosome 13 Contains 
the 3' end of the KLF12 gene for Kruppel-like factor 12, 
a novel gene and the 5' end of a novel gene and a CpG island, 
complete sequence
Length=181324

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  43      AAAAAGATGAATATGCCCA  61
               |||||||||||||||||||
Sbjct  125392  AAAAAGATGAATATGCCCA  125410


>emb|AJ578645.1|EGU578645 Elaeis guineensis microsatellite DNA, clone mEgCIR3311
Length=324

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  46  AAGATGAATATGCCCATGA  64
           |||||||||||||||||||
Sbjct  18  AAGATGAATATGCCCATGA  36


>gb|AC002524.1| Homo sapiens x BAC GS1-257G1 (Genome Systems Human BAC Library) 
complete sequence
Length=202540

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  47     AGATGAATATGCCCATGAT  65
              |||||||||||||||||||
Sbjct  90076  AGATGAATATGCCCATGAT  90094


>emb|AL513131.1| Human DNA sequence from clone RP11-210H10 on chromosome 6 Contains 
a HSPC030 protein pseudogene and a novel gene, complete 
sequence
Length=108171

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  29     TGCAAAAGATTAGCAAAAA  47
              |||||||||||||||||||
Sbjct  86902  TGCAAAAGATTAGCAAAAA  86920


>gb|AC138656.1| Homo sapiens BAC clone RP11-421F20 from 4, complete sequence
Length=57169

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  29     TGCAAAAGATTAGCAAAAA  47
              |||||||||||||||||||
Sbjct  17901  TGCAAAAGATTAGCAAAAA  17883


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    TCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAAT  54
            |||||||| ||| | || ||||| || || ||||||||||| |||||||||
Sbjct  211  TCTTCAGGGCAATTGGTGCCACGGCTACAGAAGATTAGCAAGAAGATGAAT  261


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    TCTTCAGGACAACTAGTTCCACGTCTGCAAAAGATTAGCAAAAAGATGAAT  54
            |||||||| ||| | || ||||| || || ||||||||||| |||||||||
Sbjct  199  TCTTCAGGGCAATTGGTGCCACGGCTACAGAAGATTAGCAAGAAGATGAAT  249



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 1930895
Number of extensions: 94993
Number of successful extensions: 25449
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 25449
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1Y9T4F016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|166-264
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   180    6e-43
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   180    6e-43
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   170    6e-40
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   170    6e-40
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   170    6e-40
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   157    9e-36
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   155    4e-35
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   155    4e-35
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   155    4e-35
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   147    9e-33
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   139    2e-30
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   133    1e-28
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   133    1e-28
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   133    1e-28
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   107    8e-21
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   107    8e-21
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  99.6    2e-18
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  83.8    1e-13
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  83.8    1e-13
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  71.9    4e-10
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  61.9    4e-07
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  61.9    4e-07
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  61.9    4e-07
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  58.0    6e-06
gb|AF022444.1|AF022444  Ceratobium mosaic potyvirus strain Cer...  50.1    0.002
gb|AF022445.1|AF022445  Ceratobium mosaic potyvirus strain Cer...  48.1    0.006
gb|AF022443.1|AF022443  Ceratobium mosaic potyvirus strain Cer...  48.1    0.006
emb|AJ580095.1|  Amaranthus leaf mottle virus partial gene for...  46.1    0.024
emb|AJ580021.1|  Amaranthus leaf mottle virus partial polyprot...  46.1    0.024
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  46.1    0.024
gb|BC111679.1|  Bos taurus similar to pregnancy-zone protein, ...  42.1    0.38 
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  42.1    0.38 
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  40.1    1.5  
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  40.1    1.5  
ref|XM_001445986.1|  Paramecium tetraurelia hypothetical prote...  40.1    1.5  
gb|CP000568.1|  Clostridium thermocellum ATCC 27405, complete ...  40.1    1.5  
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  40.1    1.5  
gb|AF022446.1|AF022446  Ceratobium mosaic potyvirus strain Cer...  40.1    1.5  
gb|AF022442.1|AF022442  Ceratobium mosaic potyvirus strain Cer...  40.1    1.5  
emb|AM039800.1|  Fritillary virus Y complete virion genome, is...  40.1    1.5  
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  38.2    5.9  
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  38.2    5.9  
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  38.2    5.9  
gb|DQ898194.1|  Hardenbergia mosaic virus isolate MU-1A polypr...  38.2    5.9  
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  38.2    5.9  
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  38.2    5.9  
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  38.2    5.9  
gb|EU009112.1|  Tetrahymena thermophila RNA-dependent RNA poly...  38.2    5.9  
gb|CP000749.1|  Marinomonas sp. MWYL1, complete genome             38.2    5.9  
emb|AM442969.2|  Vitis vinifera contig VV78X143548.5, whole ge...  38.2    5.9  
ref|XM_001388184.1|  Cryptosporidium parvum Iowa II hypothetic...  38.2    5.9  
ref|XM_001012858.1|  Tetrahymena thermophila SB210 hypothetica...  38.2    5.9  
gb|AC101689.12|  Mus musculus chromosome 1, clone RP23-217C21,...  38.2    5.9  
gb|AC122370.4|  Mus musculus BAC clone RP23-459B8 from chromos...  38.2    5.9  
gb|AC122195.4|  Mus musculus BAC clone RP23-49D1 from 8, compl...  38.2    5.9  
emb|AL160032.14|  Human DNA sequence from clone RP11-474L7 on ...  38.2    5.9  
emb|AJ578645.1|EGU578645  Elaeis guineensis microsatellite DNA...  38.2    5.9  
gb|AC002524.1|  Homo sapiens x BAC GS1-257G1 (Genome Systems H...  38.2    5.9  
gb|DQ075247.1|  Dianella chlorotic mottle virus coat protein g...  38.2    5.9  
emb|CR380952.1|  Candida glabrata strain CBS138 chromosome F c...  38.2    5.9  
gb|AF328755.1|AF328755  Bean common mosaic virus isolate Guana...  38.2    5.9  
gb|AC115029.12|  Mus musculus chromosome 3, clone RP24-248I17,...  38.2    5.9  
emb|AL590997.13|  Mouse DNA sequence from clone RP23-132J20 on...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  226  CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  264


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct  166  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTGAATCTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  226  CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  264


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  166  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAC  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            ||||||||||||||||||||||||||||| |||||||||
Sbjct  226  CATTTGATAGAATACAAGCCAGCACAAATCGATCTATAT  264


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  170 bits (86),  Expect = 6e-40
 Identities = 95/98 (96%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct  194  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCGATTTGGAC  253

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            ||||||||||||||||| ||||||||||||||||||||
Sbjct  254  CATTTGATAGAATACAAACCAGCACAAATTGATCTATA  291


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  170 bits (86),  Expect = 6e-40
 Identities = 95/98 (96%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct  169  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCGATTTGGAC  228

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            ||||||||||||||||| ||||||||||||||||||||
Sbjct  229  CATTTGATAGAATACAAACCAGCACAAATTGATCTATA  266


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  170 bits (86),  Expect = 6e-40
 Identities = 95/98 (96%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct  194  AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCGATTTGGAC  253

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            ||||||||||||||||| ||||||||||||||||||||
Sbjct  254  CATTTGATAGAATACAAACCAGCACAAATTGATCTATA  291


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            |||||||||||||||||||| | ||||||| ||||||||||||||||||||||| |||||
Sbjct  166  AAGATTAGCAAAAAGATGAACACGCCCATGGTCGCTGGTAGAGTGCTTCTCAATCTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  226  CATTTGATAGAATATAAGCCAGCACAAATTGATCTATAT  264


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATGGTCGCTGGTAGAGTGCTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            |||||||||||||| |||||||| ||||||||||||||
Sbjct  226  CATTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  263


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATGGTCGCTGGTAGAGTGCTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            |||||||||||||| |||||||| ||||||||||||||
Sbjct  226  CATTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  263


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATGGTCGCTGGTAGAGTGCTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            |||||||||||||| |||||||| ||||||||||||||
Sbjct  226  CATTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  263


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  147 bits (74),  Expect = 9e-33
 Identities = 92/98 (93%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATGGTCGCTGGTAGAGTACTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            |||||||||||||| |||||||| ||||||||||||||
Sbjct  226  CATTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  263


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 91/98 (92%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||
Sbjct  166  AAGATTAGCAAAAAGATGAACTTGCCCATGGTCGCTGGTAGAGTACTTCTCAATTTGGAT  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            || ||||||||||| |||||||| ||||||||||||||
Sbjct  226  CACTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  263


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            |||||||||||||||||||| |||||||| ||||||||| ||||  ||||||||||||| 
Sbjct  166  AAGATTAGCAAAAAGATGAACATGCCCATAATCGCTGGTCGAGTAATTCTCAATTTGGAC  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||||||||||||||| || |||||||||
Sbjct  226  CATTTGATAGAATACAAGCCAGCACAGATCGATCTATAT  264


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            |||||||||||||||||||| |||||||| ||||||||| ||||  ||||||||||||| 
Sbjct  169  AAGATTAGCAAAAAGATGAACATGCCCATAATCGCTGGTCGAGTAATTCTCAATTTGGAC  228

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||||||||||||||| || |||||||||
Sbjct  229  CATTTGATAGAATACAAGCCAGCACAGATCGATCTATAT  267


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            |||||||||||||||||||| |||||||| ||||||||| ||||  ||||||||||||| 
Sbjct  169  AAGATTAGCAAAAAGATGAACATGCCCATAATCGCTGGTCGAGTAATTCTCAATTTGGAC  228

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATAT  99
            |||||||||||||||||||||||||| || |||||||||
Sbjct  229  CATTTGATAGAATACAAGCCAGCACAGATCGATCTATAT  267


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  107 bits (54),  Expect = 8e-21
 Identities = 87/98 (88%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| ||||| |||||||||||||| ||||| ||||| |||||  ||||||||||||| 
Sbjct  166  AAGATCAGCAAGAAGATGAATATGCCTATGATTGCTGGCAGAGTCATTCTCAATTTGGAC  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            || |||||||| |||||||||||||||||||| |||||
Sbjct  226  CACTTGATAGAGTACAAGCCAGCACAAATTGACCTATA  263


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  107 bits (54),  Expect = 8e-21
 Identities = 87/98 (88%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| ||||| ||||||||  | |||||| ||||||||||||| |||||||||||||||
Sbjct  178  AAGATCAGCAAGAAGATGAACCTCCCCATGGTCGCTGGTAGAGTACTTCTCAATTTGGAT  237

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
             | ||||||||||| |||||||| ||||||||||||||
Sbjct  238  AACTTGATAGAATATAAGCCAGCGCAAATTGATCTATA  275


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 99.6 bits (50),  Expect = 2e-18
 Identities = 86/98 (87%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||| ||||||||  |||| ||||||||||| |||||  |||||||| |||| 
Sbjct  626  AAGATTAGCAAGAAGATGAACCTGCCTATGATCGCTGGCAGAGTCATTCTCAATCTGGAC  685

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            || |||||||| |||||||||||||||||||| |||||
Sbjct  686  CACTTGATAGAGTACAAGCCAGCACAAATTGACCTATA  723


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 84/98 (85%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| ||||| ||||||||  | || ||||| ||||| |||||  ||||||||||||| 
Sbjct  166  AAGATCAGCAAGAAGATGAACCTCCCTATGATTGCTGGCAGAGTCATTCTCAATTTGGAC  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            || |||||||| |||||||||||||||||||| |||||
Sbjct  226  CACTTGATAGAGTACAAGCCAGCACAAATTGACCTATA  263


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 84/98 (85%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| ||||| ||||||||  | || ||||| ||||| |||||  ||||||||||||| 
Sbjct  166  AAGATCAGCAAGAAGATGAACCTCCCTATGATTGCTGGCAGAGTCATTCTCAATTTGGAC  225

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            || |||||||| |||||||||||||||||||| |||||
Sbjct  226  CACTTGATAGAGTACAAGCCAGCACAAATTGACCTATA  263


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 78/92 (84%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| || |||||||||||| | ||| |||| ||||| |||||  ||||||||||||| 
Sbjct  409  AAGATCAGTAAAAAGATGAATCTCCCCGTGATTGCTGGCAGAGTTATTCTCAATTTGGAC  468

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGA  92
            ||  |||||||||| |||||||| ||||||||
Sbjct  469  CACCTGATAGAATATAAGCCAGCGCAAATTGA  500


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 79/95 (83%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1     AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
             ||||||||||||||||||||| | || ||| ||||||||||  |  | || ||| | |||
Sbjct  8575  AAGATTAGCAAAAAGATGAATCTTCCTATGGTCGCTGGTAGGCTTATCCTTAATATTGAT  8634

Query  61    CATTTGATAGAATACAAGCCAGCACAAATTGATCT  95
             |||||||||||||| ||||||  ||| ||||||||
Sbjct  8635  CATTTGATAGAATATAAGCCAAAACAGATTGATCT  8669


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 40/43 (93%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  56   TGGATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATA  98
            |||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct  413  TGGATCATTTGATAGAGTACAAACCAGCGCAAATTGATCTATA  455


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 79/95 (83%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||| | || ||| ||||||||||  |  | || ||| | |||
Sbjct  331  AAGATTAGCAAAAAGATGAATCTTCCTATGGTCGCTGGTAGGCTTATCCTTAATATTGAT  390

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCT  95
            |||||||||||||| ||||||  ||| ||||||||
Sbjct  391  CATTTGATAGAATATAAGCCAAAACAGATTGATCT  425


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 68/81 (83%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||||||||||||||||||| | || ||| ||||||| ||  |  | |||||| | |||
Sbjct  406  AAGATTAGCAAAAAGATGAATCTCCCTATGGTCGCTGGCAGGCTTATCCTCAATATCGAT  465

Query  61   CATTTGATAGAATACAAGCCA  81
            ||||||||||| |||||||||
Sbjct  466  CATTTGATAGAGTACAAGCCA  486


>gb|AF022444.1|AF022444 Ceratobium mosaic potyvirus strain CerMV-6 polyprotein (NIb/CP) 
gene, partial cds
Length=1557

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 28/29 (96%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  49   CTCAATTTGGATCATTTGATAGAATACAA  77
            |||||||||||||||||||| ||||||||
Sbjct  853  CTCAATTTGGATCATTTGATTGAATACAA  881


>gb|AF022445.1|AF022445 Ceratobium mosaic potyvirus strain CerMV-18 polyprotein (NIb/CP) 
gene, partial cds
Length=1695

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 30/32 (93%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  49   CTCAATTTGGATCATTTGATAGAATACAAGCC  80
            |||||||||||||||||||| || ||||||||
Sbjct  853  CTCAATTTGGATCATTTGATTGAGTACAAGCC  884


>gb|AF022443.1|AF022443 Ceratobium mosaic potyvirus strain CerMV-1 polyprotein (NIb/CP) 
gene, partial cds
Length=1555

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  53   ATTTGGATCATTTGATAGAATACAAGCC  80
            |||||||||||||||| |||||||||||
Sbjct  857  ATTTGGATCATTTGATTGAATACAAGCC  884


>emb|AJ580095.1| Amaranthus leaf mottle virus partial gene for polyprotein, genomic 
RNA, isolate I
Length=1777

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  48   TCTCAATTTGGATCATTTGATAGAATA  74
            ||||||||||||||||||| |||||||
Sbjct  852  TCTCAATTTGGATCATTTGTTAGAATA  878


>emb|AJ580021.1| Amaranthus leaf mottle virus partial polyprotein gene for Nib-CP 
polyprotein, genomic RNA, isolate AL
Length=1777

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  48   TCTCAATTTGGATCATTTGATAGAATA  74
            ||||||||||||||||||| |||||||
Sbjct  852  TCTCAATTTGGATCATTTGTTAGAATA  878


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 32/35 (91%), Gaps = 0/35 (0%)
 Strand=Plus/Plus

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGATCT  95
            |||||||| || ||||| |||||||||||||||||
Sbjct  271  CATTTGATTGAGTACAAACCAGCACAAATTGATCT  305


>gb|BC111679.1| Bos taurus similar to pregnancy-zone protein, mRNA (cDNA clone 
MGC:136998 IMAGE:8175662), complete cds
Length=502

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  10   AAAAAGATGAATATGCCCATG  30
            |||||||||||||||||||||
Sbjct  261  AAAAAGATGAATATGCCCATG  281


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAAT  21
            |||||||||||||||||||||
Sbjct  265  AAGATTAGCAAAAAGATGAAT  285


>gb|DQ898199.1| Hardenbergia mosaic virus isolate MR-21 polyprotein gene, partial 
cds
Length=834

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 26/28 (92%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAAGCCAG  82
            ||||||||| | ||||||||||||||||
Sbjct  226  TTGGATCATCTCATAGAATACAAGCCAG  253


>gb|DQ898198.1| Hardenbergia mosaic virus isolate MR-13 polyprotein gene, partial 
cds
Length=834

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 26/28 (92%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAAGCCAG  82
            ||||||||| | ||||||||||||||||
Sbjct  226  TTGGATCATCTCATAGAATACAAGCCAG  253


>ref|XM_001445986.1| Paramecium tetraurelia hypothetical protein (GSPATT00001667001) 
partial mRNA
Length=408

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  54  TTTGGATCATTTGATAGAAT  73
           ||||||||||||||||||||
Sbjct  79  TTTGGATCATTTGATAGAAT  98


>gb|CP000568.1| Clostridium thermocellum ATCC 27405, complete genome
Length=3843301

 Features flanking this part of subject sequence:
   81 bp at 5' side: hypothetical protein
   223 bp at 3' side: hypothetical protein

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  60       TCATTTGATAGAATACAAGC  79
                ||||||||||||||||||||
Sbjct  1369970  TCATTTGATAGAATACAAGC  1369951


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 74/92 (80%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    AAGATTAGCAAAAAGATGAATATGCCCATGATCGCTGGTAGAGTGCTTCTCAATTTGGAT  60
            ||||| || |||||||||||  | |||||||| | ||| | |||  |||||||||| || 
Sbjct  793  AAGATCAGTAAAAAGATGAACCTCCCCATGATTGATGGCAAAGTTATTCTCAATTTAGAC  852

Query  61   CATTTGATAGAATACAAGCCAGCACAAATTGA  92
            ||| ||||||| || |||||| | ||||||||
Sbjct  853  CATCTGATAGACTATAAGCCATCGCAAATTGA  884


>gb|AF022446.1|AF022446 Ceratobium mosaic potyvirus strain CerMV-19 polyprotein (NIb/CP) 
gene, partial cds
Length=1685

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  49   CTCAATTTGGATCATTTGATAGAATACAAGCC  80
            ||||| |||||||||||||| || ||||||||
Sbjct  853  CTCAACTTGGATCATTTGATTGAGTACAAGCC  884


>gb|AF022442.1|AF022442 Ceratobium mosaic potyvirus strain CerMV-13 polyprotein (NIb/CP) 
gene, partial cds
Length=1720

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  49   CTCAATTTGGATCATTTGATAGAATACAAGCC  80
            ||||||||||||||||| || || ||||||||
Sbjct  853  CTCAATTTGGATCATTTAATTGAGTACAAGCC  884


>emb|AM039800.1| Fritillary virus Y complete virion genome, isolate Pan'an
Length=9656

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  58    GATCATTTGATAGAATACAA  77
             ||||||||||||||||||||
Sbjct  8804  GATCATTTGATAGAATACAA  8823


>gb|EF375608.1| Hardenbergia mosaic virus isolate Can1-2 coat protein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898200.1| Hardenbergia mosaic virus isolate Med-1 polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898196.1| Hardenbergia mosaic virus isolate MU-2A polyprotein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898194.1| Hardenbergia mosaic virus isolate MU-1A polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898192.1| Hardenbergia mosaic virus isolate Co-1 polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898190.1| Hardenbergia mosaic virus isolate BB-2 polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|DQ898189.1| Hardenbergia mosaic virus isolate BB-1 polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  55   TTGGATCATTTGATAGAATACAA  77
            |||||||||||||| ||||||||
Sbjct  220  TTGGATCATTTGATTGAATACAA  242


>gb|EU009112.1| Tetrahymena thermophila RNA-dependent RNA polymerase-associated 
nucleotidyltransferase 1 (RDN1) mRNA, complete cds; macronuclear
Length=1632

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  54   TTTGGATCATTTGATAGAA  72
            |||||||||||||||||||
Sbjct  360  TTTGGATCATTTGATAGAA  378


>gb|CP000749.1| Marinomonas sp. MWYL1, complete genome
Length=5100344

 Features flanking this part of subject sequence:
   75 bp at 5' side: H+transporting two-sector ATPase gamma subunit
   61 bp at 3' side: putative transcriptional regulator, Crp/Fnr family

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  6        TAGCAAAAAGATGAATATG  24
                |||||||||||||||||||
Sbjct  2226702  TAGCAAAAAGATGAATATG  2226720



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 1756102
Number of extensions: 99581
Number of successful extensions: 28195
Number of sequences better than 10: 3
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 28195
Number of HSP's successfully gapped: 4
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY1ZNDBV016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|199-297
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   165    4e-38
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   165    4e-38
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   165    4e-38
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   165    4e-38
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   149    2e-33
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   149    2e-33
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   141    5e-31
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   141    5e-31
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   141    5e-31
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   141    5e-31
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   141    5e-31
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   141    5e-31
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   141    5e-31
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   133    1e-28
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   123    1e-25
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   123    1e-25
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   123    1e-25
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   115    3e-23
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   101    5e-19
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  83.8    1e-13
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  83.8    1e-13
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  83.8    1e-13
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  79.8    2e-12
gb|EF547367.1|  South African passiflora virus polyprotein gen...  77.8    7e-12
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  69.9    2e-09
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  69.9    2e-09
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  69.9    2e-09
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  63.9    1e-07
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  58.0    6e-06
gb|AF328755.1|AF328755  Bean common mosaic virus isolate Guana...  52.0    4e-04
gb|AF022444.1|AF022444  Ceratobium mosaic potyvirus strain Cer...  50.1    0.002
gb|AF022445.1|AF022445  Ceratobium mosaic potyvirus strain Cer...  48.1    0.006
gb|AF022443.1|AF022443  Ceratobium mosaic potyvirus strain Cer...  48.1    0.006
emb|AJ580095.1|  Amaranthus leaf mottle virus partial gene for...  46.1    0.024
emb|AJ580021.1|  Amaranthus leaf mottle virus partial polyprot...  46.1    0.024
gb|EU028330.1|  Glycine max clone BAC gmw1-29F06 genomic sequence  42.1    0.38 
gb|EU028329.1|  Glycine max clone BAC gmw1-24M16 genomic sequence  42.1    0.38 
emb|AM421021.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
emb|AM421019.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
emb|AM421018.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
gb|DQ925424.1|  Bean common mosaic virus strain Blackeye isola...  42.1    0.38 
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  40.1    1.5  
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  40.1    1.5  
ref|XM_001445986.1|  Paramecium tetraurelia hypothetical prote...  40.1    1.5  
gb|CP000568.1|  Clostridium thermocellum ATCC 27405, complete ...  40.1    1.5  
dbj|AB232919.1|  Oryzias latipes hox gene cluster, complete cd...  40.1    1.5  
gb|AF022446.1|AF022446  Ceratobium mosaic potyvirus strain Cer...  40.1    1.5  
gb|AF022442.1|AF022442  Ceratobium mosaic potyvirus strain Cer...  40.1    1.5  
emb|AM039800.1|  Fritillary virus Y complete virion genome, is...  40.1    1.5  
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  38.2    5.9  
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  38.2    5.9  
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  38.2    5.9  
gb|DQ898194.1|  Hardenbergia mosaic virus isolate MU-1A polypr...  38.2    5.9  
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  38.2    5.9  
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  38.2    5.9  
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  38.2    5.9  
gb|EU009112.1|  Tetrahymena thermophila RNA-dependent RNA poly...  38.2    5.9  
ref|XM_001388184.1|  Cryptosporidium parvum Iowa II hypothetic...  38.2    5.9  
ref|XM_001012858.1|  Tetrahymena thermophila SB210 hypothetica...  38.2    5.9  
emb|CR848841.19|  Zebrafish DNA sequence from clone DKEY-202I1...  38.2    5.9  
gb|AC101689.12|  Mus musculus chromosome 1, clone RP23-217C21,...  38.2    5.9  
gb|AC122370.4|  Mus musculus BAC clone RP23-459B8 from chromos...  38.2    5.9  
gb|AC122195.4|  Mus musculus BAC clone RP23-49D1 from 8, compl...  38.2    5.9  
emb|AL158153.10|  Human DNA sequence from clone RP11-373A9 on ...  38.2    5.9  
emb|AL138776.10|  Human DNA sequence from clone RP11-20H6 on c...  38.2    5.9  
gb|DQ075247.1|  Dianella chlorotic mottle virus coat protein g...  38.2    5.9  
emb|CR380952.1|  Candida glabrata strain CBS138 chromosome F c...  38.2    5.9  
emb|CR545467.4|  Zebrafish DNA sequence from clone CH211-196P1...  38.2    5.9  
gb|AC115029.12|  Mus musculus chromosome 3, clone RP24-248I17,...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  259  CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  297


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATATAAGCCAGCGCAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| |||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCAG  293


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATATAAGCCAGCGCAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| |||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCAG  293


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strant=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATATAAGCCAGCGCAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| |||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCAG  293


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTGAATCTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            ||||||||||||||||| ||||||||||| |||||||||
Sbjct  259  CTATATAACACCAGAGCGTCAAAGACACAACTCAGTAAA  297


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATCTGGATCATTTGATAGAATATAAGCCAGCACAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            |||||||||||||||||||||||||| || |||||||||
Sbjct  259  CTATATAACACCAGAGCATCAAAGACGCAACTCAGTAAA  297


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 90/95 (94%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct  199  GCTGGTAGAGTACTTCTCAATTTGGATCATTTGATAGAATATAAGCCAGCGCAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| |||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCTTCAAAGACACAGCTCAG  293


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 90/95 (94%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct  199  GCTGGTAGAGTGCTTCTCAATTTGGACCATTTGATAGAATACAAGCCAGCACAAATCGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            |||||||||||||| ||||||||||| || |||||
Sbjct  259  CTATATAACACCAGGGCATCAAAGACGCAACTCAG  293


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 89/95 (93%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct  199  GCTGGTAGAGTACTTCTCAATTTGGATCACTTGATAGAATATAAGCCAGCGCAAATTGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| |||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCTTCAAAGACACAGCTCAG  293


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||| ||||  ||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct  199  GCTGGTCGAGTAATTCTCAATTTGGACCATTTGATAGAATACAAGCCAGCACAGATCGAT  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            |||||||||||||||||||||| ||||||||||||||||
Sbjct  259  CTATATAACACCAGAGCATCAAGGACACAGCTCAGTAAA  297


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||| ||||  ||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct  202  GCTGGTCGAGTAATTCTCAATTTGGACCATTTGATAGAATACAAGCCAGCACAGATCGAT  261

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            |||||||||||||||||||||| ||||||||||||||||
Sbjct  262  CTATATAACACCAGAGCATCAAGGACACAGCTCAGTAAA  300


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 89/95 (93%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||
Sbjct  227  GCTGGTAGAGTGCTTCTCGATTTGGACCATTTGATAGAATACAAACCAGCACAAATTGAT  286

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| ||||||||||| |||||
Sbjct  287  CTATACAACACCAGAGCTTCAAAGACACAACTCAG  321


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 89/95 (93%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||
Sbjct  202  GCTGGTAGAGTGCTTCTCGATTTGGACCATTTGATAGAATACAAACCAGCACAAATTGAT  261

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| ||||||||||| |||||
Sbjct  262  CTATACAACACCAGAGCTTCAAAGACACAACTCAG  296


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||| ||||  ||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct  202  GCTGGTCGAGTAATTCTCAATTTGGACCATTTGATAGAATACAAGCCAGCACAGATCGAT  261

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            |||||||||||||||||||||| ||||||||||||||||
Sbjct  262  CTATATAACACCAGAGCATCAAGGACACAGCTCAGTAAA  300


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 89/95 (93%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||
Sbjct  227  GCTGGTAGAGTGCTTCTCGATTTGGACCATTTGATAGAATACAAACCAGCACAAATTGAT  286

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| ||||||||||| |||||
Sbjct  287  CTATACAACACCAGAGCTTCAAAGACACAACTCAG  321


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||||||||| ||||||||||||||| | ||||||||||| |||||||| |||||||||
Sbjct  211  GCTGGTAGAGTACTTCTCAATTTGGATAACTTGATAGAATATAAGCCAGCGCAAATTGAT  270

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAG  95
            ||||| ||||||||||| |||||||||||||||||
Sbjct  271  CTATACAACACCAGAGCTTCAAAGACACAGCTCAG  305


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 86/94 (91%), Gaps = 0/94 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||| |||||  ||||||||||||| || |||||||| |||||||||||||||||||| 
Sbjct  199  GCTGGCAGAGTCATTCTCAATTTGGACCACTTGATAGAGTACAAGCCAGCACAAATTGAC  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCA  94
            ||||| ||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCA  292


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 86/94 (91%), Gaps = 0/94 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||| |||||  ||||||||||||| || |||||||| |||||||||||||||||||| 
Sbjct  199  GCTGGCAGAGTCATTCTCAATTTGGACCACTTGATAGAGTACAAGCCAGCACAAATTGAC  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCA  94
            ||||| ||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCA  292


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 86/94 (91%), Gaps = 0/94 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||| |||||  ||||||||||||| || |||||||| |||||||||||||||||||| 
Sbjct  199  GCTGGCAGAGTCATTCTCAATTTGGACCACTTGATAGAGTACAAGCCAGCACAAATTGAC  258

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCA  94
            ||||| ||||||||||||||||||||||||||||
Sbjct  259  CTATACAACACCAGAGCATCAAAGACACAGCTCA  292


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 85/94 (90%), Gaps = 0/94 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||| |||||  |||||||| |||| || |||||||| |||||||||||||||||||| 
Sbjct  659  GCTGGCAGAGTCATTCTCAATCTGGACCACTTGATAGAGTACAAGCCAGCACAAATTGAC  718

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCA  94
            ||||| ||||||||||||||||||||||||||||
Sbjct  719  CTATACAACACCAGAGCATCAAAGACACAGCTCA  752


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 87/99 (87%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GCTGGTAGAGTGCTTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGAT  60
            ||||| |||||  ||||||||||||| ||  |||||||||| |||||||| |||||||| 
Sbjct  442  GCTGGCAGAGTTATTCTCAATTTGGACCACCTGATAGAATATAAGCCAGCGCAAATTGAC  501

Query  61   CTATATAACACCAGAGCATCAAAGACACAGCTCAGTAAA  99
            || || |||||||| ||||||||||||||||||||||||
Sbjct  502  CTGTACAACACCAGGGCATCAAAGACACAGCTCAGTAAA  540


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 75/86 (87%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  14   TTCTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCA  73
            |||||||||| || ||| ||||||| || |||||| | |||||||| || ||||||||||
Sbjct  839  TTCTCAATTTAGACCATCTGATAGACTATAAGCCATCGCAAATTGACCTGTATAACACCA  898

Query  74   GAGCATCAAAGACACAGCTCAGTAAA  99
            | ||||| ||||||||||||||||||
Sbjct  899  GGGCATCTAAGACACAGCTCAGTAAA  924


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 60/66 (90%), Gaps = 0/66 (0%)
 Strand=Plus/Plus

Query  25    GATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAG  84
             ||||||||||||||||| ||||||  ||| |||||||| |||||||||||||||||||||
Sbjct  8632  GATCATTTGATAGAATATAAGCCAAAACAGATTGATCTGTATAACACCAGAGCATCAAAG  8691

Query  85    ACACAG  90
              |||||
Sbjct  8692  GCACAG  8697


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 60/66 (90%), Gaps = 0/66 (0%)
 Strand=Plus/Plus

Query  25   GATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAG  84
            ||||||||||||||||| ||||||  ||| |||||||| |||||||||||||||||||||
Sbjct  388  GATCATTTGATAGAATATAAGCCAAAACAGATTGATCTGTATAACACCAGAGCATCAAAG  447

Query  85   ACACAG  90
             |||||
Sbjct  448  GCACAG  453


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 55/60 (91%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  23   TGGATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAA  82
            |||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||
Sbjct  413  TGGATCATTTGATAGAGTACAAACCAGCGCAAATTGATCTATACAACACTAGAGCATCAA  472


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 60/67 (89%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  28   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACA  87
            ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||||||||
Sbjct  838  CATTTAATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACA  897

Query  88   CAGCTCA  94
            |||||||
Sbjct  898  CAGCTCA  904


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 56/63 (88%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  28   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACA  87
            ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||||||||
Sbjct  577  CATTTAATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACA  636

Query  88   CAG  90
            |||
Sbjct  637  CAG  639


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 65/75 (86%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  16   CTCAATTTGGATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGA  75
            |||||| | |||||||||||||| |||||||||  ||| |||||  | ||||||||||||
Sbjct  454  CTCAATATCGATCATTTGATAGAGTACAAGCCAAAACAGATTGACTTGTATAACACCAGA  513

Query  76   GCATCAAAGACACAG  90
            ||||||||| |||||
Sbjct  514  GCATCAAAGGCACAG  528


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 56/63 (88%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  28   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACA  87
            ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||||||||
Sbjct  577  CATTTAATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACA  636

Query  88   CAG  90
            |||
Sbjct  637  CAG  639


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 50/56 (89%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  28   CATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAA  83
            |||||||| || ||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct  271  CATTTGATTGAGTACAAACCAGCACAAATTGATCTGTATAACACAAGAGCCTCAAA  326


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 50/57 (87%), Gaps = 0/57 (0%)
 Strand=Plus/Plus

Query  26   ATCATTTGATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAA  82
            ||||||| ||||| || |||||||| |||||||| ||||| ||||||||||| ||||
Sbjct  323  ATCATTTAATAGAGTATAAGCCAGCGCAAATTGACCTATACAACACCAGAGCCTCAA  379


>gb|AF328755.1|AF328755 Bean common mosaic virus isolate Guanajuato polyprotein mRNA, 
partial cds
Length=858

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 41/46 (89%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  40   TACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  85
            |||||||||| |||||||||||| | |||||| |||||| ||||||
Sbjct  316  TACAAGCCAGAACAAATTGATCTTTTTAACACAAGAGCAACAAAGA  361


>gb|AF022444.1|AF022444 Ceratobium mosaic potyvirus strain CerMV-6 polyprotein (NIb/CP) 
gene, partial cds
Length=1557

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 28/29 (96%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  16   CTCAATTTGGATCATTTGATAGAATACAA  44
            |||||||||||||||||||| ||||||||
Sbjct  853  CTCAATTTGGATCATTTGATTGAATACAA  881


>gb|AF022445.1|AF022445 Ceratobium mosaic potyvirus strain CerMV-18 polyprotein (NIb/CP) 
gene, partial cds
Length=1695

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 30/32 (93%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  16   CTCAATTTGGATCATTTGATAGAATACAAGCC  47
            |||||||||||||||||||| || ||||||||
Sbjct  853  CTCAATTTGGATCATTTGATTGAGTACAAGCC  884


>gb|AF022443.1|AF022443 Ceratobium mosaic potyvirus strain CerMV-1 polyprotein (NIb/CP) 
gene, partial cds
Length=1555

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 27/28 (96%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  20   ATTTGGATCATTTGATAGAATACAAGCC  47
            |||||||||||||||| |||||||||||
Sbjct  857  ATTTGGATCATTTGATTGAATACAAGCC  884


>emb|AJ580095.1| Amaranthus leaf mottle virus partial gene for polyprotein, genomic 
RNA, isolate I
Length=1777

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  15   TCTCAATTTGGATCATTTGATAGAATA  41
            ||||||||||||||||||| |||||||
Sbjct  852  TCTCAATTTGGATCATTTGTTAGAATA  878


>emb|AJ580021.1| Amaranthus leaf mottle virus partial polyprotein gene for Nib-CP 
polyprotein, genomic RNA, isolate AL
Length=1777

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  15   TCTCAATTTGGATCATTTGATAGAATA  41
            ||||||||||||||||||| |||||||
Sbjct  852  TCTCAATTTGGATCATTTGTTAGAATA  878


>gb|EU028330.1| Glycine max clone BAC gmw1-29F06 genomic sequence
Length=146570

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  72     CAGAGCATCAAAGACACAGCT  92
              |||||||||||||||||||||
Sbjct  69242  CAGAGCATCAAAGACACAGCT  69262


>gb|EU028329.1| Glycine max clone BAC gmw1-24M16 genomic sequence
Length=191410

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  72    CAGAGCATCAAAGACACAGCT  92
             |||||||||||||||||||||
Sbjct  4501  CAGAGCATCAAAGACACAGCT  4481


>emb|AM421021.1| Bean common mosaic virus partial gene for polyprotein, isolate 
I-26, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  37   GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  85
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>emb|AM421019.1| Bean common mosaic virus partial gene for polyprotein, isolate 
I-2, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  37   GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  85
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>emb|AM421018.1| Bean common mosaic virus partial gene for polyprotein, isolate 
II-21, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  37   GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  85
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>gb|DQ925424.1| Bean common mosaic virus strain Blackeye isolate BCMV-BlC-VN/YB1 
polyprotein gene, partial cds
Length=1718

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  37   GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  85
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  872  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  920


>gb|DQ898199.1| Hardenbergia mosaic virus isolate MR-21 polyprotein gene, partial 
cds
Length=834

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 26/28 (92%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  22   TTGGATCATTTGATAGAATACAAGCCAG  49
            ||||||||| | ||||||||||||||||
Sbjct  226  TTGGATCATCTCATAGAATACAAGCCAG  253


>gb|DQ898198.1| Hardenbergia mosaic virus isolate MR-13 polyprotein gene, partial 
cds
Length=834

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 26/28 (92%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  22   TTGGATCATTTGATAGAATACAAGCCAG  49
            ||||||||| | ||||||||||||||||
Sbjct  226  TTGGATCATCTCATAGAATACAAGCCAG  253


>ref|XM_001445986.1| Paramecium tetraurelia hypothetical protein (GSPATT00001667001) 
partial mRNA
Length=408

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  21  TTTGGATCATTTGATAGAAT  40
           ||||||||||||||||||||
Sbjct  79  TTTGGATCATTTGATAGAAT  98


>gb|CP000568.1| Clostridium thermocellum ATCC 27405, complete genome
Length=3843301

 Features flanking this part of subject sequence:
   81 bp at 5' side: hypothetical protein
   223 bp at 3' side: hypothetical protein

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  27       TCATTTGATAGAATACAAGC  46
                ||||||||||||||||||||
Sbjct  1369970  TCATTTGATAGAATACAAGC  1369951


>dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, contains hoxAb
Length=240727

 Features flanking this part of subject sequence:
   96037 bp at 3' side: hoxA13b

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  67     AACACCAGAGCATCAAAGACACAG  90
              |||| |||||||||||||||||||
Sbjct  87744  AACAGCAGAGCATCAAAGACACAG  87721


>gb|AF022446.1|AF022446 Ceratobium mosaic potyvirus strain CerMV-19 polyprotein (NIb/CP) 
gene, partial cds
Length=1685

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  16   CTCAATTTGGATCATTTGATAGAATACAAGCC  47
            ||||| |||||||||||||| || ||||||||
Sbjct  853  CTCAACTTGGATCATTTGATTGAGTACAAGCC  884


>gb|AF022442.1|AF022442 Ceratobium mosaic potyvirus strain CerMV-13 polyprotein (NIb/CP) 
gene, partial cds
Length=1720

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  16   CTCAATTTGGATCATTTGATAGAATACAAGCC  47
            ||||||||||||||||| || || ||||||||
Sbjct  853  CTCAATTTGGATCATTTAATTGAGTACAAGCC  884



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2102978
Number of extensions: 114011
Number of successful extensions: 31645
Number of sequences better than 10: 11
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 31645
Number of HSP's successfully gapped: 11
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY2122WY01R


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|232-330
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   157    9e-36
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   151    6e-34
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   151    6e-34
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   151    6e-34
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   149    2e-33
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   149    2e-33
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   149    2e-33
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   149    2e-33
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   149    2e-33
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   133    1e-28
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   133    1e-28
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   133    1e-28
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   127    8e-27
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   127    8e-27
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   127    8e-27
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   127    8e-27
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   127    8e-27
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   127    8e-27
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   121    5e-25
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   117    8e-24
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   101    5e-19
gb|EF547367.1|  South African passiflora virus polyprotein gen...  79.8    2e-12
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  75.8    3e-11
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  75.8    3e-11
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  73.8    1e-10
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  73.8    1e-10
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  58.0    6e-06
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  56.0    3e-05
gb|AF328755.1|AF328755  Bean common mosaic virus isolate Guana...  52.0    4e-04
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  52.0    4e-04
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  50.1    0.002
gb|EU028330.1|  Glycine max clone BAC gmw1-29F06 genomic sequence  42.1    0.38 
gb|EU028329.1|  Glycine max clone BAC gmw1-24M16 genomic sequence  42.1    0.38 
emb|AM421021.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
emb|AM421019.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
emb|AM421018.1|  Bean common mosaic virus partial gene for pol...  42.1    0.38 
gb|DQ925424.1|  Bean common mosaic virus strain Blackeye isola...  42.1    0.38 
dbj|AB232919.1|  Oryzias latipes hox gene cluster, complete cd...  40.1    1.5  
emb|CR848841.19|  Zebrafish DNA sequence from clone DKEY-202I1...  38.2    5.9  
gb|AC171908.2|  Capitella capitata clone JGIBGZA-9F8, complete...  38.2    5.9  
emb|AL158153.10|  Human DNA sequence from clone RP11-373A9 on ...  38.2    5.9  
emb|AL138776.10|  Human DNA sequence from clone RP11-20H6 on c...  38.2    5.9  
gb|AC159380.8|  Mus musculus 10 BAC RP24-460M18 (Roswell Park ...  38.2    5.9  
emb|CR545467.4|  Zebrafish DNA sequence from clone CH211-196P1...  38.2    5.9  
gb|AC115029.12|  Mus musculus chromosome 3, clone RP24-248I17,...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  232  ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  292  AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  330


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct  232  ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCGTCAAAGACACAACTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct  292  AGTAAATGGTTTGAGGCCATCAAAGAAGAATATGAGTTG  330


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 88/92 (95%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||
Sbjct  232  ATAGAATACAAGCCAGCACAGATCGATCTATATAACACCAGAGCATCAAGGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATA  92
            |||||||||||||||||||| |||||||||||
Sbjct  292  AGTAAATGGTTTGAGGCCATCAAAGGAGAATA  323


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 88/92 (95%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||
Sbjct  235  ATAGAATACAAGCCAGCACAGATCGATCTATATAACACCAGAGCATCAAGGACACAGCTC  294

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATA  92
            |||||||||||||||||||| |||||||||||
Sbjct  295  AGTAAATGGTTTGAGGCCATCAAAGGAGAATA  326


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 88/92 (95%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||
Sbjct  235  ATAGAATACAAGCCAGCACAGATCGATCTATATAACACCAGAGCATCAAGGACACAGCTC  294

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATA  92
            |||||||||||||||||||| |||||||||||
Sbjct  295  AGTAAATGGTTTGAGGCCATCAAAGGAGAATA  326


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 90/95 (94%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct  692  ATAGAGTACAAGCCAGCACAAATTGACCTATACAACACCAGAGCATCAAAGACACAGCTC  751

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGA  95
            |  ||||||||||||||||||||||||||||||||
Sbjct  752  AACAAATGGTTTGAGGCCATTAAAGGAGAATACGA  786


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  232  ATAGAATATAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACGCAACTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            |||||||||||||| ||||| ||||||||||| ||||||
Sbjct  292  AGTAAATGGTTTGAAGCCATCAAAGGAGAATATGAGTTG  330


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct  260  ATAGAATACAAACCAGCACAAATTGATCTATACAACACCAGAGCTTCAAAGACACAACTC  319

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            || ||||||||||||||||| ||||||||||||||||||
Sbjct  320  AGCAAATGGTTTGAGGCCATCAAAGGAGAATACGAGTTG  358


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct  235  ATAGAATACAAACCAGCACAAATTGATCTATACAACACCAGAGCTTCAAAGACACAACTC  294

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            || ||||||||||||||||| ||||||||||||||||||
Sbjct  295  AGCAAATGGTTTGAGGCCATCAAAGGAGAATACGAGTTG  333


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct  260  ATAGAATACAAACCAGCACAAATTGATCTATACAACACCAGAGCTTCAAAGACACAACTC  319

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            || ||||||||||||||||| ||||||||||||||||||
Sbjct  320  AGCAAATGGTTTGAGGCCATCAAAGGAGAATACGAGTTG  358


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAGTACAAGCCAGCACAAATTGACCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGA  95
            |  ||||||||||||||||||||||  ||||||||
Sbjct  292  AACAAATGGTTTGAGGCCATTAAAGAGGAATACGA  326


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAGTACAAGCCAGCACAAATTGACCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGA  95
            |  ||||||||||||||||||||||  ||||||||
Sbjct  292  AACAAATGGTTTGAGGCCATTAAAGAGGAATACGA  326


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAGTACAAGCCAGCACAAATTGACCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGA  95
            |  ||||||||||||||||||||||  ||||||||
Sbjct  292  AACAAATGGTTTGAGGCCATTAAAGAGGAATACGA  326


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct  232  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCTTCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||||| ||| ||||||
Sbjct  292  AGCAAATGGTTTGAAGCCATTAAAGAAGAGTACGAG  327


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||| | ||| ||||||
Sbjct  292  AGCAAATGGTTTGAAGCCATTAAGGAAGAGTACGAG  327


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||| | ||| ||||||
Sbjct  292  AGCAAATGGTTTGAAGCCATTAAGGAAGAGTACGAG  327


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct  232  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCATCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||| | ||| ||||||
Sbjct  292  AGCAAATGGTTTGAAGCCATTAAGGAAGAGTACGAG  327


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct  232  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCTTCAAAGACACAGCTC  291

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||||| ||| ||||||
Sbjct  292  AGCAAATGGTTTGAAGCCATTAAAGAAGAGTACGAG  327


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct  244  ATAGAATATAAGCCAGCGCAAATTGATCTATACAACACCAGAGCTTCAAAGACACAGCTC  303

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAG  96
            || ||||||||||| |||||||||| ||| ||||||
Sbjct  304  AGCAAATGGTTTGAAGCCATTAAAGAAGAGTACGAG  339


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 79/85 (92%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| |||||||| |||||||| || || |||||||| ||||||||||||||||||
Sbjct  475  ATAGAATATAAGCCAGCGCAAATTGACCTGTACAACACCAGGGCATCAAAGACACAGCTC  534

Query  61   AGTAAATGGTTTGAGGCCATTAAAG  85
            |||||||||||||||||||||||||
Sbjct  535  AGTAAATGGTTTGAGGCCATTAAAG  559


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 74/79 (93%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||
Sbjct  232  ATAGAATACAAGCCAGCACAAATCGATCTATATAACACCAGGGCATCAAAGACGCAACTC  291

Query  61   AGTAAATGGTTTGAGGCCA  79
            || ||||||||||||||||
Sbjct  292  AGCAAATGGTTTGAGGCCA  310


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 87/99 (87%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| || |||||| | |||||||| || ||||||||||| ||||| ||||||||||||
Sbjct  859  ATAGACTATAAGCCATCGCAAATTGACCTGTATAACACCAGGGCATCTAAGACACAGCTC  918

Query  61   AGTAAATGGTTTGAGGCCATTAAAGGAGAATACGAGTTG  99
            |||||||||||||||||||| ||||  || |||||||||
Sbjct  919  AGTAAATGGTTTGAGGCCATCAAAGAGGAGTACGAGTTG  957


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 70/80 (87%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| || ||||||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct  844  ATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACACAGCTC  903

Query  61   AGTAAATGGTTTGAGGCCAT  80
            |  || |||||||| |||||
Sbjct  904  AACAAGTGGTTTGAAGCCAT  923


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 68/78 (87%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  1     ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
             |||||||| ||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct  8641  ATAGAATATAAGCCAAAACAGATTGATCTGTATAACACCAGAGCATCAAAGGCACAGTTC  8700

Query  61    AGTAAATGGTTTGAGGCC  78
             |  | |||||||||||||
Sbjct  8701  AACACATGGTTTGAGGCC  8718


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 68/78 (87%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            |||||||| ||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||
Sbjct  397  ATAGAATATAAGCCAAAACAGATTGATCTGTATAACACCAGAGCATCAAAGGCACAGTTC  456

Query  61   AGTAAATGGTTTGAGGCC  78
            |  | |||||||||||||
Sbjct  457  AACACATGGTTTGAGGCC  474


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 73/85 (85%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| || ||||||||||| ||||| || || |||||||||||||||||||||||| ||
Sbjct  583  ATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACACAGTTC  642

Query  61   AGTAAATGGTTTGAGGCCATTAAAG  85
            |  || |||||||| ||||| ||||
Sbjct  643  AACAAGTGGTTTGAAGCCATCAAAG  667


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 73/85 (85%), Gaps = 0/85 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| || ||||||||||| ||||| || || |||||||||||||||||||||||| ||
Sbjct  583  ATAGAGTATAAGCCAGCACAGATTGACCTGTACAACACCAGAGCATCAAAGACACAGTTC  642

Query  61   AGTAAATGGTTTGAGGCCATTAAAG  85
            |  || |||||||| ||||| ||||
Sbjct  643  AACAAGTGGTTTGAAGCCATCAAAG  667


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 44/49 (89%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAA  49
            ||||| ||||| ||||| |||||||||||||| ||||| ||||||||||
Sbjct  424  ATAGAGTACAAACCAGCGCAAATTGATCTATACAACACTAGAGCATCAA  472


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 56.0 bits (28),  Expect = 3e-05
 Identities = 40/44 (90%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  7    TACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAA  50
            ||||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct  283  TACAAACCAGCACAAATTGATCTGTATAACACAAGAGCCTCAAA  326


>gb|AF328755.1|AF328755 Bean common mosaic virus isolate Guanajuato polyprotein mRNA, 
partial cds
Length=858

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 41/46 (89%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  7    TACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  52
            |||||||||| |||||||||||| | |||||| |||||| ||||||
Sbjct  316  TACAAGCCAGAACAAATTGATCTTTTTAACACAAGAGCAACAAAGA  361


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 65/78 (83%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGACACAGCTC  60
            ||||| |||||||||  ||| |||||  | ||||||||||||||||||||| ||||| | 
Sbjct  472  ATAGAGTACAAGCCAAAACAGATTGACTTGTATAACACCAGAGCATCAAAGGCACAGTTT  531

Query  61   AGTAAATGGTTTGAGGCC  78
            |  | |||||||||||||
Sbjct  532  AACACATGGTTTGAGGCC  549


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 43/49 (87%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  1    ATAGAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAA  49
            ||||| || |||||||| |||||||| ||||| ||||||||||| ||||
Sbjct  331  ATAGAGTATAAGCCAGCGCAAATTGACCTATACAACACCAGAGCCTCAA  379


>gb|EU028330.1| Glycine max clone BAC gmw1-29F06 genomic sequence
Length=146570

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  39     CAGAGCATCAAAGACACAGCT  59
              |||||||||||||||||||||
Sbjct  69242  CAGAGCATCAAAGACACAGCT  69262


>gb|EU028329.1| Glycine max clone BAC gmw1-24M16 genomic sequence
Length=191410

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  39    CAGAGCATCAAAGACACAGCT  59
             |||||||||||||||||||||
Sbjct  4501  CAGAGCATCAAAGACACAGCT  4481


>emb|AM421021.1| Bean common mosaic virus partial gene for polyprotein, isolate 
I-26, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  4    GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  52
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>emb|AM421019.1| Bean common mosaic virus partial gene for polyprotein, isolate 
I-2, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  4    GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  52
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>emb|AM421018.1| Bean common mosaic virus partial gene for polyprotein, isolate 
II-21, genomic RNA
Length=613

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  4    GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  52
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  389  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  437


>gb|DQ925424.1| Bean common mosaic virus strain Blackeye isolate BCMV-BlC-VN/YB1 
polyprotein gene, partial cds
Length=1718

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 42/49 (85%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  4    GAATACAAGCCAGCACAAATTGATCTATATAACACCAGAGCATCAAAGA  52
            ||||||||||||| ||||| |||||| |  ||||| |||||| ||||||
Sbjct  872  GAATACAAGCCAGAACAAACTGATCTTTTCAACACAAGAGCAACAAAGA  920


>dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, contains hoxAb
Length=240727

 Features flanking this part of subject sequence:
   96037 bp at 3' side: hoxA13b

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  34     AACACCAGAGCATCAAAGACACAG  57
              |||| |||||||||||||||||||
Sbjct  87744  AACAGCAGAGCATCAAAGACACAG  87721


>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 
16, complete sequence
Length=205755

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  17     CACAAATTGATCTATATAA  35
              |||||||||||||||||||
Sbjct  79901  CACAAATTGATCTATATAA  79883


>gb|AC171908.2| Capitella capitata clone JGIBGZA-9F8, complete sequence
Length=41023

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  73    GAGGCCATTAAAGGAGAAT  91
             |||||||||||||||||||
Sbjct  4709  GAGGCCATTAAAGGAGAAT  4691


>emb|AL158153.10| Human DNA sequence from clone RP11-373A9 on chromosome 9q13-21.2 
Contains a ribosomal protein L30 (RPL30) pseudogene and 
the 3' end of a novel gene (MGC21981), complete sequence
Length=45111

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  44     CATCAAAGACACAGCTCAG  62
              |||||||||||||||||||
Sbjct  36003  CATCAAAGACACAGCTCAG  35985


>emb|AL138776.10| Human DNA sequence from clone RP11-20H6 on chromosome 1q25.1-31.1 
Contains the 3' end of the RGSL1 gene for regulator of 
G-protein signalling like 1, the RNASEL gene for ribonuclease 
L (2',5'-oligoisoadenylate synthetase-dependent) and a CpG 
island, complete sequence
Length=100549

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  33     TAACACCAGAGCATCAAAG  51
              |||||||||||||||||||
Sbjct  18783  TAACACCAGAGCATCAAAG  18765


>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute 
(C57BL/6J Male) Mouse BAC Library) complete sequence
Length=196877

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  54     ACAGCTCAGTAAATGGTTT  72
              |||||||||||||||||||
Sbjct  85474  ACAGCTCAGTAAATGGTTT  85456


>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 
16, complete sequence
Length=161708

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  17     CACAAATTGATCTATATAA  35
              |||||||||||||||||||
Sbjct  40712  CACAAATTGATCTATATAA  40694


>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence
Length=171133

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  13      CCAGCACAAATTGATCTAT  31
               |||||||||||||||||||
Sbjct  100409  CCAGCACAAATTGATCTAT  100391



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2424574
Number of extensions: 135586
Number of successful extensions: 32457
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 32457
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller,0and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY4CADF01R


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|265-363
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   157    9e-36
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   157    9e-36
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   149    2e-33
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   149    2e-33
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   149    2e-33
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   141    5e-31
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   141    5e-31
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   141    5e-31
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   139    2e-30
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   133    1e-28
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   133    1e-28
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   131    5e-28
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   125    3e-26
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   125    3e-26
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   123    1e-25
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   119    2e-24
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   119    2e-24
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   117    8e-24
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   115    3e-23
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   115    3e-23
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   115    3e-23
gb|EF547367.1|  South African passiflora virus polyprotein gen...  61.9    4e-07
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  61.9    4e-07
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  61.9    4e-07
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  50.1    0.002
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  50.1    0.002
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  44.1    0.095
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  44.1    0.095
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  44.1    0.095
gb|EU028330.1|  Glycine max clone BAC gmw1-29F06 genomic sequence  42.1    0.38 
gb|EU028329.1|  Glycine max clone BAC gmw1-24M16 genomic sequence  42.1    0.38 
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  42.1    0.38 
dbj|AB232919.1|  Oryzias latipes hox gene cluster, complete cd...  40.1    1.5  
emb|AM456191.2|  Vitis vinifera contig VV78X254203.6, whole ge...  38.2    5.9  
emb|AM454422.2|  Vitis vinifera contig VV78X061798.62, whole g...  38.2    5.9  
gb|AC171908.2|  Capitella capitata clone JGIBGZA-9F8, complete...  38.2    5.9  
emb|AL158153.10|  Human DNA sequence from clone RP11-373A9 on ...  38.2    5.9  
gb|AC159380.8|  Mus musculus 10 BAC RP24-460M18 (Roswell Park ...  38.2    5.9  
ref|XM_960735.1|  Neurospora crassa OR74A chromosome I             38.2    5.9  
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  325  GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  363


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct  293  AACACCAGAGCTTCAAAGACACAACTCAGCAAATGGTTTGAGGCCATCAAAGGAGAATAC  352

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  353  GAGTTGGACGATGACAAGATGGGTGTTATCATGAATGGG  391


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct  268  AACACCAGAGCTTCAAAGACACAACTCAGCAAATGGTTTGAGGCCATCAAAGGAGAATAC  327

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  328  GAGTTGGACGATGACAAGATGGGTGTTATCATGAATGGG  366


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||| 
Sbjct  265  AACACCAGAGCGTCAAAGACACAACTCAGTAAATGGTTTGAGGCCATCAAAGAAGAATAT  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  325  GAGTTGGACGATGAAAAGATGGGTGTTATCATGAATGGG  363


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| 
Sbjct  265  AACACCAGAGCATCAAAGACGCAACTCAGTAAATGGTTTGAAGCCATCAAAGGAGAATAT  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  325  GAGTTGGACGATGACAAGATGGGTGTTATCATGAATGGG  363


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct  293  AACACCAGAGCTTCAAAGACACAACTCAGCAAATGGTTTGAGGCCATCAAAGGAGAATAC  352

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| |||||||||| |||||||||||||
Sbjct  353  GAGTTGGACGATGACAAGATGGGTGGTATCATGAATGGG  391


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  265  AACACCAGAGCATCAAGGACACAGCTCAGTAAATGGTTTGAGGCCATCAAAGGAGAATAT  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||  |||||||||| || |||||||||||||||||||||
Sbjct  325  GAACTGGACGATGACAAAATGGGTGTTATCATGAATGGG  363


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  268  AACACCAGAGCATCAAGGACACAGCTCAGTAAATGGTTTGAGGCCATCAAAGGAGAATAT  327

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||  |||||||||| || |||||||||||||||||||||
Sbjct  328  GAACTGGACGATGACAAAATGGGTGTTATCATGAATGGG  366


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  268  AACACCAGAGCATCAAGGACACAGCTCAGTAAATGGTTTGAGGCCATCAAAGGAGAATAT  327

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||  |||||||||| || |||||||||||||||||||||
Sbjct  328  GAACTGGACGATGACAAAATGGGTGTTATCATGAATGGG  366


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 91/98 (92%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct  725  AACACCAGAGCATCAAAGACACAGCTCAACAAATGGTTTGAGGCCATTAAAGGAGAATAC  784

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||  |||| ||||| |||||||||||| ||||||||||
Sbjct  785  GATCTGGATGATGACAAGATGGGTGTTGTCATGAATGG  822


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||
Sbjct  265  AACACCAGAGCTTCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAAGAAGAGTAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||| ||||||| || ||||||||||||||||||||||||
Sbjct  325  GAGCTGGACGAAGACAAGATGGGTGTTATCATGAATGGG  363


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||
Sbjct  277  AACACCAGAGCTTCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAAGAAGAGTAC  336

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||| ||||||| || ||||||||||||||||||||||||
Sbjct  337  GAGCTGGACGAAGACAAGATGGGTGTTATCATGAATGGG  375


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  131 bits (66),  Expect = 5e-28
 Identities = 90/98 (91%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||  || |||
Sbjct  508  AACACCAGGGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGAGGAGTAC  567

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||| |||| ||||| |||||||||||||| ||||||||
Sbjct  568  GAGCTGGATGATGACAAGATGGGTGTTATAATGAATGG  605


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| |||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAGGAAGAGTAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||| |||| || || ||||||||||||||||||||||||
Sbjct  325  GAGCTGGATGAAGACAAGATGGGTGTTATCATGAATGGG  363


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| |||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAGGAAGAGTAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            ||| |||| || || ||||||||||||||||||||||||
Sbjct  325  GAGCTGGATGAAGACAAGATGGGTGTTATCATGAATGGG  363


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 89/98 (90%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||| ||||| |||||||||||||||||||||||||||||||| ||||  || |||
Sbjct  892  AACACCAGGGCATCTAAGACACAGCTCAGTAAATGGTTTGAGGCCATCAAAGAGGAGTAC  951

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            |||||||| ||||| |||||||||||||| ||||||||
Sbjct  952  GAGTTGGATGATGACAAGATGGGTGTTATAATGAATGG  989


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 87/96 (90%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||
Sbjct  265  AACACCAGAGCTTCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAAGAAGAGTAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAAT  96
            ||| |||| || || |||||||||||||||||||||
Sbjct  325  GAGCTGGATGAAGACAAGATGGGTGTTATCATGAAT  360


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 87/96 (90%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| |||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAGCAAATGGTTTGAAGCCATTAAGGAAGAGTAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAAT  96
            ||| |||| || || |||||||||||||||||||||
Sbjct  325  GAGCTGGATGAAGACAAGATGGGTGTTATCATGAAT  360


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||| ||||||||||| || ||||| ||||||||||||||||    |||||||| |
Sbjct  265  AACACCAGGGCATCAAAGACGCAACTCAGCAAATGGTTTGAGGCCACCTCAGGAGAATCC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGG  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  325  GAGTTGGACGATGACAAGATGGGTGTTATCATGAATGGG  363


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 88/98 (89%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAACAAATGGTTTGAGGCCATTAAAGAGGAATAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||  |||| ||||| |||||||||||| | ||||||||
Sbjct  325  GATCTGGATGATGACAAGATGGGTGTTGTAATGAATGG  362


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 88/98 (89%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAACAAATGGTTTGAGGCCATTAAAGAGGAATAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||  |||| ||||| |||||||||||| | ||||||||
Sbjct  325  GATCTGGATGATGACAAGATGGGTGTTGTAATGAATGG  362


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 88/98 (89%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||||||
Sbjct  265  AACACCAGAGCATCAAAGACACAGCTCAACAAATGGTTTGAGGCCATTAAAGAGGAATAC  324

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||  |||| ||||| |||||||||||| | ||||||||
Sbjct  325  GATCTGGATGATGACAAGATGGGTGTTGTAATGAATGG  362


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 43/47 (91%), Gaps = 0/47 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCAT  47
            ||||||||||||||||||||||||||||  || |||||||| |||||
Sbjct  877  AACACCAGAGCATCAAAGACACAGCTCAACAAGTGGTTTGAAGCCAT  923


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 70/83 (84%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||||||||||| |||  || |||||||| ||||| ||||  || || 
Sbjct  616  AACACCAGAGCATCAAAGACACAGTTCAACAAGTGGTTTGAAGCCATCAAAGAGGAGTAT  675

Query  61   GAGTTGGACGATGATAAGATGGG  83
            || ||||| ||||| ||||||||
Sbjct  676  GAATTGGATGATGACAAGATGGG  698


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 70/83 (84%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCCATTAAAGGAGAATAC  60
            |||||||||||||||||||||||| |||  || |||||||| ||||| ||||  || || 
Sbjct  616  AACACCAGAGCATCAAAGACACAGTTCAACAAGTGGTTTGAAGCCATCAAAGAGGAGTAT  675

Query  61   GAGTTGGACGATGATAAGATGGG  83
            || ||||| ||||| ||||||||
Sbjct  676  GAATTGGATGATGACAAGATGGG  698


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 40/45 (88%), Gaps = 0/45 (0%)
 Strand=Plus/Plus

Query  1     AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCC  45
             |||||||||||||||||| ||||| |||  | |||||||||||||
Sbjct  8674  AACACCAGAGCATCAAAGGCACAGTTCAACACATGGTTTGAGGCC  8718


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 40/45 (88%), Gaps = 0/45 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCC  45
            |||||||||||||||||| ||||| |||  | |||||||||||||
Sbjct  430  AACACCAGAGCATCAAAGGCACAGTTCAACACATGGTTTGAGGCC  474


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73   GATAAGATGGGTGTTATCATGAATGG  98
            |||||||||| |||||||||||||||
Sbjct  412  GATAAGATGGCTGTTATCATGAATGG  437


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 34/38 (89%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  61   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGG  98
            ||||| |||||||| ||||||  |||||||||||||||
Sbjct  517  GAGTTAGACGATGACAAGATGTCTGTTATCATGAATGG  554


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73   GATAAGATGGGTGTTATCATGAATGG  98
            |||||||||| |||||||||||||||
Sbjct  400  GATAAGATGGCTGTTATCATGAATGG  425


>gb|EU028330.1| Glycine max clone BAC gmw1-29F06 genomic sequence
Length=146570

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  6      CAGAGCATCAAAGACACAGCT  26
              |||||||||||||||||||||
Sbjct  69242  CAGAGCATCAAAGACACAGCT  69262


>gb|EU028329.1| Glycine max clone BAC gmw1-24M16 genomic sequence
Length=191410

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  6     CAGAGCATCAAAGACACAGCT  26
             |||||||||||||||||||||
Sbjct  4501  CAGAGCATCAAAGACACAGCT  4481


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 39/45 (86%), Gaps = 0/45 (0%)
 Strand=Plus/Plus

Query  1    AACACCAGAGCATCAAAGACACAGCTCAGTAAATGGTTTGAGGCC  45
            |||||||||||||||||| ||||| | |  | |||||||||||||
Sbjct  505  AACACCAGAGCATCAAAGGCACAGTTTAACACATGGTTTGAGGCC  549


>dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, contains hoxAb
Length=240727

 Features flanking this part of subject sequence:
   96037 bp at 3' side: hoxA13b

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  1      AACACCAGAGCATCAAAGACACAG  24
              |||| |||||||||||||||||||
Sbjct  87744  AACAGCAGAGCATCAAAGACACAG  87721


>emb|AM456191.2| Vitis vinifera contig VV78X254203.6, whole genome shotgun sequence
Length=6271

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  71    ATGATAAGATGGGTGTTAT  89
             |||||||||||||||||||
Sbjct  1603  ATGATAAGATGGGTGTTAT  1585


>emb|AM454422.2| Vitis vinifera contig VV78X061798.62, whole genome shotgun sequence
Length=5446

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  71    ATGATAAGATGGGTGTTAT  89
             |||||||||||||||||||
Sbjct  4208  ATGATAAGATGGGTGTTAT  4226


>gb|AC171908.2| Capitella capitata clone JGIBGZA-9F8, complete sequence
Length=41023

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  40    GAGGCCATTAAAGGAGAAT  58
             |||||||||||||||||||
Sbjct  4709  GAGGCCATTAAAGGAGAAT  4691


>emb|AL158153.10| Human DNA sequence from clone RP11-373A9 on chromosome 9q13-21.2 
Contains a ribosomal protein L30 (RPL30) pseudogene and 
the 3' end of a novel gene (MGC21981), complete sequence
Length=45111

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  11     CATCAAAGACACAGCTCAG  29
              |||||||||||||||||||
Sbjct  36003  CATCAAAGACACAGCTCAG  35985


>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute 
(C57BL/6J Male) Mouse BAC Library) complete sequence
Length=196877

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  21     ACAGCTCAGTAAATGGTTT  39
              |||||||||||||||||||
Sbjct  85474  ACAGCTCAGTAAATGGTTT  85456


>ref|XM_960735.1| Neurospora crassa OR74A chromosome I
Length=1638

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  76    AAGATGGGTGTTATCATGA  94
             |||||||||||||||||||
Sbjct  1167  AAGATGGGTGTTATCATGA  1149


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  76   AAGATGGGTGTTATCATGAATGG  98
            ||||||| |||||||||||||||
Sbjct  439  AAGATGGCTGTTATCATGAATGG  461



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711   0 1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2201626
Number of extensions: 127170
Number of successful extensions: 35426
Number of sequences better than 10: 2
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 35426
Number of HSP's successfully gapped: 2
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY4GHBMH01R


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|298-396
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   172    2e-40
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   172    2e-40
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   165    4e-38
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   165    4e-38
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   149    2e-33
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   149    2e-33
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   149    2e-33
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   149    2e-33
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   149    2e-33
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   141    5e-31
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   141    5e-31
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   133    1e-28
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   133    1e-28
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   133    1e-28
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   125    3e-26
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   125    3e-26
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   117    8e-24
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   117    8e-24
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   117    8e-24
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   117    8e-24
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  79.8    2e-12
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  77.8    7e-12
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  77.8    7e-12
gb|EF547367.1|  South African passiflora virus polyprotein gen...  73.8    1e-10
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  73.8    1e-10
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  73.8    1e-10
dbj|AB063251.1|  Zucchini yellow mosaic virus CP gene for coat...  73.8    1e-10
gb|AY611021.1|  Zucchini yellow mosaic virus isolate CH99/116 ...  71.9    4e-10
dbj|AB188116.1|  Zucchini yellow mosaic virus genomic RNA, com...  71.9    4e-10
dbj|AB188115.1|  Zucchini yellow mosaic virus genomic RNA, com...  71.9    4e-10
gb|DQ098904.1|  Eustrephus virus Y polyprotein gene, partial cds   71.9    4e-10
gb|AF513551.1|  Zucchini yellow mosaic virus isolate ningbo co...  71.9    4e-10
gb|AF513550.1|  Zucchini yellow mosaic virus isolate shangyu c...  71.9    4e-10
gb|AY074810.1|  Zucchini yellow mosaic virus isolate Ningbo co...  71.9    4e-10
gb|AY074809.1|  Zucchini yellow mosaic virus isolate Beijing c...  71.9    4e-10
emb|AJ420020.1|ZYE420020  Zucchini yellow mosaic virus genomic...  71.9    4e-10
dbj|D00692.1|ZYMV  Zucchini yellow mosaic virus gene for polyp...  71.9    4e-10
emb|AM422386.1|  Zucchini yellow mosaic virus gene for polypro...  69.9    2e-09
gb|AY611026.1|  Zucchini yellow mosaic virus isolate HN-01 fro...  69.9    2e-09
gb|AF127929.2|AF127929  Zucchini yellow mosaic virus isolate T...  69.9    2e-09
gb|AF435425.1|AF435425  Zucchini yellow mosaic virus coat prot...  69.9    2e-09
emb|AJ429071.1|ZYE429071  Zucchini yellow mosaic virus polypro...  69.9    2e-09
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  69.9    2e-09
gb|AF127934.1|AF127934  Zucchini yellow mosaic virus isolate T...  69.9    2e-09
gb|AF127932.1|AF127932  Zucchini yellow mosaic virus isolate T...  69.9    2e-09
gb|AF127931.1|AF127931  Zucchini yellow mosaic virus isolate T...  69.9    2e-09
gb|AF127930.1|AF127930  Zucchini yellow mosaic virus isolate T...  69.9    2e-09
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  69.9    2e-09
dbj|AB004640.1|  Zucchini yellow mosaic virus genomic RNA for ...  69.9    2e-09
gb|AY166867.1|  Potato virus Y strain N isolate N-Jg, complete...  67.9    7e-09
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  67.9    7e-09
gb|DQ978272.1|  Zucchini yellow mosaic virus isolate ZYMV-KZN ...  65.9    3e-08
gb|DQ124239.1|  Zucchini yellow mosaic virus isolate Kuchyna, ...  65.9    3e-08
gb|AY611024.1|  Zucchini yellow mosaic virus isolate China 99/...  65.9    3e-08
gb|AY611022.1|  Zucchini yellow mosaic virus isolate CH99/87 p...  65.9    3e-08
gb|AY188994.1|  Zucchini yellow mosaic virus strain B*, comple...  65.9    3e-08
gb|AF527879.1|  Chickpea yellow mosaic virus putative coat pro...  65.9    3e-08
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  65.9    3e-08
emb|AJ251527.1|ZYE251527  Zucchini yellow mosaic virus gene fo...  65.9    3e-08
emb|AJ459956.1|ZYE459956  Zucchini yellow mosaic virus partial...  65.9    3e-08
emb|AJ459955.1|ZYE459955  Zucchini yellow mosaic virus partial...  65.9    3e-08
emb|AJ459954.1|ZYE459954  Zucchini yellow mosaic virus partial...  65.9    3e-08
emb|AJ316228.2|ZYE316228  Zucchini yellow mosaic virus gene fo...  65.9    3e-08
dbj|AB127936.1|  Zucchini yellow mosaic virus gene for polypro...  65.9    3e-08
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  65.9    3e-08
gb|AF200563.1|AF200561S3  Soybean mosaic virus G3 coat protein...  65.9    3e-08
dbj|AB100444.1|  Soybean mosaic virus gene for coat protein, p...  65.9    3e-08
emb|AJ316227.1|ZYE316227  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420019.1|ZYE420019  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420018.1|ZYE420018  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420017.1|ZYE420017  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420016.1|ZYE420016  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420015.1|ZYE420015  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420014.1|ZYE420014  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420013.1|ZYE420013  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ420012.1|ZYE420012  Zucchini yellow mosaic virus genomic...  65.9    3e-08
dbj|AB004641.1|  Zucchini yellow mosaic virus genomic RNA for ...  65.9    3e-08
dbj|AB085900.1|  Soybean mosaic virus CP gene for coat protein...  65.9    3e-08
gb|EU371650.1|  Zucchini yellow mosaic virus isolate H8 polypr...  63.9    1e-07
gb|EU371649.1|  Zucchini yellow mosaic virus isolate leaves po...  63.9    1e-07
gb|EU371648.1|  Zucchini yellow mosaic virus isolate L5 polypr...  63.9    1e-07
gb|EU371647.1|  Zucchini yellow mosaic virus isolate J7228 pol...  63.9    1e-07
gb|EU371646.1|  Zucchini yellow mosaic virus isolate G6228 pol...  63.9    1e-07
gb|EU371645.1|  Zucchini yellow mosaic virus isolate J787 poly...  63.9    1e-07
gb|DQ851493.1|  Telosma mosaic virus isolate Hanoi, complete g...  63.9    1e-07
gb|AF548501.1|  Yam mild mosaic virus isolate Guad 2 polyprote...  63.9    1e-07
gb|AF548500.1|  Yam mild mosaic virus isolate Guad 1 polyprote...  63.9    1e-07
gb|AF548493.1|  Yam mild mosaic virus isolate Mart 1 polyprote...  63.9    1e-07
gb|DQ098900.1|  Siratro 1 virus Y polyprotein gene, partial cds    63.9    1e-07
gb|DQ333806.1|  Zucchini yellow mosaic virus polyprotein-like ...  63.9    1e-07
gb|L31350.1|ZYMPROPOLR  Zucchini yellow mosaic virus polyprote...  63.9    1e-07
gb|EU430294.1|  Narcissus yellow stripe virus clone NYSV-zhang...  61.9    4e-07
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  61.9    4e-07
dbj|AB369279.1|  Zucchini yellow mosaic virus genomic RNA, com...  61.9    4e-07
emb|AM158908.1|  Narcissus yellow stripe virus 1 gene for poly...  61.9    4e-07
gb|AY597207.1|  Zucchini yellow mosaic virus isolate Hefei coa...  61.9    4e-07
gb|AY611023.1|  Zucchini yellow mosaic virus isolate CH99/193 ...  61.9    4e-07
emb|AJ628756.1|  Dasheen mosaic virus partial polyprotein gene...  61.9    4e-07

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  298  TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 93/95 (97%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  326  TGGTTTGAGGCCATCAAAGGAGAATACGAGTTGGACGATGACAAGATGGGTGTTATCATG  385

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  95
            |||||||||||||||||||||||||||||||||||
Sbjct  386  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  420


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 93/95 (97%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  301  TGGTTTGAGGCCATCAAAGGAGAATACGAGTTGGACGATGACAAGATGGGTGTTATCATG  360

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  95
            |||||||||||||||||||||||||||||||||||
Sbjct  361  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  395


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct  298  TGGTTTGAGGCCATCAAAGAAGAATATGAGTTGGACGATGAAAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATCAAAGGAGAATATGAGTTGGACGATGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 92/95 (96%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||
Sbjct  326  TGGTTTGAGGCCATCAAAGGAGAATACGAGTTGGACGATGACAAGATGGGTGGTATCATG  385

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  95
            |||||||||||||||||||||||||||||||||||
Sbjct  386  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  420


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||||| ||| |||||| ||||||| || ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATTAAAGAAGAGTACGAGCTGGACGAAGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| ||||||||||| ||  |||||||||| || |||||||||||||||
Sbjct  298  TGGTTTGAGGCCATCAAAGGAGAATATGAACTGGACGATGACAAAATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||||| ||| |||||| ||||||| || ||||||||||||||||||
Sbjct  310  TGGTTTGAAGCCATTAAAGAAGAGTACGAGCTGGACGAAGACAAGATGGGTGTTATCATG  369

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  370  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  408


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| ||||||||||| ||  |||||||||| || |||||||||||||||
Sbjct  301  TGGTTTGAGGCCATCAAAGGAGAATATGAACTGGACGATGACAAAATGGGTGTTATCATG  360

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  361  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  399


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||| ||||||||||| ||  |||||||||| || |||||||||||||||
Sbjct  301  TGGTTTGAGGCCATCAAAGGAGAATATGAACTGGACGATGACAAAATGGGTGTTATCATG  360

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  361  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  399


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||||||||||||||||||  |||| ||||| |||||||||||| |||||
Sbjct  758  TGGTTTGAGGCCATTAAAGGAGAATACGATCTGGATGATGACAAGATGGGTGTTGTCATG  817

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||| |||||||||||||||||||||||||| ||||||
Sbjct  818  AATGGATTCATGGTTTGGTGCATTGAAAATGGGACTTCA  856


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||    |||||||| ||||||||||||||| ||||||||||||||||||
Sbjct  298  TGGTTTGAGGCCACCTCAGGAGAATCCGAGTTGGACGATGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTCTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||||| ||| |||||| |||| || || ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATTAAAGAAGAGTACGAGCTGGATGAAGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||| |||||||||||||||||||||||||||||||||||
Sbjct  358  AATAGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||| | ||| |||||| |||| || || ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATTAAGGAAGAGTACGAGCTGGATGAAGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||| | ||| |||||| |||| || || ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATTAAGGAAGAGTACGAGCTGGATGAAGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  358  AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| |||||||| | ||| |||||| |||| || || ||||||||||||||||||
Sbjct  298  TGGTTTGAAGCCATTAAGGAAGAGTACGAGCTGGATGAAGACAAGATGGGTGTTATCATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||| |||||||||||||||||||||||||||||||||||
Sbjct  358  AATAGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  396


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
             |||||||||||||| ||||  || ||||||||||| ||||| |||||||||||||| |||
Sbjct  925   TGGTTTGAGGCCATCAAAGAGGAGTACGAGTTGGATGATGACAAGATGGGTGTTATAATG  984

Query  61    AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
             ||||| || ||||||||||||||||||||||||||||||
Sbjct  985   AATGGATTTATGGTTTGGTGCATTGAAAATGGAACTTCA  1023


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||||||||  ||||||||  |||| ||||| |||||||||||| | |||
Sbjct  298  TGGTTTGAGGCCATTAAAGAGGAATACGATCTGGATGATGACAAGATGGGTGTTGTAATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||| |||||||||||||||||||||||||| ||||||
Sbjct  358  AATGGATTCATGGTTTGGTGCATTGAAAATGGGACTTCA  396


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||||||||  ||||||||  |||| ||||| |||||||||||| | |||
Sbjct  298  TGGTTTGAGGCCATTAAAGAGGAATACGATCTGGATGATGACAAGATGGGTGTTGTAATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||| |||||||||||||||||||||||||| ||||||
Sbjct  358  AATGGATTCATGGTTTGGTGCATTGAAAATGGGACTTCA  396


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||||||||  ||||||||  |||| ||||| |||||||||||| | |||
Sbjct  298  TGGTTTGAGGCCATTAAAGAGGAATACGATCTGGATGATGACAAGATGGGTGTTGTAATG  357

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||| |||||||||||||||||||||||||| ||||||
Sbjct  358  AATGGATTCATGGTTTGGTGCATTGAAAATGGGACTTCA  396


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||||||||||||||  || |||||| |||| ||||| |||||||||||||| |||
Sbjct  541  TGGTTTGAGGCCATTAAAGAGGAGTACGAGCTGGATGATGACAAGATGGGTGTTATAATG  600

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||| ||||||||||||||||| || ||||||||||||
Sbjct  601  AATGGTTTCATGGTTTGGTGCATCGAGAATGGAACTTCA  639


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 61/68 (89%), Gaps = 0/68 (0%)
 Strand=Plus/Plus

Query  28   GAGTTGGACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAA  87
            ||||| |||||||| ||||||  ||||||||||||||| || ||||| ||||||||||||
Sbjct  517  GAGTTAGACGATGACAAGATGTCTGTTATCATGAATGGTTTTATGGTGTGGTGCATTGAA  576

Query  88   AATGGAAC  95
            ||||||||
Sbjct  577  AATGGAAC  584


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 84/99 (84%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| ||||| ||||  || || || ||||| ||||| |||||||| || || |||
Sbjct  649  TGGTTTGAAGCCATCAAAGAGGAGTATGAATTGGATGATGACAAGATGGGAGTAATTATG  708

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            || || ||||||||||||||||| |||||||||||||||
Sbjct  709  AACGGTTTCATGGTTTGGTGCATCGAAAATGGAACTTCA  747


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 84/99 (84%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TGGTTTGAGGCCATTAAAGGAGAATACGAGTTGGACGATGATAAGATGGGTGTTATCATG  60
            |||||||| ||||| ||||  || || || ||||| ||||| |||||||| || || |||
Sbjct  649  TGGTTTGAAGCCATCAAAGAGGAGTATGAATTGGATGATGACAAGATGGGAGTAATTATG  708

Query  61   AATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            || || ||||||||||||||||| |||||||||||||||
Sbjct  709  AACGGTTTCATGGTTTGGTGCATCGAAAATGGAACTTCA  747


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 61/69 (88%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  31    TTGGACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAAT  90
             ||||| ||||| |||||||| || || ||||| || ||||||||||||||||| ||||||
Sbjct  940   TTGGATGATGACAAGATGGGAGTAATTATGAACGGTTTCATGGTTTGGTGCATCGAAAAT  999

Query  91    GGAACTTCA  99
             |||||||||
Sbjct  1000  GGAACTTCA  1008


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 49/53 (92%), Gaps = 0/53 (0%)
 Strand=Plus/Plus

Query  43   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAAC  95
            |||||| |||| || |||||||| |||||||||||||||||||||||||||||
Sbjct  580  AAGATGAGTGTAATTATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGAAC  632


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 52/57 (91%), Gaps = 0/57 (0%)
 Strand=Plus/Plus

Query  43   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||||||||||||||| || ||||| |||||||||||||| |||||||||
Sbjct  439  AAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGAACTTCA  495


>dbj|AB063251.1| Zucchini yellow mosaic virus CP gene for coat protein, partial 
cds
Length=840

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 46/49 (93%), Gaps = 0/49 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGG  92
            ||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct  353  AGATGGGTGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGG  401


>gb|AY611021.1| Zucchini yellow mosaic virus isolate CH99/116 polyprotein gene, 
partial cds
Length=1176

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  506  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  561


>dbj|AB188116.1| Zucchini yellow mosaic virus genomic RNA, complete genome, isolate:2002
Length=9593

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  8895  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  8950


>dbj|AB188115.1| Zucchini yellow mosaic virus genomic RNA, complete genome, isolate:Z5-1
Length=9593

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  8895  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  8950


>gb|DQ098904.1| Eustrephus virus Y polyprotein gene, partial cds
Length=1437

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
             ||||||| ||| |||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct  956   AGATGGGAGTTGTCATGAATGGTTTCATGGTATGGTGCATTGATAATGGAACTTCA  1011


>gb|AF513551.1| Zucchini yellow mosaic virus isolate ningbo coat protein gene, 
partial cds
Length=1053

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  408


>gb|AF513550.1| Zucchini yellow mosaic virus isolate shangyu coat protein gene, 
partial cds
Length=1053

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  408


>gb|AY074810.1| Zucchini yellow mosaic virus isolate Ningbo coat protein gene, 
partial cds
Length=1053

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  408


>gb|AY074809.1| Zucchini yellow mosaic virus isolate Beijing coat protein gene, 
partial cds
Length=1053

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  408


>emb|AJ420020.1|ZYE420020 Zucchini yellow mosaic virus genomic RNA for polyprotein gene, 
NIb protein and coat protein region, isolate Italy 1
Length=1130

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  450  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  505


>dbj|D00692.1|ZYMV Zucchini yellow mosaic virus gene for polyprotein precursor, 
partial cds
Length=1546

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 51/56 (91%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  99
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct  848  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCA  903


>emb|AM422386.1| Zucchini yellow mosaic virus gene for polyprotein, genomic RNA
Length=9591

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  8895  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  8949


>gb|AY611026.1| Zucchini yellow mosaic virus isolate HN-01 from watermelon polyprotein 
gene, partial cds
Length=1224

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  488  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  542


>gb|AF127929.2|AF127929 Zucchini yellow mosaic virus isolate TW-TN3 complete genome
Length=9591

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  8894  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  8948


>gb|AF435425.1|AF435425 Zucchini yellow mosaic virus coat protein gene, partial cds
Length=1052

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  407


>emb|AJ429071.1|ZYE429071 Zucchini yellow mosaic virus polyprotein gene, strain A, genomic 
RNA
Length=5962

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  5264  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  5318


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 53/59 (89%), Gaps = 0/59 (0%)
 Strand=Plus/Plus

Query  40   GATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            |||||||||| ||||||||||||||| || ||||| |||||||||||||| || |||||
Sbjct  412  GATAAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGGACTTC  470


>gb|AF127934.1|AF127934 Zucchini yellow mosaic virus isolate TW-PT5 polyprotein gene, 
partial cds
Length=1105

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  463


>gb|AF127932.1|AF127932 Zucchini yellow mosaic virus isolate TW-TNML1 polyprotein gene, 
partial cds
Length=1105

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  463


>gb|AF127931.1|AF127931 Zucchini yellow mosaic virus isolate TW-TC1 polyprotein gene, 
partial cds
Length=1106

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  463


>gb|AF127930.1|AF127930 Zucchini yellow mosaic virus isolate TW-CY2 polyprotein gene, 
partial cds
Length=1105

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 50/55 (90%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  44   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTC  463


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 53/59 (89%), Gaps = 0/59 (0%)
 Strand=Plus/Plus

Query  40   GATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTC  98
            |||||||||| ||||||||||||||| || ||||| |||||||||||||| || |||||
Sbjct  400  GATAAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGGACTTC  458



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 2237009
Number of extensions: 115512
Number of successful extensions: 30960
Number of sequences better than 10: 48
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 30960
Number of HSP's successfully gapped: 48
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
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	Status=READY
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--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY4RV6DE014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|331-429
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   170    6e-40
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   155    4e-35
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   155    4e-35
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   155    4e-35
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   155    4e-35
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   153    1e-34
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   153    1e-34
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   147    9e-33
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   145    4e-32
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   145    4e-32
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   141    5e-31
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   141    5e-31
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   139    2e-30
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   139    2e-30
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   139    2e-30
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   133    1e-28
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   125    3e-26
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   117    8e-24
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   117    8e-24
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   117    8e-24
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   115    3e-23
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   113    1e-22
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   109    2e-21
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   105    3e-20
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   105    3e-20
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   105    3e-20
gb|EF547367.1|  South African passiflora virus polyprotein gen...   101    5e-19
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   101    5e-19
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   101    5e-19
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  93.7    1e-16
gb|AY611021.1|  Zucchini yellow mosaic virus isolate CH99/116 ...  87.7    7e-15
gb|AF513551.1|  Zucchini yellow mosaic virus isolate ningbo co...  87.7    7e-15
gb|AF513550.1|  Zucchini yellow mosaic virus isolate shangyu c...  87.7    7e-15
gb|AY074810.1|  Zucchini yellow mosaic virus isolate Ningbo co...  87.7    7e-15
gb|AY074809.1|  Zucchini yellow mosaic virus isolate Beijing c...  87.7    7e-15
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  87.7    7e-15
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  87.7    7e-15
emb|AJ420020.1|ZYE420020  Zucchini yellow mosaic virus genomic...  81.8    4e-13
dbj|D00692.1|ZYMV  Zucchini yellow mosaic virus gene for polyp...  81.8    4e-13
emb|AM422386.1|  Zucchini yellow mosaic virus gene for polypro...  79.8    2e-12
gb|AY611026.1|  Zucchini yellow mosaic virus isolate HN-01 fro...  79.8    2e-12
gb|AF127929.2|AF127929  Zucchini yellow mosaic virus isolate T...  79.8    2e-12
gb|AF435425.1|AF435425  Zucchini yellow mosaic virus coat prot...  79.8    2e-12
emb|AJ429071.1|ZYE429071  Zucchini yellow mosaic virus polypro...  79.8    2e-12
gb|AF127934.1|AF127934  Zucchini yellow mosaic virus isolate T...  79.8    2e-12
gb|AF127932.1|AF127932  Zucchini yellow mosaic virus isolate T...  79.8    2e-12
gb|AF127931.1|AF127931  Zucchini yellow mosaic virus isolate T...  79.8    2e-12
gb|AF127930.1|AF127930  Zucchini yellow mosaic virus isolate T...  79.8    2e-12
dbj|AB004640.1|  Zucchini yellow mosaic virus genomic RNA for ...  79.8    2e-12
gb|DQ898203.1|  Hardenbergia mosaic virus isolate Sb-19-4 poly...  77.8    7e-12
gb|DQ898202.1|  Hardenbergia mosaic virus isolate Sb-19-1 poly...  77.8    7e-12
gb|AY278998.1|  Zucchini yellow mosaic virus strain KR-PA comp...  75.8    3e-11
emb|AJ316228.2|ZYE316228  Zucchini yellow mosaic virus gene fo...  75.8    3e-11
emb|AJ316227.1|ZYE316227  Zucchini yellow mosaic virus genomic...  75.8    3e-11
gb|EU371650.1|  Zucchini yellow mosaic virus isolate H8 polypr...  73.8    1e-10
gb|EU371649.1|  Zucchini yellow mosaic virus isolate leaves po...  73.8    1e-10
gb|EU371648.1|  Zucchini yellow mosaic virus isolate L5 polypr...  73.8    1e-10
gb|EU371647.1|  Zucchini yellow mosaic virus isolate J7228 pol...  73.8    1e-10
gb|EU371646.1|  Zucchini yellow mosaic virus isolate G6228 pol...  73.8    1e-10
gb|EU371645.1|  Zucchini yellow mosaic virus isolate J787 poly...  73.8    1e-10
gb|DQ978272.1|  Zucchini yellow mosaic virus isolate ZYMV-KZN ...  73.8    1e-10
gb|DQ645729.1|  Zucchini yellow mosaic virus isolate ZYMV C-16...  73.8    1e-10
dbj|AB188116.1|  Zucchini yellow mosaic virus genomic RNA, com...  73.8    1e-10
dbj|AB188115.1|  Zucchini yellow mosaic virus genomic RNA, com...  73.8    1e-10
gb|DQ098904.1|  Eustrephus virus Y polyprotein gene, partial cds   73.8    1e-10
gb|DQ098900.1|  Siratro 1 virus Y polyprotein gene, partial cds    73.8    1e-10
emb|AJ316229.2|ZYE316229  Zucchini yellow mosaic virus gene fo...  73.8    1e-10
gb|DQ333806.1|  Zucchini yellow mosaic virus polyprotein-like ...  73.8    1e-10
gb|L31350.1|ZYMPROPOLR  Zucchini yellow mosaic virus polyprote...  73.8    1e-10
dbj|AB063251.1|  Zucchini yellow mosaic virus CP gene for coat...  73.8    1e-10
gb|AY611024.1|  Zucchini yellow mosaic virus isolate China 99/...  71.9    4e-10
gb|AY611022.1|  Zucchini yellow mosaic virus isolate CH99/87 p...  71.9    4e-10
gb|AY995216.1|  Zucchini yellow mosaic virus polyprotein gene,...  71.9    4e-10
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  69.9    2e-09
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  69.9    2e-09
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  69.9    2e-09
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  69.9    2e-09
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  69.9    2e-09
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  69.9    2e-09
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  69.9    2e-09
gb|DQ898194.1|  Hardenbergia mosaic virus isolate MU-1A polypr...  69.9    2e-09
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  69.9    2e-09
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  69.9    2e-09
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  69.9    2e-09
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  69.9    2e-09
gb|AF543212.1|  Potato virus A isolate U infectious clone 1, c...  69.9    2e-09
gb|AF543709.1|  Potato virus A isolate U clone 2, complete genome  69.9    2e-09
gb|S51667.1|  polyprotein [potato virus A PVA, Genomic RNA, 25...  69.9    2e-09
emb|AJ131402.1|PVI131402  Potato virus A RNA complete genome, ...  69.9    2e-09
emb|AJ131400.1|PVI131400  Potato virus A RNA complete genome, ...  69.9    2e-09
gb|AY995213.1|  Tamarillo mosaic virus polyprotein gene, parti...  69.9    2e-09
emb|Y10126.1|PAPSABNIB  Potato A potyvirus gene encoding coat ...  69.9    2e-09
emb|Y10125.1|PAPAFGNIB  Potato A potyvirus gene encoding coat ...  69.9    2e-09
emb|X91968.1|PAPCOATJ  Potato A potyvirus coat protein gene (i...  69.9    2e-09
emb|Y11425.1|PAPTAN  Potato A potyvirus mRNA for NIb replicase...  69.9    2e-09
emb|Y11424.1|PAPPEN  Potato A potyvirus mRNA for NIb replicase...  69.9    2e-09
emb|Y11423.1|PAPLIN  Potato A potyvirus mRNA for NIb replicase...  69.9    2e-09
emb|Y11422.1|PAPALC  Potato A potyvirus mRNA for NIb replicase...  69.9    2e-09
emb|Y11421.1|PAPHER  Potato A potyvirus mRNA for NIb replicase...  69.9    2e-09

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGAG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  391  ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGAG  429


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  170 bits (86),  Expect = 6e-40
 Identities = 95/98 (96%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GACGATGAAAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| |||||||||||| |||||||||||||||||
Sbjct  391  ACTTCACCTGACGTGAATGGGGTGTGGACCATGATGGA  428


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GACGAAGACAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| ||| ||||||||||||||||| ||||||||
Sbjct  391  ACTTCACCTGATGTGAATGGAGTGTGGACAATGATGGA  428


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  343  GACGAAGACAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  402

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| ||| ||||||||||||||||| ||||||||
Sbjct  403  ACTTCACCTGATGTGAATGGAGTGTGGACAATGATGGA  440


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  359  GACGATGACAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  418

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            || |||| ||| |||||||| |||||||||||||||||
Sbjct  419  ACCTCACCTGATGTGAATGGGGTGTGGACCATGATGGA  456


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  155 bits (78),  Expect = 4e-35
 Identities = 93/98 (94%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  GACGATGACAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  393

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            || |||| ||| |||||||| |||||||||||||||||
Sbjct  394  ACCTCACCTGATGTGAATGGGGTGTGGACCATGATGGA  431


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 86/89 (96%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  340  AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACCT  399

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || || |||||||||||||||||||||||
Sbjct  400  GATGTAAATGGAGTGTGGACCATGATGGA  428


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 86/89 (96%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  340  AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACCT  399

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || || |||||||||||||||||||||||
Sbjct  400  GATGTAAATGGAGTGTGGACCATGATGGA  428


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  147 bits (74),  Expect = 9e-33
 Identities = 92/98 (93%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  359  GACGATGACAAGATGGGTGGTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  418

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            || |||| ||| |||||||| |||||||||||||||||
Sbjct  419  ACCTCACCTGATGTGAATGGGGTGTGGACCATGATGGA  456


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 85/89 (95%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct  340  AAGATGGGTGTTATCATGAATAGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACCT  399

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || || |||||||||||||||||||||||
Sbjct  400  GATGTAAATGGAGTGTGGACCATGATGGA  428


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 85/89 (95%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct  340  AAGATGGGTGTTATCATGAATAGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACCT  399

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || || |||||||||||||||||||||||
Sbjct  400  GATGTAAATGGAGTGTGGACCATGATGGA  428


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 94/99 (94%), Gaps = 2/99 (2%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GACGATGACAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGT-GGACCATGATGGA  98
            ||||||| ||| |||||||| |||| |||||||||||||
Sbjct  391  ACTTCACCTGATGTGAATGG-GTGTGGGACCATGATGGA  428


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  331  GACGATGACAAGATGGGTGTTATCATGAATGGGTTCATGGTCTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGAG  99
            ||||||||  | || || |||||||||||||||||||||
Sbjct  391  ACTTCACTGAATGTTAAAGGAGTGTGGACCATGATGGAG  429


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 91/98 (92%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  GACGATGACAAAATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  390

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| ||| || ||||| || ||||||||||||||
Sbjct  391  ACTTCACCTGATGTAAATGGGGTTTGGACCATGATGGA  428


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 91/98 (92%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  GACGATGACAAAATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  393

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| ||| || ||||| || ||||||||||||||
Sbjct  394  ACTTCACCTGATGTAAATGGGGTTTGGACCATGATGGA  431


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 91/98 (92%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  GACGATGACAAAATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  393

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            ||||||| ||| || ||||| || ||||||||||||||
Sbjct  394  ACTTCACCTGATGTAAATGGGGTTTGGACCATGATGGA  431


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 88/95 (92%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4     GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
             ||||| |||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct  961   GATGACAAGATGGGTGTTATAATGAATGGATTTATGGTTTGGTGCATTGAAAATGGAACT  1020

Query  64    TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
             |||| |||| | |||||||||||||||||||||||
Sbjct  1021  TCACCTGACATAAATGGAGTGTGGACCATGATGGA  1055


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 87/95 (91%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct  577  GATGACAAGATGGGTGTTATAATGAATGGTTTCATGGTTTGGTGCATCGAGAATGGAACT  636

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| |||| | |||||||||||||||||||||||
Sbjct  637  TCACCTGACATAAATGGAGTGTGGACCATGATGGA  671


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 86/95 (90%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||||||| | |||||||| |||||||||||||||||||||||||| |||
Sbjct  334  GATGACAAGATGGGTGTTGTAATGAATGGATTCATGGTTTGGTGCATTGAAAATGGGACT  393

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||||||||| ||||||||
Sbjct  394  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  428


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 86/95 (90%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||||||| | |||||||| |||||||||||||||||||||||||| |||
Sbjct  334  GATGACAAGATGGGTGTTGTAATGAATGGATTCATGGTTTGGTGCATTGAAAATGGGACT  393

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||||||||| ||||||||
Sbjct  394  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  428


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 86/95 (90%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||||||| | |||||||| |||||||||||||||||||||||||| |||
Sbjct  334  GATGACAAGATGGGTGTTGTAATGAATGGATTCATGGTTTGGTGCATTGAAAATGGGACT  393

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||||||||| ||||||||
Sbjct  394  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  428


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 88/98 (89%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACGATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGA  60
            |||||||| ||||||  ||||||||||||||| || ||||| ||||||||||||||||||
Sbjct  523  GACGATGACAAGATGTCTGTTATCATGAATGGTTTTATGGTGTGGTGCATTGAAAATGGA  582

Query  61   ACTTCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            || |||| ||| ||||||||||| ||||||||||||||
Sbjct  583  ACCTCACCTGATGTGAATGGAGTATGGACCATGATGGA  620


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 81/89 (91%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            |||||| |||| || |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct  580  AAGATGAGTGTAATTATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGAACCTCACCT  639

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || ||||||||||||||||| ||||||||
Sbjct  640  GATGTGAATGGAGTGTGGACTATGATGGA  668


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 85/95 (89%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct  794  GATGACAAGATGGGTGTTGTCATGAATGGATTCATGGTTTGGTGCATTGAAAATGGGACT  853

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||  ||||| ||||||||
Sbjct  854  TCACCTGATGTTAATGGAGGTTGGACTATGATGGA  888


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  105 bits (53),  Expect = 3e-20
 Identities = 80/89 (89%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10    AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
             |||||| |||| || |||||||| |||||||| |||||||||||||||||||| |||| |
Sbjct  8749  AAGATGAGTGTAATTATGAATGGTTTCATGGTATGGTGCATTGAAAATGGAACCTCACCT  8808

Query  70    GACGTGAATGGAGTGTGGACCATGATGGA  98
             || ||||||||||||||||| ||||||||
Sbjct  8809  GATGTGAATGGAGTGTGGACTATGATGGA  8837


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  105 bits (53),  Expect = 3e-20
 Identities = 80/89 (89%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            |||||| |||| || |||||||| |||||||| |||||||||||||||||||| |||| |
Sbjct  505  AAGATGAGTGTAATTATGAATGGTTTCATGGTATGGTGCATTGAAAATGGAACCTCACCT  564

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || ||||||||||||||||| ||||||||
Sbjct  565  GATGTGAATGGAGTGTGGACTATGATGGA  593


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  105 bits (53),  Expect = 3e-20
 Identities = 80/89 (89%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  10   AAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTT  69
            ||||||| ||||||||||||||| || ||||| |||||||||||||| |||||||||| |
Sbjct  439  AAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGAACTTCACCT  498

Query  70   GACGTGAATGGAGTGTGGACCATGATGGA  98
            || |||||||| || ||||||||||||||
Sbjct  499  GATGTGAATGGGGTATGGACCATGATGGA  527


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 84/95 (88%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4     GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
             ||||| |||||||| || || ||||| || ||||||||||||||||| ||||||||||||
Sbjct  946   GATGACAAGATGGGAGTAATTATGAACGGTTTCATGGTTTGGTGCATCGAAAATGGAACT  1005

Query  64    TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
             |||| ||| || |||||||||||||| ||||||||
Sbjct  1006  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  1040


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 84/95 (88%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||| || || ||||| || ||||||||||||||||| ||||||||||||
Sbjct  685  GATGACAAGATGGGAGTAATTATGAACGGTTTCATGGTTTGGTGCATCGAAAATGGAACT  744

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||||||||| ||||||||
Sbjct  745  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  779


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 84/95 (88%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            ||||| |||||||| || || ||||| || ||||||||||||||||| ||||||||||||
Sbjct  685  GATGACAAGATGGGAGTAATTATGAACGGTTTCATGGTTTGGTGCATCGAAAATGGAACT  744

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| || |||||||||||||| ||||||||
Sbjct  745  TCACCTGATGTTAATGGAGTGTGGACTATGATGGA  779


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 83/95 (87%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  4    GATGATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACT  63
            |||||||| ||| ||||| |||||||||| || ||||| |||||||||||||| ||||| 
Sbjct  379  GATGATAAAATGCGTGTTGTCATGAATGGCTTTATGGTATGGTGCATTGAAAACGGAACC  438

Query  64   TCACTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            |||| ||| ||||| ||||||||||| ||||||||
Sbjct  439  TCACCTGATGTGAACGGAGTGTGGACAATGATGGA  473


>gb|AY611021.1| Zucchini yellow mosaic virus isolate CH99/116 polyprotein gene, 
partial cds
Length=1176

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 77/88 (87%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  506  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  565

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            || | ||||||||||||  |||||||||
Sbjct  566  ACATTAATGGAGTGTGGGTCATGATGGA  593


>gb|AF513551.1| Zucchini yellow mosaic virus isolate ningbo coat protein gene, 
partial cds
Length=1053

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 77/88 (87%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  412

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            || | ||||||||||||  |||||||||
Sbjct  413  ACATTAATGGAGTGTGGGTCATGATGGA  440


>gb|AF513550.1| Zucchini yellow mosaic virus isolate shangyu coat protein gene, 
partial cds
Length=1053

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 77/88 (87%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  412

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            || | ||||||||||||  |||||||||
Sbjct  413  ACATTAATGGAGTGTGGGTCATGATGGA  440


>gb|AY074810.1| Zucchini yellow mosaic virus isolate Ningbo coat protein gene, 
partial cds
Length=1053

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 77/88 (87%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  412

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            || | ||||||||||||  |||||||||
Sbjct  413  ACATTAATGGAGTGTGGGTCATGATGGA  440


>gb|AY074809.1| Zucchini yellow mosaic virus isolate Beijing coat protein gene, 
partial cds
Length=1053

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 77/88 (87%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  412

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            || | ||||||||||||  |||||||||
Sbjct  413  ACATTAATGGAGTGTGGGTCATGATGGA  440


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 80/92 (86%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  7    GATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  66
            |||||||||| ||||||||||||||| || ||||| |||||||||||||| || ||||| 
Sbjct  412  GATAAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGGACTTCG  471

Query  67   CTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            | ||| |||||||| || ||||| ||||||||
Sbjct  472  CCTGATGTGAATGGGGTATGGACTATGATGGA  503


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 80/92 (86%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  7    GATAAGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCA  66
            |||||||||| ||||||||||||||| || ||||| |||||||||||||| || ||||| 
Sbjct  400  GATAAGATGGCTGTTATCATGAATGGTTTTATGGTCTGGTGCATTGAAAACGGGACTTCG  459

Query  67   CTTGACGTGAATGGAGTGTGGACCATGATGGA  98
            | ||| |||||||| || ||||| ||||||||
Sbjct  460  CCTGATGTGAATGGGGTATGGACTATGATGGA  491


>emb|AJ420020.1|ZYE420020 Zucchini yellow mosaic virus genomic RNA for polyprotein gene, 
NIb protein and coat protein region, isolate Italy 1
Length=1130

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 68/77 (88%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  450  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  509

Query  71   ACGTGAATGGAGTGTGG  87
            || | ||||||||||||
Sbjct  510  ACATCAATGGAGTGTGG  526


>dbj|D00692.1|ZYMV Zucchini yellow mosaic virus gene for polyprotein precursor, 
partial cds
Length=1546

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 68/77 (88%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| |||||||  |
Sbjct  848  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCG  907

Query  71   ACGTGAATGGAGTGTGG  87
            || | ||||||||||||
Sbjct  908  ACATTAATGGAGTGTGG  924


>emb|AM422386.1| Zucchini yellow mosaic virus gene for polyprotein, genomic RNA
Length=9591

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  8895  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  8954

Query  71    ACGTGAATGGAGTGTGGACCATGATGGA  98
             |  | ||||||||||||  |||||||||
Sbjct  8955  ATATCAATGGAGTGTGGTTCATGATGGA  8982


>gb|AY611026.1| Zucchini yellow mosaic virus isolate HN-01 from watermelon polyprotein 
gene, partial cds
Length=1224

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  488  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  547

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  548  ATATTAATGGAGTGTGGTTCATGATGGA  575


>gb|AF127929.2|AF127929 Zucchini yellow mosaic virus isolate TW-TN3 complete genome
Length=9591

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  8894  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  8953

Query  71    ACGTGAATGGAGTGTGGACCATGATGGA  98
             |  | ||||||||||||  |||||||||
Sbjct  8954  ATATCAATGGAGTGTGGTTCATGATGGA  8981


>gb|AF435425.1|AF435425 Zucchini yellow mosaic virus coat protein gene, partial cds
Length=1052

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  353  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  412

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  413  ATATCAATGGAGTGTGGTTCATGATGGA  440


>emb|AJ429071.1|ZYE429071 Zucchini yellow mosaic virus polyprotein gene, strain A, genomic 
RNA
Length=5962

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11    AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
             ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  5264  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  5323

Query  71    ACGTGAATGGAGTGTGGACCATGATGGA  98
             |  | ||||||||||||  |||||||||
Sbjct  5324  ATATCAATGGAGTGTGGTTCATGATGGA  5351


>gb|AF127934.1|AF127934 Zucchini yellow mosaic virus isolate TW-PT5 polyprotein gene, 
partial cds
Length=1105

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  468

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  469  ATATCAATGGAGTGTGGTTCATGATGGA  496


>gb|AF127932.1|AF127932 Zucchini yellow mosaic virus isolate TW-TNML1 polyprotein gene, 
partial cds
Length=1105

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  468

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  469  ATATCAATGGAGTGTGGTTCATGATGGA  496


>gb|AF127931.1|AF127931 Zucchini yellow mosaic virus isolate TW-TC1 polyprotein gene, 
partial cds
Length=1106

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  468

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  469  ATATCAATGGAGTGTGGTTCATGATGGA  496


>gb|AF127930.1|AF127930 Zucchini yellow mosaic virus isolate TW-CY2 polyprotein gene, 
partial cds
Length=1105

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  409  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTG  468

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  469  ATATCAATGGAGTGTGGTTCATGATGGA  496


>dbj|AB004640.1| Zucchini yellow mosaic virus genomic RNA for polyprotein (POL/COP 
region), partial cds, strain 169
Length=1172

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 76/88 (86%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  11   AGATGGGTGTTATCATGAATGGGTTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTG  70
            ||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct  485  AGATGGGAGTTGTAATGAATGGTTTCATGGTTTGGTGCATTGAAAATGGTACTTCGCCTG  544

Query  71   ACGTGAATGGAGTGTGGACCATGATGGA  98
            |  | ||||||||||||  |||||||||
Sbjct  545  ATATCAATGGAGTGTGGTTCATGATGGA  572



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 16, 2008  5:48 PM
  Number of letters in database: 1,742,519,153
  Number of sequences in database:  6,582,065

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6582065
Number of Hits to DB: 21403825
Number of extensions: 1048027
Number of successful extensions: 300060
Number of sequences better than 10: 1445
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 300055
Number of HSP's successfully gapped: 1448
Length of query: 99
Length of database: 23217355633
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23079132268
Effective search space: 1800172316904
Effective search space used: 1800172316904
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY5E29NB016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|364-462
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   149    2e-33
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   113    1e-22
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   111    5e-22
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   111    5e-22
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   111    5e-22
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   109    2e-21
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   109    2e-21
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   109    2e-21
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   103    1e-19
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   103    1e-19
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   103    1e-19
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  99.6    2e-18
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  97.6    7e-18
gb|EF547367.1|  South African passiflora virus polyprotein gen...  95.6    3e-17
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  95.6    3e-17
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  95.6    3e-17
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  95.6    3e-17
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  95.6    3e-17
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  95.6    3e-17
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...  89.7    2e-15
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  89.7    2e-15
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...  89.7    2e-15
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...  89.7    2e-15
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  89.7    2e-15
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  89.7    2e-15
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...  87.7    7e-15
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  83.8    1e-13
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  75.8    3e-11
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  73.8    1e-10
gb|AY611021.1|  Zucchini yellow mosaic virus isolate CH99/116 ...  73.8    1e-10
gb|AF513551.1|  Zucchini yellow mosaic virus isolate ningbo co...  73.8    1e-10
gb|AF513550.1|  Zucchini yellow mosaic virus isolate shangyu c...  73.8    1e-10
gb|AY074810.1|  Zucchini yellow mosaic virus isolate Ningbo co...  73.8    1e-10
gb|AY074809.1|  Zucchini yellow mosaic virus isolate Beijing c...  73.8    1e-10
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  73.8    1e-10
gb|DQ898203.1|  Hardenbergia mosaic virus isolate Sb-19-4 poly...  67.9    7e-09
gb|DQ898202.1|  Hardenbergia mosaic virus isolate Sb-19-1 poly...  67.9    7e-09
emb|AJ420020.1|ZYE420020  Zucchini yellow mosaic virus genomic...  67.9    7e-09
dbj|D00692.1|ZYMV  Zucchini yellow mosaic virus gene for polyp...  67.9    7e-09
emb|AM422386.1|  Zucchini yellow mosaic virus gene for polypro...  65.9    3e-08
gb|AY611026.1|  Zucchini yellow mosaic virus isolate HN-01 fro...  65.9    3e-08
gb|AF543212.1|  Potato virus A isolate U infectious clone 1, c...  65.9    3e-08
gb|AF543709.1|  Potato virus A isolate U clone 2, complete genome  65.9    3e-08
gb|AY278998.1|  Zucchini yellow mosaic virus strain KR-PA comp...  65.9    3e-08
gb|AF127929.2|AF127929  Zucchini yellow mosaic virus isolate T...  65.9    3e-08
gb|AF435425.1|AF435425  Zucchini yellow mosaic virus coat prot...  65.9    3e-08
gb|S51667.1|  polyprotein [potato virus A PVA, Genomic RNA, 25...  65.9    3e-08
emb|AJ429071.1|ZYE429071  Zucchini yellow mosaic virus polypro...  65.9    3e-08
emb|AJ316228.2|ZYE316228  Zucchini yellow mosaic virus gene fo...  65.9    3e-08
emb|AJ131402.1|PVI131402  Potato virus A RNA complete genome, ...  65.9    3e-08
emb|AJ131400.1|PVI131400  Potato virus A RNA complete genome, ...  65.9    3e-08
gb|AY995213.1|  Tamarillo mosaic virus polyprotein gene, parti...  65.9    3e-08
emb|Y10126.1|PAPSABNIB  Potato A potyvirus gene encoding coat ...  65.9    3e-08
emb|Y10125.1|PAPAFGNIB  Potato A potyvirus gene encoding coat ...  65.9    3e-08
emb|X91968.1|PAPCOATJ  Potato A potyvirus coat protein gene (i...  65.9    3e-08
emb|Y11425.1|PAPTAN  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
emb|Y11424.1|PAPPEN  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
emb|Y11423.1|PAPLIN  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
emb|Y11422.1|PAPALC  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
emb|Y11421.1|PAPHER  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
emb|Y11420.1|PAPPIT  Potato A potyvirus mRNA for NIb replicase...  65.9    3e-08
gb|AF127934.1|AF127934  Zucchini yellow mosaic virus isolate T...  65.9    3e-08
gb|AF127932.1|AF127932  Zucchini yellow mosaic virus isolate T...  65.9    3e-08
gb|AF127931.1|AF127931  Zucchini yellow mosaic virus isolate T...  65.9    3e-08
gb|AF127930.1|AF127930  Zucchini yellow mosaic virus isolate T...  65.9    3e-08
gb|DQ315384.1|  Potato virus A coat protein mRNA, partial cds      65.9    3e-08
gb|DQ309063.1|  Potato virus A isolate Yunnan-1 coat protein (...  65.9    3e-08
emb|AJ316227.1|ZYE316227  Zucchini yellow mosaic virus genomic...  65.9    3e-08
emb|AJ307035.1|PVI307035  Potato virus A genomic RNA for parti...  65.9    3e-08
emb|Z49088.1|PVAMNIBCP  Potato virus A (Maine) mRNA for nuclea...  65.9    3e-08
emb|Z49087.1|PVAUNIBCP  Potato virus A (USA) mRNA for nuclear ...  65.9    3e-08
dbj|AB004640.1|  Zucchini yellow mosaic virus genomic RNA for ...  65.9    3e-08
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  61.9    4e-07
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  61.9    4e-07
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  61.9    4e-07
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  61.9    4e-07
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  61.9    4e-07
gb|DQ898194>1|  Hardenbergia mosaic virus isolate MU-1A polypr...  61.9    4e-07
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  61.9    4e-07
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  61.9    4e-07
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  61.9    4e-07
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  61.9    4e-07
gb|U67149.1|PFU67149  Passion fruit woodiness virus coat prote...  61.9    4e-07
dbj|AB000836.1|  Onion yellow dwarf virus NIb gene for polypro...  61.9    4e-07
gb|EU371650.1|  Zucchini yellow mosaic virus isolate H8 polypr...  60.0    2e-06
gb|EU371649.1|  Zucchini yellow mosaic virus isolate leaves po...  60.0    2e-06
gb|EU371648.1|  Zucchini yellow mosaic virus isolate L5 polypr...  60.0    2e-06
gb|EU371647.1|  Zucchini yellow mosaic virus isolate J7228 pol...  60.0    2e-06
gb|EU371646.1|  Zucchini yellow mosaic virus isolate G6228 pol...  60.0    2e-06
gb|EU371645.1|  Zucchini yellow mosaic virus isolate J787 poly...  60.0    2e-06
gb|DQ978272.1|  Zucchini yellow mosaic virus isolate ZYMV-KZN ...  60.0    2e-06
gb|DQ645729.1|  Zucchini yellow mosaic virus isolate ZYMV C-16...  60.0    2e-06
dbj|AB188116.1|  Zucchini yellow mosaic virus genomic RNA, com...  60.0    2e-06
dbj|AB188115.1|  Zucchini yellow mosaic virus genomic RNA, com...  60.0    2e-06
gb|AF348610.1|  Pepper yellow mosaic virus polyprotein gene, p...  60.0    2e-06
emb|AJ437279.1|  Wild potato mosaic virus complete genome          60.0    2e-06
emb|AJ316229.2|ZYE316229  Zucchini yellow mosaic virus gene fo...  60.0    2e-06
emb|AJ131403.1|PVI131403  Potato virus A RNA complete genome, ...  60.0    2e-06
gb|DQ333806.1|  Zucchini yellow mosaic virus polyprotein-like ...  60.0    2e-06

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  424  ATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCC  462


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||| ||||||||||||||||||||||||||  | || || |||||||||||||||
Sbjct  364  TTCATGGTCTGGTGCATTGAAAATGGAACTTCACTGAATGTTAAAGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  424  ATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCC  462


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 63/65 (96%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGACGTGAATGGGGTGTGGACCATG  423

Query  61   ATGGA  65
            |||||
Sbjct  424  ATGGA  428


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 68/72 (94%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 68/72 (94%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 68/72 (94%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 67/71 (94%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGAGTGTGGACCATG  423

Query  61   ATGGAGGGGGA  71
            ||||| |||||
Sbjct  424  ATGGATGGGGA  434


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 67/71 (94%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTGAATGGAGTGTGGACAATG  423

Query  61   ATGGAGGGGGA  71
            ||||| |||||
Sbjct  424  ATGGATGGGGA  434


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 67/71 (94%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTGAATGGAGTGTGGACAATG  435

Query  61   ATGGAGGGGGA  71
            ||||| |||||
Sbjct  436  ATGGATGGGGA  446


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 67/72 (93%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||
Sbjct  392  TTCATGGTTTGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGGGTGTGGACCATG  451

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  452  ATGGATGGGGAT  463


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 67/72 (93%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||
Sbjct  367  TTCATGGTTTGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGGGTGTGGACCATG  426

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  427  ATGGATGGGGAT  438


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 67/72 (93%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||
Sbjct  392  TTCATGGTTTGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGGGTGTGGACCATG  451

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  452  ATGGATGGGGAT  463


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 99.6 bits (50),  Expect = 2e-18
 Identities = 59/62 (95%), Gaps = 0/62 (0%)
 Strand=Plus/Plus

Query  4     ATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATGATG  63
             ||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct  994   ATGGTTTGGTGCATTGAAAATGGAACTTCACCTGACATAAATGGAGTGTGGACCATGATG  1053

Query  64    GA  65
             ||
Sbjct  1054  GA  1055


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 97.6 bits (49),  Expect = 7e-18
 Identities = 61/65 (93%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||
Sbjct  604  TTCATGGTTTGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGAGTGTGGACTATG  663

Query  61   ATGGA  65
            |||||
Sbjct  664  ATGGA  668


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             ||||||||||||||||| |||||||||||||||| ||| || |||||||||||||| |||
Sbjct  976   TTCATGGTTTGGTGCATCGAAAATGGAACTTCACCTGATGTTAATGGAGTGTGGACTATG  1035

Query  61    ATGGAGGGGGAT  72
             ||||| ||||||
Sbjct  1036  ATGGATGGGGAT  1047


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||||| ||| || |||||||||||||| |||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGGACTTCACCTGATGTTAATGGAGTGTGGACTATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||||| ||| || |||||||||||||| |||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGGACTTCACCTGATGTTAATGGAGTGTGGACTATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||||| ||| || |||||||||||||| |||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGGACTTCACCTGATGTTAATGGAGTGTGGACTATG  423

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  424  ATGGATGGGGAT  435


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||| |||||||||||||||| ||| || |||||||||||||| |||
Sbjct  715  TTCATGGTTTGGTGCATCGAAAATGGAACTTCACCTGATGTTAATGGAGTGTGGACTATG  774

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  775  ATGGATGGGGAT  786


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 66/72 (91%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||| |||||||||||||||| ||| || |||||||||||||| |||
Sbjct  715  TTCATGGTTTGGTGCATCGAAAATGGAACTTCACCTGATGTTAATGGAGTGTGGACTATG  774

Query  61   ATGGAGGGGGAT  72
            ||||| ||||||
Sbjct  775  ATGGATGGGGAT  786


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||| || |||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGGGTTTGGACCATG  423

Query  61   ATGGA  65
            |||||
Sbjct  424  ATGGA  428


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||| |||
Sbjct  8773  TTCATGGTATGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGAGTGTGGACTATG  8832

Query  61    ATGGA  65
             |||||
Sbjct  8833  ATGGA  8837


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||| || |||||||||
Sbjct  367  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGGGTTTGGACCATG  426

Query  61   ATGGA  65
            |||||
Sbjct  427  ATGGA  431


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||||||||||| ||| || ||||| || |||||||||
Sbjct  367  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTAAATGGGGTTTGGACCATG  426

Query  61   ATGGA  65
            |||||
Sbjct  427  ATGGA  431


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            ||||||||||||||||| || ||||||||||||| |||| | ||||||||||||||||||
Sbjct  607  TTCATGGTTTGGTGCATCGAGAATGGAACTTCACCTGACATAAATGGAGTGTGGACCATG  666

Query  61   ATGGA  65
            |||||
Sbjct  667  ATGGA  671


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 60/65 (92%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||| |||
Sbjct  529  TTCATGGTATGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGAGTGTGGACTATG  588

Query  61   ATGGA  65
            |||||
Sbjct  589  ATGGA  593


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 67/72 (93%), Gaps = 2/72 (2%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGT-GGACCAT  59
            |||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||
Sbjct  364  TTCATGGTTTGGTGCATTGAAAATGGAACTTCACCTGATGTGAATGG-GTGTGGGACCAT  422

Query  60   GATGGAGGGGGA  71
            |||||| |||||
Sbjct  423  GATGGACGGGGA  434


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 57/62 (91%), Gaps = 0/62 (0%)
 Strand=Plus/Plus

Query  4    ATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATGATG  63
            ||||| |||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||
Sbjct  559  ATGGTGTGGTGCATTGAAAATGGAACCTCACCTGATGTGAATGGAGTATGGACCATGATG  618

Query  64   GA  65
            ||
Sbjct  619  GA  620


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 56/62 (90%), Gaps = 0/62 (0%)
 Strand=Plus/Plus

Query  4    ATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATGATG  63
            ||||| |||||||||||||| |||||||||| ||| |||||||| || ||||||||||||
Sbjct  466  ATGGTCTGGTGCATTGAAAACGGAACTTCACCTGATGTGAATGGGGTATGGACCATGATG  525

Query  64   GA  65
            ||
Sbjct  526  GA  527


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||||| ||| || |||||||  ||||| |||
Sbjct  824  TTCATGGTTTGGTGCATTGAAAATGGGACTTCACCTGATGTTAATGGAGGTTGGACTATG  883

Query  61   ATGGA  65
            |||||
Sbjct  884  ATGGA  888


>gb|AY611021.1| Zucchini yellow mosaic virus isolate CH99/116 polyprotein gene, 
partial cds
Length=1176

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||  ||||
Sbjct  529  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGGGTCATG  588

Query  61   ATGGA  65
            |||||
Sbjct  589  ATGGA  593


>gb|AF513551.1| Zucchini yellow mosaic virus isolate ningbo coat protein gene, 
partial cds
Length=1053

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||  ||||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGGGTCATG  435

Query  61   ATGGA  65
            |||||
Sbjct  436  ATGGA  440


>gb|AF513550.1| Zucchini yellow mosaic virus isolate shangyu coat protein gene, 
partial cds
Length=1053

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||  ||||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGGGTCATG  435

Query  61   ATGGA  65
            |||||
Sbjct  436  ATGGA  440


>gb|AY074810.1| Zucchini yellow mosaic virus isolate Ningbo coat protein gene, 
partial cds
Length=1053

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||  ||||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGGGTCATG  435

Query  61   ATGGA  65
            |||||
Sbjct  436  ATGGA  440


>gb|AY074809.1| Zucchini yellow mosaic virus isolate Beijing coat protein gene, 
partial cds
Length=1053

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 58/65 (89%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||  ||||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGGGTCATG  435

Query  61   ATGGA  65
            |||||
Sbjct  436  ATGGA  440


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 61/69 (88%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  4    ATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATGATG  63
            ||||| |||||||||||||| ||||| |||| ||| ||||| ||||||||||| ||||||
Sbjct  412  ATGGTATGGTGCATTGAAAACGGAACCTCACCTGATGTGAACGGAGTGTGGACAATGATG  471

Query  64   GAGGGGGAT  72
            || ||||||
Sbjct  472  GATGGGGAT  480


>gb|DQ898203.1| Hardenbergia mosaic virus isolate Sb-19-4 polyprotein gene, partial 
cds
Length=828

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 46/50 (92%), Gaps = 0/50 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGT  50
            |||||||||||||||||||| |||||||| ||||  ||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGACAATGGAACATCACCAGACGTGAATGGAGT  413


>gb|DQ898202.1| Hardenbergia mosaic virus isolate Sb-19-1 polyprotein gene, partial 
cds
Length=828

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 46/50 (92%), Gaps = 0/50 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGT  50
            |||||||||||||||||||| |||||||| ||||  ||||||||||||||
Sbjct  364  TTCATGGTTTGGTGCATTGACAATGGAACATCACCAGACGTGAATGGAGT  413


>emb|AJ420020.1|ZYE420020 Zucchini yellow mosaic virus genomic RNA for polyprotein gene, 
NIb protein and coat protein region, isolate Italy 1
Length=1130

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 49/54 (90%), Gaps = 0/54 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGG  54
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||
Sbjct  473  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATCAATGGAGTGTGG  526


>dbj|D00692.1|ZYMV Zucchini yellow mosaic virus gene for polyprotein precursor, 
partial cds
Length=1546

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 49/54 (90%), Gaps = 0/54 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGG  54
            |||||||||||||||||||||||||| |||||||  ||| | ||||||||||||
Sbjct  871  TTCATGGTTTGGTGCATTGAAAATGGCACTTCACCCGACATTAATGGAGTGTGG  924


>emb|AM422386.1| Zucchini yellow mosaic virus gene for polyprotein, genomic RNA
Length=9591

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  8918  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATCAATGGAGTGTGGTTCATG  8977

Query  61    ATGGA  65
             |||||
Sbjct  8978  ATGGA  8982


>gb|AY611026.1| Zucchini yellow mosaic virus isolate HN-01 from watermelon polyprotein 
gene, partial cds
Length=1224

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  511  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATTAATGGAGTGTGGTTCATG  570

Query  61   ATGGA  65
            |||||
Sbjct  571  ATGGA  575


>gb|AF543212.1| Potato virus A isolate U infectious clone 1, complete genome
Length=9598

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||| ||||||||||| ||||||||||| |  ||| | |||||||| |||||||||
Sbjct  8880  TTCATGGTATGGTGCATTGAGAATGGAACTTCTCCAGACATTAATGGAGTTTGGACCATG  8939

Query  61    ATGGA  65
             |||||
Sbjct  8940  ATGGA  8944


>gb|AF543709.1| Potato virus A isolate U clone 2, complete genome
Length=9598

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||| ||||||||||| ||||||||||| |  ||| | |||||||| |||||||||
Sbjct  8880  TTCATGGTATGGTGCATTGAGAATGGAACTTCTCCAGACATTAATGGAGTTTGGACCATG  8939

Query  61    ATGGA  65
             |||||
Sbjct  8940  ATGGA  8944


>gb|AY278998.1| Zucchini yellow mosaic virus strain KR-PA complete genome
Length=9593

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||||||||||||||||||||| || |||| |||| | |||||||| |||  ||||
Sbjct  8918  TTCATGGTTTGGTGCATTGAAAATGGTACGTCACCTGACATTAATGGAGTCTGGGTCATG  8977

Query  61    ATGGA  65
             |||||
Sbjct  8978  ATGGA  8982


>gb|AF127929.2|AF127929 Zucchini yellow mosaic virus isolate TW-TN3 complete genome
Length=9591

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  8917  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATCAATGGAGTGTGGTTCATG  8976

Query  61    ATGGA  65
             |||||
Sbjct  8977  ATGGA  8981


>gb|AF435425.1|AF435425 Zucchini yellow mosaic virus coat protein gene, partial cds
Length=1052

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1    TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
            |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  376  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATCAATGGAGTGTGGTTCATG  435

Query  61   ATGGA  65
            |||||
Sbjct  436  ATGGA  440


>gb|S51667.1| polyprotein [potato virus A PVA, Genomic RNA, 2597 nt]
Length=2597

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||| ||||||||||| ||||||||||| |  ||| | |||||||| |||||||||
Sbjct  1909  TTCATGGTATGGTGCATTGAGAATGGAACTTCTCCAGACATTAATGGAGTTTGGACCATG  1968

Query  61    ATGGA  65
             |||||
Sbjct  1969  ATGGA  1973


>emb|AJ429071.1|ZYE429071 Zucchini yellow mosaic virus polyprotein gene, strain A, genomic 
RNA
Length=5962

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  5287  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATCAATGGAGTGTGGTTCATG  5346

Query  61    ATGGA  65
             |||||
Sbjct  5347  ATGGA  5351


>emb|AJ316228.2|ZYE316228 Zucchini yellow mosaic virus gene for polyprotein, genomic RNA, 
isolate SG
Length=9592

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 57/65 (87%), Gaps = 0/65 (0%)
 Strand=Plus/Plus

Query  1     TTCATGGTTTGGTGCATTGAAAATGGAACTTCACTTGACGTGAATGGAGTGTGGACCATG  60
             |||||||||||||||||||||||||| ||||| | |||  | ||||||||||||  ||||
Sbjct  8918  TTCATGGTTTGGTGCATTGAAAATGGCACTTCGCCTGATATCAATGGAGTGTGGTTCATG  8977

Query  61    ATGGA  65
             |||||
Sbjct  8978  ATGGA  8982



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 23846303
Number of extensions: 1231504
Number of successful extensions: 326742
Number of sequences better than 10: 1057
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 326737
Number of HSP's successfully gapped: 1059
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY5PT6X1016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|397-495
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   165    4e-38
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...  52.0    4e-04
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...  52.0    4e-04
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...  52.0    4e-04
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...  52.0    4e-04
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...  50.1    0.002
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...  50.1    0.002
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...  50.1    0.002
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...  50.1    0.002
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...  48.1    0.006
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  48.1    0.006
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  46.1    0.024
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  46.1    0.024
gb|EF547367.1|  South African passiflora virus polyprotein gen...  44.1    0.095
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  44.1    0.095
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  44.1    0.095
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  44.1    0.095
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  44.1    0.095
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  44.1    0.095
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  44.1    0.095
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  44.1    0.095
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  44.1    0.095
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  44.1    0.095
gb|AC153728.1|  Mus musculus  BAC RP23-83N17 (Roswell Park Can...  42.1    0.38 
gb|AC139034.7|  Mus musculus chromosome 6, clone RP23-350J11, ...  42.1    0.38 
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  42.1    0.38 
gb|AC132480.5|  Mus musculus BAC clone RP23-11I14 from 6, comp...  42.1    0.38 
gb|CP000880.1|  Salmonella enterica subsp. arizonae serovar 62...  38.2    5.9  
gb|EF579955.1|  Moroccan watermelon mosaic virus isolate TN05-...  38.2    5.9  
emb|AM429800.2|  Vitis vinifera contig VV78X143458.7, whole ge...  38.2    5.9  
gb|EF211959.1|  Moroccan watermelon mosaic virus polyprotein g...  38.2    5.9  
gb|DQ977725.1|  Pennisetum mosaic virus isolate C, complete ge...  38.2    5.9  
gb|AC193021.3|  Pan troglodytes BAC clone CH251-497K18 from ch...  38.2    5.9  
gb|CP000444.1|  Shewanella sp. MR-7, complete genome               38.2    5.9  
gb|CP000446.1|  Shewanella sp. MR-4, complete genome               38.2    5.9  
gb|AC189703.2|  Pan troglodytes BAC clone CH251-98C24 from chr...  38.2    5.9  
gb|AY543166.1|  Pennisetum mosaic virus polyprotein gene, part...  38.2    5.9  
gb|AY172336.1|  Pennisetum mosaic virus polyprotein gene, part...  38.2    5.9  
gb|AF543212.1|  Potato virus A isolate U infectious clone 1, c...  38.2    5.9  
gb|AC096551.1|  Homo sapiens BAC clone RP11-22K23 from 7, comp...  38.2    5.9  
gb|AF543709.1|  Potato virus A isolate U clone 2, complete genome  38.2    5.9  
gb|AF493948.1|  Potato virus A isolate DMSZ coat protein mRNA,...  38.2    5.9  
gb|AE008847.1|  Salmonella typhimurium LT2, section 151 of 220...  38.2    5.9  
emb|X59985.1|PVACOATM  Potato virus A RNA 3'-terminal for coat...  38.2    5.9  
gr|AC093811.3|  Homo sapiens BAC clone RP11-355H11 from 4, com...  38.2    5.9  
gb|AC097714.3|  Homo sapiens BAC clone RP11-324H7 from 4, comp...  38.2    5.9  
gb|S51667.1|  polyprotein [potato virus A PVA, Genomic RNA, 25...  38.2    5.9  
gb|AF305545.1|AF305545  Moroccan watermelon mosaic virus polyp...  38.2    5.9  
emb|Z21670.1|PVCGA  Potato virus A complete genome                 38.2    5.9  
emb|AL627278.1|  Salmonella enterica serovar Typhi (Salmonella...  38.2    5.9  
gb|AY642590.1|  Pennisetum mosaic virus isolate B, complete ge...  38.2    5.9  
emb|AJ296311.1|POA296311  Potato A potyvirus mRNA for polyprotein  38.2    5.9  
emb|AJ131403.1|PVI131403  Potato virus A RNA complete genome, ...  38.2    5.9  
emb|AJ131402.1|PVI131402  Potato virus A RNA complete genome, ...  38.2    5.9  
emb|AJ131401.1|PVI131401  Potato virus A RNA complete genome, ...  38.2    5.9  
emb|AJ131400.1|PVI131400  Potato virus A RNA complete genome, ...  38.2    5.9  
gb|AY995213.1|  Tamarillo mosaic virus polyprotein gene, parti...  38.2    5.9  
gb|CP000026.1|  Salmonella enterica subsp. enterica serovar Pa...  38.2    5.9  
gb|AE014613.1|  Salmonella enterica subsp. enterica serovar Ty...  38.2    5.9  
gb|AE017220.1|  Salmonella enterica subsp. enterica serovar Ch...  38.2    5.9  
emb|Y10250.1|PAPADVNIB  Potato A potyvirus gene encoding coat ...  38.2    5.9  
emb|Y10126.1|PAPSABNIB  Potato A potyvirus gene encoding coat ...  38.2    5.9  
emb|Y10125.1|PAPAFGNIB  Potato A potyvirus gene encoding coat ...  38.2    5.9  
emb|X91968.1|PAPCOATJ  Potato A potyvirus coat protein gene (i...  38.2    5.9  
emb|X91966.1|PAPCOATA  Potato A potyvirus coat protein gene (i...  38.2    5.9  
emb|Y11427.1|PAP71612  Potato A potyvirus mRNA for NIb replica...  38.2    5.9  
emb|Y11426.1|PAPDAT  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11425.1|PAPTAN  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11424.1|PAPPEN  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11423.1|PAPLIN  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11422.1|PAPALC  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11421.1|PAPHER  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|Y11420.1|PAPPIT  Potato A potyvirus mRNA for NIb replicase...  38.2    5.9  
emb|X54804.1|TAMVCPG  Tamarillo mosaic virus gene for the coat...  38.2    5.9  
gb|DQ315384.1|  Potato virus A coat protein mRNA, partial cds      38.2    5.9  
gb|AC172370.2|  Gallus gallus BAC clone CH261-119J18 from chro...  38.2    5.9  
gb|DQ309063.1|  Potato virus A isolate Yunnan-1 coat protein (...  38.2    5.9  
emb|AJ307035.1|PVI307035  Potato virus A genomic RNA for parti...  38.2    5.9  
gb|AC131739.3|  Mus musculus BAC clone RP23-97B15 from 13, com...  38.2    5.9  
emb|Z49088.1|PVAMNIBCP  Potato virus A (Maine) mRNA for nuclea...  38.2    5.9  
emb|Z49087.1|PVAUNIBCP  Potato virus A (USA) mRNA for nuclear ...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTTGACGTGAATGGAGTGTGGACCATGATGGAGGGGGATCAAGCTGTTGAATTTTCACTC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  397  CTTGACGTGAATGGAGTGTGGACCATGATGGAGGGGGATCAAGCTGTTGAATTTTCACTC  456

Query  61   AACCCCCTCGTTGGATACCGCAAACCCCCGCTCCTGGCG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  457  AACCCCCTCGTTGGATACCGCAAACCCCCGCTCCTGGCG  495


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 86/87 (98%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  13   GGAGTGTGGACCATGATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTT  72
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  409  GGAGTGTGGACCATGATGGAGGGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTT  468

Query  73   GGATACCGCAAACCCCCGCTCCTGGCG  99
            |||||| ||||||||||||||||||||
Sbjct  469  GGATACTGCAAACCCCCGCTCCTGGCG  495


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 29/30 (96%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            ||||||||||||||||||||||| ||||||
Sbjct  406  AATGGAGTGTGGACCATGATGGATGGGGAT  435


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 29/30 (96%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            ||||||||||||||||||||||| ||||||
Sbjct  406  AATGGAGTGTGGACCATGATGGATGGGGAT  435


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 29/30 (96%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            ||||||||||||||||||||||| ||||||
Sbjct  406  AATGGAGTGTGGACCATGATGGATGGGGAT  435


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 29/30 (96%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  3    TGACGTGAATGGAGTGTGGACCATGATGGA  32
            |||||||||||| |||||||||||||||||
Sbjct  399  TGACGTGAATGGGGTGTGGACCATGATGGA  428


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 28/29 (96%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGA  38
            ||||||||||||||||||||||| |||||
Sbjct  406  AATGGAGTGTGGACCATGATGGATGGGGA  434


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 31/33 (93%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||| ||||||||||||||||| ||||||
Sbjct  431  GTGAATGGGGTGTGGACCATGATGGATGGGGAT  463


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 31/33 (93%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||| ||||||||||||||||| ||||||
Sbjct  406  GTGAATGGGGTGTGGACCATGATGGATGGGGAT  438


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score = 50.1 bits (25),  Expect = 0.002
 Identities = 31/33 (93%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||| ||||||||||||||||| ||||||
Sbjct  431  GTGAATGGGGTGTGGACCATGATGGATGGGGAT  463


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 30/32 (93%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGA  38
            ||||||||||||||||| |||||||| |||||
Sbjct  403  GTGAATGGAGTGTGGACAATGATGGATGGGGA  434


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 48.1 bits (24),  Expect = 0.006
 Identities = 30/32 (93%), Gaps = 0/32 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGA  38
            ||||||||||||||||| |||||||| |||||
Sbjct  415  GTGAATGGAGTGTGGACAATGATGGATGGGGA  446


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||||||||||||||||||
Sbjct  1033  AATGGAGTGTGGACCATGATGGA  1055


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGA  32
            |||||||||||||||||||||||
Sbjct  649  AATGGAGTGTGGACCATGATGGA  671


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGAGGGGGAT  39
             |||||||||||||| |||||||| ||||||
Sbjct  1018  AATGGAGTGTGGACTATGATGGATGGGGAT  1047


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||||||||| |||||||| ||||||
Sbjct  406  AATGGAGTGTGGACTATGATGGATGGGGAT  435


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||||||||| |||||||| ||||||
Sbjct  406  AATGGAGTGTGGACTATGATGGATGGGGAT  435


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||||||||| |||||||| ||||||
Sbjct  406  AATGGAGTGTGGACTATGATGGATGGGGAT  435


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  7     GTGAATGGAGTGTGGACCATGATGGA  32
             ||||||||||||||||| ||||||||
Sbjct  8812  GTGAATGGAGTGTGGACTATGATGGA  8837


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||||||||| |||||||| ||||||
Sbjct  757  AATGGAGTGTGGACTATGATGGATGGGGAT  786


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGA  32
            ||||||||||||||||| ||||||||
Sbjct  643  GTGAATGGAGTGTGGACTATGATGGA  668


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGA  32
            ||||||||||| ||||||||||||||
Sbjct  595  GTGAATGGAGTATGGACCATGATGGA  620


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGA  32
            ||||||||||||||||| ||||||||
Sbjct  568  GTGAATGGAGTGTGGACTATGATGGA  593


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGAGGGGGAT  39
            |||||||||||||| |||||||| ||||||
Sbjct  757  AATGGAGTGTGGACTATGATGGATGGGGAT  786


>gb|AC153728.1| Mus musculus  BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J 
Female) Mouse BAC Library) complete sequence
Length=226417

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  24      CATGATGGAGGGGGATCAAGC  44
               |||||||||||||||||||||
Sbjct  125972  CATGATGGAGGGGGATCAAGC  125992


>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
Length=247394

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  24     CATGATGGAGGGGGATCAAGC  44
              |||||||||||||||||||||
Sbjct  76899  CATGATGGAGGGGGATCAAGC  76919


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 30/33 (90%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  7    GTGAATGGAGTGTGGACCATGATGGAGGGGGAT  39
            ||||| ||||||||||| |||||||| ||||||
Sbjct  448  GTGAACGGAGTGTGGACAATGATGGATGGGGAT  480


>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
Length=230313

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  24      CATGATGGAGGGGGATCAAGC  44
               |||||||||||||||||||||
Sbjct  160907  CATGATGGAGGGGGATCAAGC  160887


>gb|CP000880.1| Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete 
genome
Length=4600800

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  77       ACCGCAAACCCCCGCTCCTGGCG  99
                ||||||||||||||| |||||||
Sbjct  4346153  ACCGCAAACCCCCGCCCCTGGCG  4346131


>gb|EF579955.1| Moroccan watermelon mosaic virus isolate TN05-76, complete genome
Length=9730

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             ||||| |||||||||||||||||
Sbjct  9115  AATGGCGTGTGGACCATGATGGA  9137


>emb|AM429800.2| Vitis vinifera contig VV78X143458.7, whole genome shotgun sequence
Length=21590

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  50     AATTTTCACTCAACCCCCT  68
              |||||||||||||||||||
Sbjct  10456  AATTTTCACTCAACCCCCT  10438


>gb|EF211959.1| Moroccan watermelon mosaic virus polyprotein gene, partial cds
Length=1647

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||||||||| ||||||||
Sbjct  1030  AATGGAGTGTGGACTATGATGGA  1052


>gb|DQ977725.1| Pennisetum mosaic virus isolate C, complete genome
Length=9611

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||||||||| ||||||||
Sbjct  8948  AATGGAGTGTGGACAATGATGGA  8970


>gb|AC193021.3| Pan troglodytes BAC clone CH251-497K18 from chromosome 7, complete 
sequence
Length=192184

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  51      ATTTTCACTCAACCCCCTC  69
               |||||||||||||||||||
Sbjct  177023  ATTTTCACTCAACCCCCTC  177041


>gb|CP000444.1| Shewanella sp. MR-7, complete genome
Length=4792610

 Features flanking this part of subject sequence:
   72 bp at 5' side: conserved hypothetical protein
   127 bp at 3' side: methylation site containing protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  43       GCTGTTGAATTTTCACTCA  61
                |||||||||||||||||||
Sbjct  3923352  GCTGTTGAATTTTCACTCA  3923370


>gb|CP000446.1| Shewanella sp. MR-4, complete genome
Length=4706287

 Features flanking this part of subject sequence:
   127 bp at 5' side: methylation site containing protein
   72 bp at 3' side: conserved hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  43      GCTGTTGAATTTTCACTCA  61
               |||||||||||||||||||
Sbjct  822963  GCTGTTGAATTTTCACTCA  822945


>gb|AC189703.2| Pan troglodytes BAC clone CH251-98C24 from chromosome 7, complete 
sequence
Length=153040

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  51      ATTTTCACTCAACCCCCTC  69
               |||||||||||||||||||
Sbjct  142544  ATTTTCACTCAACCCCCTC  142526


>gb|AY543166.1| Pennisetum mosaic virus polyprotein gene, partial cds
Length=909

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGA  32
            |||||||||||||| ||||||||
Sbjct  487  AATGGAGTGTGGACAATGATGGA  509


>gb|AY172336.1| Pennisetum mosaic virus polyprotein gene, partial cds
Length=1669

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||||||||| ||||||||
Sbjct  1006  AATGGAGTGTGGACAATGATGGA  1028


>gb|AF543212.1| Potato virus A isolate U infectious clone 1, complete genome
Length=9598

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||| ||||||||||||||
Sbjct  8922  AATGGAGTTTGGACCATGATGGA  8944


>gb|AC096551.1| Homo sapiens BAC clone RP11-22K23 from 7, complete sequence
Length=149656

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  51     ATTTTCACTCAACCCCCTC  69
              |||||||||||||||||||
Sbjct  37195  ATTTTCACTCAACCCCCTC  37213


>gb|AF543709.1| Potato virus A isolate U clone 2, complete genome
Length=9598

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||| ||||||||||||||
Sbjct  8922  AATGGAGTTTGGACCATGATGGA  8944


>gb|AF493948.1| Potato virus A isolate DMSZ coat protein mRNA, partial cds
Length=807

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGA  32
            |||||||| ||||||||||||||
Sbjct  391  AATGGAGTTTGGACCATGATGGA  413


>gb|AE008847.1| Salmonella typhimurium LT2, section 151 of 220 of the complete 
genome
Length=20604

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  77    ACCGCAAACCCCCGCTCCTGGCG  99
             ||||||||||||||| |||||||
Sbjct  7092  ACCGCAAACCCCCGCCCCTGGCG  7114


>emb|X59985.1|PVACOATM Potato virus A RNA 3'-terminal for coat protein and polymerase
Length=1383

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10   AATGGAGTGTGGACCATGATGGA  32
            |||||||| ||||||||||||||
Sbjct  762  AATGGAGTTTGGACCATGATGGA  784


>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence
Length=115335

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  41     AAGCTGTTGAATTTTCACTCAAC  63
              ||||||||||||| |||||||||
Sbjct  33240  AAGCTGTTGAATTCTCACTCAAC  33262


>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence
Length=181756

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  43      GCTGTTGAATTTTCACTCA  61
               |||||||||||||||||||
Sbjct  146621  GCTGTTGAATTTTCACTCA  146639


>gb|S51667.1| polyprotein [potato virus A PVA, Genomic RNA, 2597 nt]
Length=2597

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||| ||||||||||||||
Sbjct  1951  AATGGAGTTTGGACCATGATGGA  1973


>gb|AF305545.1|AF305545 Moroccan watermelon mosaic virus polyprotein gene, partial cds
Length=1693

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||| ||||||||||||||
Sbjct  1078  AATGGAGTTTGGACCATGATGGA  1100


>emb|Z21670.1|PVCGA Potato virus A complete genome
Length=9585

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  10    AATGGAGTGTGGACCATGATGGA  32
             |||||||| ||||||||||||||
Sbjct  8922  AATGGAGTTTGGACCATGATGGA  8944



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1711421
Number of extensions: 84070
Number of successful extensions: 22573
Number of sequences better than 10: 5
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 22573
Number of HSP's successfully gapped: 5
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY5YGVSJ016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|430-528
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   188    3e-45
gb|CP000880.1|  Salmonella enterica subsp. arizonae serovar 62...  38.2    5.9  
emb|AM429800.2|  Vitis vinifera contig VV78X143458.7, whole ge...  38.2    5.9  
gb|AC193021.3|  Pan troglodytes BAC clone CH251-497K18 from ch...  38.2    5.9  
gb|CP000444.1|  Shewanella sp. MR-7, complete genome               38.2    5.9  
gb|CP000446.1|  Shewanella sp. MR-4, complete genome               38.2    5.9  
gb|AC189703.2|  Pan troglodytes BAC clone CH251-98C24 from chr...  38.2    5.9  
gb|AC096551.1|  Homo sapiens BAC clone RP11-22K23 from 7, comp...  38.2    5.9  
gb|AE008847.1|  Salmonella typhimurium LT2, section 151 of 220...  38.2    5.9  
gb|AC093811.3|  Homo sapiens BAC clone RP11-355H11 from 4, com...  38.2    5.9  
gb|AC097714.3|  Homo sapiens BAC clone RP11-324H7 from 4, comp...  38.2    5.9  
emb|AL627278.1|  Salmonella enterica serovar Typhi (Salmonella...  38.2    5.9  
gb|CP000026.1|  Salmonella enterica subsp. enterica serovar Pa...  38.2    5.9  
gb|AE014613.1|  Salmonella enterica subsp. enterica serovar Ty...  38.2    5.9  
gb|AE017220.1|  Salmonella enterica subsp. enterica serovar Ch...  38.2    5.9  
gb|AC131739.3|  Mus musculus BAC clone RP23-97B15 from 13, com...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTTGGATACCGCAAACCCCCGCTC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  430  GGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTTGGATACCGCAAACCCCCGCTC  489

Query  61   CTWGCGATTATGCACCTCTTCTCAAACGCCCCGGAAGCG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  490  CTGGCGATTATGCACCTCTTCTCAAACGCCCCGGAAGCG  528


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTTGGATACCGCAAACCCCCGCTC  60
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  430  GGGGATCAAGCTGTTGAATTTTCACTCAACCCCCTCGTTGGATACTGCAAACCCCCGCTC  489

Query  61   CTGGCGATTATGCACCTCTTCTCAAACGCCCCGGAAGCG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  490  CTGGCGATTATGCACCTCTTCTCAAACGCCCCGGAAGCG  528


>gb|CP000880.1| Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete 
genome
Length=4600800

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  44       ACCGCAAACCCCCGCTCCTGGCG  66
                ||||||||||||||| |||||||
Sbjct  4346153  ACCGCAAACCCCCGCCCCTGGCG  4346131


>emb|AM429800.2| Vitis vinifera contig VV78X143458.7, whole genome shotgun sequence
Length=21590

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  17     AATTTTCACTCAACCCCCT  35
              |||||||||||||||||||
Sbjct  10456  AATTTTCACTCAACCCCCT  10438


>gb|AC193021.3| Pan troglodytes BAC clone CH251-497K18 from chromosome 7, complete 
sequence
Length=192184

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  18      ATTTTCACTCAACCCCCTC  36
               |||||||||||||||||||
Sbjct  177023  ATTTTCACTCAACCCCCTC  177041


>gb|CP000444.1| Shewanella sp. MR-7, complete genome
Length=4792610

 Features flanking this part of subject sequence:
   72 bp at 5' side: conserved hypothetical protein
   127 bp at 3' side: methylation site containing protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  10       GCTGTTGAATTTTCACTCA  28
                |||||||||||||||||||
Sbjct  3923352  GCTGTTGAATTTTCACTCA  3923370


>gb|CP000446.1| Shewanella sp. MR-4, complete genome
Length=4706287

 Features flanking this part of subject sequence:
   127 bp at 5' side: methylation site containing protein
   72 bp at 3' side: conserved hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  10      GCTGTTGAATTTTCACTCA  28
               |||||||||||||||||||
Sbjct  822963  GCTGTTGAATTTTCACTCA  822945


>gb|AC189703.2| Pan troglodytes BAC clone CH251-98C24 from chromosome 7, complete 
sequence
Length=153040

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  18      ATTTTCACTCAACCCCCTC  36
               |||||||||||||||||||
Sbjct  142544  ATTTTCACTCAACCCCCTC  142526


>gb|AC096551.1| Homo sapiens BAC clone RP11-22K23 from 7, complete sequence
Length=149656

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  18     ATTTTCACTCAACCCCCTC  36
              |||||||||||||||||||
Sbjct  37195  ATTTTCACTCAACCCCCTC  37213


>gb|AE008847.1| Salmonella typhimurium LT2, section 151 of 220 of the complete 
genome
Length=20604

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  44    ACCGCAAACCCCCGCTCCTGGCG  66
             ||||||||||||||| |||||||
Sbjct  7092  ACCGCAAACCCCCGCCCCTGGCG  7114


>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence
Length=115335

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  8      AAGCTGTTGAATTTTCACTCAAC  30
              ||||||||||||| |||||||||
Sbjct  33240  AAGCTGTTGAATTCTCACTCAAC  33262


>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence
Length=181756

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  10      GCTGTTGAATTTTCACTCA  28
               |||||||||||||||||||
Sbjct  146621  GCTGTTGAATTTTCACTCA  146639


>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, 
complete chromosome; segment 14/20
Length=258050

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  44     ACCGCAAACCCCCGCTCCTGGCG  66
              ||||||||||||||| |||||||
Sbjct  16328  ACCGCAAACCCCCGCCCCTGGCG  16350


>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. 
ATCC 9150
Length=4585229

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  44       ACCGCAAACCCCCGCTCCTGGCG  66
                ||||||||||||||| |||||||
Sbjct  3175286  ACCGCAAACCCCCGCCCCTGGCG  3175308


>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete 
genome
Length=4791961

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  44       ACCGCAAACCCCCGCTCCTGGCG  66
                ||||||||||||||| |||||||
Sbjct  3207823  ACCGCAAACCCCCGCCCCTGGCG  3207845


>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. 
SC-B67, complete genome
Length=4755700

 Features in this part of subject sequence:
   adenylyl transferase for glutamine synthetase, regulates ...

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  44       ACCGCAAACCCCCGCTCCTGGCG  66
                ||||||||||||||| |||||||
Sbjct  3326902  ACCGCAAACCCCCGCCCCTGGCG  3326924


>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence
Length=241046

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  2      GGGATCAAGCTGTTGAATTTTCA  24
              ||||||||||||| |||||||||
Sbjct  37720  GGGATCAAGCTGTAGAATTTTCA  37698



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1486460
Number of extensions: 65008
Number of successful extensions: 15651
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 15651
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY620H7Y014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|463-561
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   188    3e-45
emb|AL021531.1|FR151J19  Fugu rubripes cosmid 151J19 covering ...  42.1    0.38 
ref|XM_001381076.1|  PREDICTED: Monodelphis domestica similar ...  40.1    1.5  
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  40.1    1.5  
gb|AC114933.2|  Homo sapiens chromosome 5 clone CTD-2023M8, co...  40.1    1.5  
gb|AC026722.4|AC026722  Homo sapiens chromosome 5 clone CTD-22...  40.1    1.5  
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  38.2    5.9  
gb|CP000880.1|  Salmonella enterica subsp. arizonae serovar 62...  38.2    5.9  
gb|AC092710.7|  Mus musculus chromosome 13, clone RP23-5A19, c...  38.2    5.9  
dbj|AB268588.1|  Gallus gallus genes, MHC region, partial and ...  38.2    5.9  
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  38.2    5.9  
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  38.2    5.9  
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  38.2    5.9  
gb|AE008847.1|  Salmonella typhimurium LT2, section 151 of 220...  38.2    5.9  
gb|AC108162.4|  Homo sapiens BAC clone RP11-686G17 from 4, com...  38.2    5.9  
emb|AL627278.1|  Salmonella enterica serovar Typhi (Salmonella...  38.2    5.9  
gb|AC084724.6|  Homo sapiens BAC clone RP11-613O14 from 4, com...  38.2    5.9  
gb|CP000026.1|  Salmonella enterica subsp. enterica serovar Pa...  38.2    5.9  
gb|AE014613.1|  Salmonella enterica subsp. enterica serovar Ty...  38.2    5.9  
gb|AE017220.1|  Salmonella enterica subsp. enterica serovar Ch...  38.2    5.9  
gb|AC006238.1|AC006238  Homo sapiens chromosome 18, clone hRPK...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGTTGGATACCGCAAACCCCCGCTCCTGGCGATTATGCACCTCTTCTCAAACGCCCCG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  463  CTCGTTGGATACCGCAAACCCCCGCTCCTGGCGATTATGCACCTCTTCTCAAACGCCCCG  522

Query  61   GAAGCGTATTTGGAGATGGGGAATTCTGGAAGGCTTTTA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  523  GAAGCGTATTTGGAGATGGGGAATTCTGGAAGGCTTTTA  561


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGTTGGATACCGCAAACCCCCGCTCCTGGCGATTATGCACCTCTTCTCAAACGCCCCG  60
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  463  CTCGTTGGATACTGCAAACCCCCGCTCCTGGCGATTATGCACCTCTTCTCAAACGCCCCG  522

Query  61   GAAGCGTATTTGGAGATGGGGAATTCTGGAAGGCTTTTA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  523  GAAGCGTATTTGGAGATGGGGAATTCTGGAAGGCTTTTA  561


>emb|AL021531.1|FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin 
and PAX6 genes
Length=45565

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  78    GGGGAATTCTGGAAGGCTTTT  98
             |||||||||||||||||||||
Sbjct  3394  GGGGAATTCTGGAAGGCTTTT  3374


>ref|XM_001381076.1| PREDICTED: Monodelphis domestica similar to KIAA0316 protein 
(LOC100031992), mRNA
Length=4344

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  69    TTTGGAGATGGGGAATTCTG  88
             ||||||||||||||||||||
Sbjct  3243  TTTGGAGATGGGGAATTCTG  3224


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 47/56 (83%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  33    GATTATGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  88
             ||||||||||| ||||||| ||||  | ||||||||| | |||||| | |||||||
Sbjct  1122  GATTATGCACCACTTCTCAGACGCAGCTGAAGCGTATATTGAGATGAGAAATTCTG  1177


>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
Length=177958

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  66     GTATTTGGAGATGGGGAATT  85
              ||||||||||||||||||||
Sbjct  45951  GTATTTGGAGATGGGGAATT  45932


>gb|AC026722.4|AC026722 Homo sapiens chromosome 5 clone CTD-2203N22, complete sequence
Length=150162

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  66    GTATTTGGAGATGGGGAATT  85
             ||||||||||||||||||||
Sbjct  8303  GTATTTGGAGATGGGGAATT  8322


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  38    TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  88
             |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  960   TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  1010


>gb|CP000880.1| Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete 
genome
Length=4600800

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  11       ACCGCAAACCCCCGCTCCTGGCG  33
                ||||||||||||||| |||||||
Sbjct  4346153  ACCGCAAACCCCCGCCCCTGGCG  4346131


>gb|AC092710.7| Mus musculus chromosome 13, clone RP23-5A19, complete sequence
Length=198577

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  67     TATTTGGAGATGGGGAATT  85
              |||||||||||||||||||
Sbjct  87347  TATTTGGAGATGGGGAATT  87329


>dbj|AB268588.1| Gallus gallus genes, MHC region, partial and complete cds
Length=241833

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  69     TTTGGAGATGGGGAATTCTGGAA  91
              |||||| ||||||||||||||||
Sbjct  41002  TTTGGAAATGGGGAATTCTGGAA  40980


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  38   TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  88
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  38   TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  88
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  38   TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  88
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|AE008847.1| Salmonella typhimurium LT2, section 151 of 220 of the complete 
genome
Length=20604

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  11    ACCGCAAACCCCCGCTCCTGGCG  33
             ||||||||||||||| |||||||
Sbjct  7092  ACCGCAAACCCCCGCCCCTGGCG  7114


>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence
Length=185624

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  66      GTATTTGGAGATGGGGAAT  84
               |||||||||||||||||||
Sbjct  155670  GTATTTGGAGATGGGGAAT  155652


>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, 
complete chromosome; segment 14/20
Length=258050

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  11     ACCGCAAACCCCCGCTCCTGGCG  33
              ||||||||||||||| |||||||
Sbjct  16328  ACCGCAAACCCCCGCCCCTGGCG  16350


>gb|AC084724.6| Homo sapiens BAC clone RP11-613O14 from 4, complete sequence
Length=172647

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 28/31 (90%), Gaps = 0/31 (0%)
 Strand=Plus/Minus

Query  69      TTTGGAGATGGGGAATTCTGGAAGGCTTTTA  99
               ||||||||||||||||| | ||||| |||||
Sbjct  122723  TTTGGAGATGGGGAATTGTTGAAGGATTTTA  122693


>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. 
ATCC 9150
Length=4585229

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  11       ACCGCAAACCCCCGCTCCTGGCG  33
                ||||||||||||||| |||||||
Sbjct  3175286  ACCGCAAACCCCCGCCCCTGGCG  3175308


>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete 
genome
Length=4791961

 Features in this part of subject sequence:
   adenyl-transferase

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  11       ACCGCAAACCCCCGCTCCTGGCG  33
                ||||||||||||||| |||||||
Sbjct  3207823  ACCGCAAACCCCCGCCCCTGGCG  3207845


>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. 
SC-B67, complete genome
Length=4755700

 Features in this part of subject sequence:
   adenylyl transferase for glutamine synthetase, regulates ...

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  11       ACCGCAAACCCCCGCTCCTGGCG  33
                ||||||||||||||| |||||||
Sbjct  3326902  ACCGCAAACCCCCGCCCCTGGCG  3326924


>gb|AC006238.1|AC006238 Homo sapiens chromosome 18, clone hRPK.474_N_24, complete sequence
Length=211945

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  70      TTGGAGATGGGGAATTCTG  88
               |||||||||||||||||||
Sbjct  152298  TTGGAGATGGGGAATTCTG  152280



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 16923538
Number of extensions: 800050
Number of successful extensions: 194063
Number of sequences better than 10: 22
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 194063
Number of HSP's successfully gapped: 22
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY6W2610016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|496-594
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   192    2e-46
gb|EF444945.1|  Homo sapiens junctional adhesion molecule-like...  46.1    0.024
ref|XM_001160114.1|  PREDICTED: Pan troglodytes hypothetical p...  46.1    0.024
gb|BC008810.2|  Homo sapiens hypothetical protein LOC196264, m...  46.1    0.024
dbj|AK095399.1|  Homo sapiens cDNA FLJ38080 fis, clone CTONG20...  46.1    0.024
emb|CR859133.1|  Pongo pygmaeus mRNA; cDNA DKFZp459M1329 (from...  46.1    0.024
dbj|AP002800.4|  Homo sapiens genomic DNA, chromosome 11 clone...  46.1    0.024
emb|AL021531.1|FR151J19  Fugu rubripes cosmid 151J19 covering ...  42.1    0.38 
ref|NM_001098051.1|  Bos taurus myelin protein zero-like 3 (MP...  40.1    1.5  
ref|XM_001381076.1|  PREDICTED: Monodelphis domestica similar ...  40.1    1.5  
gb|AC194783.3|  Rhesus Macaque  BAC CH250-375H14 () complete s...  40.1    1.5  
gb|AC190221.3|  Pan troglodytes BAC clone CH251-697F15 from ch...  40.1    1.5  
ref|XM_001096649.1|  PREDICTED: Macaca mulatta similar to Myel...  40.1    1.5  
gb|AC146437.3|  Pan troglodytes BAC clone RP43-15J3 from chrom...  40.1    1.5  
gb|AC114933.2|  Homo sapiens chromosome 5 clone CTD-2023M8, co...  40.1    1.5  
gb|AC084724.6|  Homo sapiens BAC clone RP11-613O14 from 4, com...  40.1    1.5  
gb|AC026722.4|AC026722  Homo sapiens chromosome 5 clone CTD-22...  40.1    1.5  
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  38.2    5.9  
gb|AC092710.7|  Mus musculus chromosome 13, clone RP23-5A19, c...  38.2    5.9  
dbj|AB268588.1|  Gallus gallus genes, MHC region, partial and ...  38.2    5.9  
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  38.2    5.9  
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  38.2    5.9  
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  38.2    5.9  
gb|AC108162.4|  Homo sapiens BAC clone RP11-686G17 from 4, com...  38.2    5.9  
gb|AC013439.11|  Homo sapiens BAC clone RP11-270G18 from 2, co...  38.2    5.9  
gb|AC006238.1|AC006238  Homo sapiens chromosome 18, clone hRPK...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATTATGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTGGAAGG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  ATTATGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTGGAAGG  555

Query  61   CTTTTAACCCCCCGGTCCGGACTGCTAGGAAATTTAAAA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  556  CTTTTAACCCCCCGGTCCGGACTGCTAGGAAATTTAAAA  594


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  192 bits (97),  Expect = 2e-46
 Identities = 97/97 (100%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    ATTATGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTGGAAGG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  ATTATGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTGGAAGG  555

Query  61   CTTTTAACCCCCCGGTCCGGACTGCTAGGAAATTTAA  97
            |||||||||||||||||||||||||||||||||||||
Sbjct  556  CTTTTAACCCCCCGGTCCGGACTGCTAGGAAATTTAA  592


>gb|EF444945.1| Homo sapiens junctional adhesion molecule-like precursor (AMICA1) 
gene, complete cds, alternatively spliced
Length=37036

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  49     AATTCTGGAAGGCTTTTAACCCC  71
              |||||||||||||||||||||||
Sbjct  36280  AATTCTGGAAGGCTTTTAACCCC  36302


>ref|XM_001160114.1| PREDICTED: Pan troglodytes hypothetical protein LOC742233 (LOC742233), 
mRNA
Length=3953

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  49    AATTCTGGAAGGCTTTTAACCCC  71
             |||||||||||||||||||||||
Sbjct  3401  AATTCTGGAAGGCTTTTAACCCC  3379


>gb|BC008810.2| Homo sapiens hypothetical protein LOC196264, mRNA (cDNA clone 
IMAGE:3948909), partial cds
Length=3587

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  49    AATTCTGGAAGGCTTTTAACCCC  71
             |||||||||||||||||||||||
Sbjct  3009  AATTCTGGAAGGCTTTTAACCCC  2987


>dbj|AK095399.1| Homo sapiens cDNA FLJ38080 fis, clone CTONG2016185
Length=3921

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  49    AATTCTGGAAGGCTTTTAACCCC  71
             |||||||||||||||||||||||
Sbjct  3373  AATTCTGGAAGGCTTTTAACCCC  3351


>emb|CR859133.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1329 (from clone DKFZp459M1329)
Length=3713

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  49    AATTCTGGAAGGCTTTTAACCCC  71
             |||||||||||||||||||||||
Sbjct  3141  AATTCTGGAAGGCTTTTAACCCC  3119


>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete 
sequence
Length=215441

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  49      AATTCTGGAAGGCTTTTAACCCC  71
               |||||||||||||||||||||||
Sbjct  149842  AATTCTGGAAGGCTTTTAACCCC  149864


>emb|AL021531.1|FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin 
and PAX6 genes
Length=45565

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  45    GGGGAATTCTGGAAGGCTTTT  65
             |||||||||||||||||||||
Sbjct  3394  GGGGAATTCTGGAAGGCTTTT  3374


>ref|NM_001098051.1| Bos taurus myelin protein zero-like 3 (MPZL3), mRNA
 gb|BC140504.1| Bos taurus similar to QQRG2966, mRNA (cDNA clone MGC:139235 IMAGE:8204274), 
complete cds
Length=3569

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  49    AATTCTGGAAGGCTTTTAACCCCC  72
             ||||||| ||||||||||||||||
Sbjct  3016  AATTCTGAAAGGCTTTTAACCCCC  2993


>ref|XM_001381076.1| PREDICTED: Monodelphis domestica similar to KIAA0316 protein 
(LOC100031992), mRNA
Length=4344

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  36    TTTGGAGATGGGGAATTCTG  55
             ||||||||||||||||||||
Sbjct  3243  TTTGGAGATGGGGAATTCTG  3224


>gb|AC194783.3| Rhesus Macaque  BAC CH250-375H14 () complete sequence
Length=158273

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  52     TCTGGAAGGCTTTTAACCCC  71
              ||||||||||||||||||||
Sbjct  40990  TCTGGAAGGCTTTTAACCCC  41009


>gb|AC190221.3| Pan troglodytes BAC clone CH251-697F15 from chromosome 7, complete 
sequence
Length=174215

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  80      GACTGCTAGGAAATTTAAAA  99
               ||||||||||||||||||||
Sbjct  166994  GACTGCTAGGAAATTTAAAA  167013


>ref|XM_001096649.1| PREDICTED: Macaca mulatta similar to Myelin P0 protein precursor 
(Myelin protein zero) (Myelin peripheral protein) (MPP) 
(LOC699211), mRNA
Length=3933

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  52    TCTGGAAGGCTTTTAACCCC  71
             ||||||||||||||||||||
Sbjct  3381  TCTGGAAGGCTTTTAACCCC  3362


>gb|AC146437.3| Pan troglodytes BAC clone RP43-15J3 from chromosome 7, complete 
sequence
Length=163637

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  80      GACTGCTAGGAAATTTAAAA  99
               ||||||||||||||||||||
Sbjct  139698  GACTGCTAGGAAATTTAAAA  139679


>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
Length=177958

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  33     GTATTTGGAGATGGGGAATT  52
              ||||||||||||||||||||
Sbjct  45951  GTATTTGGAGATGGGGAATT  45932


>gb|AC084724.6| Homo sapiens BAC clone RP11-613O14 from 4, complete sequence
Length=172647

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 29/32 (90%), Gaps = 0/32 (0%)
 Strand=Plus/Minus

Query  36      TTTGGAGATGGGGAATTCTGGAAGGCTTTTAA  67
               ||||||||||||||||| | ||||| ||||||
Sbjct  122723  TTTGGAGATGGGGAATTGTTGAAGGATTTTAA  122692


>gb|AC026722.4|AC026722 Homo sapiens chromosome 5 clone CTD-2203N22, complete sequence
Length=150162

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  33    GTATTTGGAGATGGGGAATT  52
             ||||||||||||||||||||
Sbjct  8303  GTATTTGGAGATGGGGAATT  8322


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  5     TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  55
             |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  960   TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  1010


>gb|AC092710.7| Mus musculus chromosome 13, clone RP23-5A19, complete sequence
Length=198577

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  34     TATTTGGAGATGGGGAATT  52
              |||||||||||||||||||
Sbjct  87347  TATTTGGAGATGGGGAATT  87329


>dbj|AB268588.1| Gallus gallus genes, MHC region, partial and complete cds
Length=241833

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  36     TTTGGAGATGGGGAATTCTGGAA  58
              |||||| ||||||||||||||||
Sbjct  41002  TTTGGAAATGGGGAATTCTGGAA  40980


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  5    TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  55
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  5    TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  55
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  5    TGCACCTCTTCTCAAACGCCCCGGAAGCGTATTTGGAGATGGGGAATTCTG  55
            |||||| ||||||||||||  | ||||||| ||| |||||| | |||||||
Sbjct  500  TGCACCACTTCTCAAACGCAGCTGAAGCGTTTTTTGAGATGAGAAATTCTG  550


>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence
Length=185624

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  33      GTATTTGGAGATGGGGAAT  51
               |||||||||||||||||||
Sbjct  155670  GTATTTGGAGATGGGGAAT  155652


>gb|AC013439.11| Homo sapiens BAC clone RP11-270G18 from 2, complete sequence
Length=167891

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  81      ACTGCTAGGAAATTTAAAA  99
               |||||||||||||||||||
Sbjct  132732  ACTGCTAGGAAATTTAAAA  132714


>gb|AC006238.1|AC006238 Homo sapiens chromosome 18, clone hRPK.474_N_24, complete sequence
Length=211945

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  37      TTGGAGATGGGGAATTCTG  55
               |||||||||||||||||||
Sbjct  152298  TTGGAGATGGGGAATTCTG  152280



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1922217
Number of extensions: 114047
Number of successful extensions: 21911
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 21911
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY6XTDVG016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|529-627
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   188    3e-45
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...  77.8    7e-12
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  77.8    7e-12
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...  75.8    3e-11
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...  75.8    3e-11
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...  75.8    3e-11
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...  75.8    3e-11
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...  73.8    1e-10
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...  67.9    7e-09
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...  67.9    7e-09
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...  67.9    7e-09
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...  67.9    7e-09
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...  65.9    3e-08
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...  65.9    3e-08
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...  65.9    3e-08
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...  65.9    3e-08
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...  65.9    3e-08
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...  65.9    3e-08
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...  63.9    1e-07
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...  60.0    2e-06
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...  60.0    2e-06
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  54.0    1e-04
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  52.0    4e-04
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  52.0    4e-04
gb|EF444945.1|  Homo sapiens junctional adhesion molecule-like...  46.1    0.024
ref|XM_001160114.1|  PREDICTED: Pan troglodytes hypothetical p...  46.1    0.024
gb|BC008810.2|  Homo sapiens hypothetical protein LOC196264, m...  46.1    0.024
dbj|AK095399.1|  Homo sapiens cDNA FLJ38080 fis, clone CTONG20...  46.1    0.024
emb|CR859133.1|  Pongo pygmaeus mRNA; cDNA DKFZp459M1329 (from...  46.1    0.024
emb|AJ421466.1|SMO421466  Sugarcane mosaic virus genomic RNA f...  46.1    0.024
emb|AJ421465.1|SMO421465  Sugarcane mosaic virus genomic RNA f...  46.1    0.024
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  46.1    0.024
dbj|AP002800.4|  Homo sapiens genomic DNA, chromosome 11 clone...  46.1    0.024
gb|EF547367.1|  South African passiflora virus polyprotein gen...  44.1    0.095
gb|AY434733.1|  Sugarcane mosaic virus isolate 904 polyprotein...  44.1    0.095
gb|AY434732.1|  Sugarcane mosaic virus isolate 543 polyprotein...  44.1    0.095
gb|AY434731.1|  Sugarcane mosaic virus isolate 515.3 polyprote...  44.1    0.095
gb|AY222743.1|  Sugarcane mosaic virus polyprotein gene, parti...  44.1    0.095
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  44.1    0.095
gb|AY974328.1|  Omphalodes virus Y polyprotein gene, partial cds   44.1    0.095
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  44.1    0.095
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  44.1    0.095
emb|AL021531.1|FR151J19  Fugu rubripes cosmid 151J19 covering ...  42.1    0.38 
gb|AC013439.11|  Homo sapiens BAC clone RP11-270G18 from 2, co...  42.1    0.38 
gb|EF579955.1|  Moroccan watermelon mosaic virus isolate TN05-...  40.1    1.5  
ref|NM_001098051.1|  Bos taurus myelin protein zero-like 3 (MP...  40.1    1.5  
ref|XM_001381076.1|  PREDICTED: Monodelphis domestica similar ...  40.1    1.5  
gb|AC194783.3|  Rhesus Macaque  BAC CH250-375H14 () complete s...  40.1    1.5  
gb|AC190221.3|  Pan troglodytes BAC clone CH251-697F15 from ch...  40.1    1.5  
ref|XM_001096649.1|  PREDICTED: Macaca mulatta similar to Myel...  40.1    1.5  
gb|AC146437.3|  Pan troglodytes BAC clone RP43-15J3 from chrom...  40.1    1.5  
gb|AC084724.6|  Homo sapiens BAC clone RP11-613O14 from 4, com...  40.1    1.5  
gb|AC105042.7|  Homo sapiens chromosome 18, clone CTD-2544E12,...  40.1    1.5  
gb|AC092710.7|  Mus musculus chromosome 13, clone RP23-5A19, c...  38.2    5.9  
dbj|AB268588.1|  Gallus gallus genes, MHC region, partial and ...  38.2    5.9  
gb|DQ846832.1|  Sugarcane mosaic virus isolate Shaanxi polypro...  38.2    5.9  
gb|AC112962.15|  Mus musculus chromosome 19, clone RP24-74N6, ...  38.2    5.9  
gb|AY042184.1|  Sugarcane mosaic virus isolate Beijing, comple...  38.2    5.9  
gb|AC093363.12|  Mus musculus chromosome 7, clone RP23-60O3, c...  38.2    5.9  
gb|AY660663.1|  Maize dwarf mosaic virus isolate Hebei coat pr...  38.2    5.9  
gb|AY639645.1|  Sugarcane mosaic virus polyprotein gene, parti...  38.2    5.9  
gb|AY149118.1|  Sugarcane mosaic virus isolate SCMV-SD, comple...  38.2    5.9  
gb|AF494510.1|  Sugarcane mosaic virus, complete genome            38.2    5.9  
gb|AF540989.1|  Maize dwarf mosaic virus coat protein (CP) mRN...  38.2    5.9  
gb|AC166100.2|  Mus musculus BAC clone RP24-64H18 from chromos...  38.2    5.9  
gb|AC114933.2|  Homo sapiens chromosome 5 clone CTD-2023M8, co...  38.2    5.9  
gb|AE015928.1|  Bacteroides thetaiotaomicron VPI-5482, complet...  38.2    5.9  
dbj|AP001724.1|  Homo sapiens genomic DNA, chromosome 21q, sec...  38.2    5.9  
gb|AC022313.5|  Homo sapiens BAC clone RP11-437G1 from 4, comp...  38.2    5.9  
gb|S77088.1|  Maize dwarf mosaic virus polyprotein gene, parti...  38.2    5.9  
emb|AJ310105.1|SMO310105  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ297628.1|SMO297628  Sugarcane mosaic virus genomic RNA, ...  38.2    5.9  
gb|AF020803.2|AF020803  Homo sapiens chromosome 21 clone cosmi...  38.2    5.9  
gb|AF015720.2|AF015720  Homo sapiens chromosome 21 clone PAC c...  38.2    5.9  
gb|AY569692.1|  Sugarcane mosaic virus isolate SCMV-SX, comple...  38.2    5.9  
gb|AC026722.4|AC026722  Homo sapiens chromosome 5 clone CTD-22...  38.2    5.9  
gb|AC116863.6|  Mus musculus chromosome 19, clone RP24-408G9, ...  38.2    5.9  
emb|AJ421464.1|SMO421464  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421463.1|SMO421463  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421461.1|SMO421461  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421460.1|SMO421460  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421459.1|SMO421459  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421458.1|SMO421458  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421457.1|SMO421457  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ421456.1|SMO421456  Sugarcane mosaic virus genomic RNA f...  38.2    5.9  
emb|AJ310110.1|SMO310110  Sugarcane mosaic virus partial genom...  38.2    5.9  
emb|AJ310109.1|SMO310109  Sugarcane mosaic virus partial genom...  38.2    5.9  
emb|AJ271085.1|SMO271085  Sugarcane mosaic virus partial genom...  38.2    5.9  
emb|AJ229041.1|HS229041  Homo sapiens 959 kb contig between AM...  38.2    5.9  
gb|AC174642.2|  Mus musculus BAC clone RP24-362N12 from chromo...  38.2    5.9  
gb|AC006238.1|AC006238  Homo sapiens chromosome 18, clone hRPK...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATTTGGAGATGGGGAATTCTGGAAGGCTTTTAACCCCCCGGTCCGGACTGCTAGGAAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  TATTTGGAGATGGGGAATTCTGGAAGGCTTTTAACCCCCCGGTCCGGACTGCTAGGAAAT  588

Query  61   TTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  589  TTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATTTGGAGATGGGGAATTCTGGAAGGCTTTTAACCCCCCGGTCCGGACTGCTAGGAAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  TATTTGGAGATGGGGAATTCTGGAAGGCTTTTAACCCCCCGGTCCGGACTGCTAGGAAAT  588

Query  61   TTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            |||| ||||||||||||||||||||||||||||||||||
Sbjct  589  TTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 51/55 (92%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  45   CGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            |||||||||  | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  573  CGGACTGCTGAGGAATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 51/55 (92%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  45   CGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            |||||||||  | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  585  CGGACTGCTGAGGAATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  639


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 41/42 (97%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 41/42 (97%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 41/42 (97%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 41/42 (97%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  627


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 40/41 (97%), Gaps = 0/41 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            ||||||| |||||||||||||||||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  626


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 43/46 (93%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  54   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTC  627


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 43/46 (93%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  54   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTC  627


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 43/46 (93%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  54   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTC  627


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score = 67.9 bits (34),  Expect = 7e-09
 Identities = 40/42 (95%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58    AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
             ||||||| ||| ||||||||||||||||||||||||||||||
Sbjct  1213  AATTTAAGAGATAAGAGCTTAGCAAGGTATGCTTTCGATTTC  1254


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  594  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  626


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  594  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  626


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  629


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  622  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  654


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  629


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 33/33 (100%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  66   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||||||||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTT  629


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 38/40 (95%), Gaps = 0/40 (0%)
 Strand=Plus/Plus

Query  60    TTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
             |||||||| ||||||||| |||||||||||||||||||||
Sbjct  1048  TTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTC  1087


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score = 60.0 bits (30),  Expect = 2e-06
 Identities = 39/42 (92%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct  614  AATTTAAGAGACAAGAGCTTGGCAAGGTACGCTTTCGATTTC  655


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score = 60.0 bits (30),  Expect = 2e-06
 Identities = 39/42 (92%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||| ||| |||||||| |||||||||||||||||||||
Sbjct  829  AATTTAAGAGATAAGAGCTTGGCAAGGTATGCTTTCGATTTC  870


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 33/35 (94%), Gaps = 0/35 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTT  92
            |||||||  ||||||||||||||||||||||||||
Sbjct  778  AATTTAAGGGACAAGAGCTTAGCAAGGTATGCTTT  812


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 35/38 (92%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  58    AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGA  95
             |||||||  ||||||||||| |||||||||||||||||
Sbjct  8995  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTTCGA  9032


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 35/38 (92%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGA  95
            |||||||  ||||||||||| |||||||||||||||||
Sbjct  751  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTTCGA  788


>gb|EF444945.1| Homo sapiens junctional adhesion molecule-like precursor (AMICA1) 
gene, complete cds, alternatively spliced
Length=37036

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  16     AATTCTGGAAGGCTTTTAACCCC  38
              |||||||||||||||||||||||
Sbjct  36280  AATTCTGGAAGGCTTTTAACCCC  36302


>ref|XM_001160114.1| PREDICTED: Pan troglodytes hypothetical protein LOC742233 (LOC742233), 
mRNA
Length=3953

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  16    AATTCTGGAAGGCTTTTAACCCC  38
             |||||||||||||||||||||||
Sbjct  3401  AATTCTGGAAGGCTTTTAACCCC  3379


>gb|BC008810.2| Homo sapiens hypothetical protein LOC196264, mRNA (cDNA clone 
IMAGE:3948909), partial cds
Length=3587

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  16    AATTCTGGAAGGCTTTTAACCCC  38
             |||||||||||||||||||||||
Sbjct  3009  AATTCTGGAAGGCTTTTAACCCC  2987


>dbj|AK095399.1| Homo sapiens cDNA FLJ38080 fis, clone CTONG2016185
Length=3921

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  16    AATTCTGGAAGGCTTTTAACCCC  38
             |||||||||||||||||||||||
Sbjct  3373  AATTCTGGAAGGCTTTTAACCCC  3351


>emb|CR859133.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1329 (from clone DKFZp459M1329)
Length=3713

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Minus

Query  16    AATTCTGGAAGGCTTTTAACCCC  38
             |||||||||||||||||||||||
Sbjct  3141  AATTCTGGAAGGCTTTTAACCCC  3119


>emb|AJ421466.1|SMO421466 Sugarcane mosaic virus genomic RNA for partial polyprotein gene, 
isolate ZJ2
Length=802

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  73   AGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||||| |||||||||||||||||
Sbjct  628  AGCTTAGCACGGTATGCTTTCGATTTC  654


>emb|AJ421465.1|SMO421465 Sugarcane mosaic virus genomic RNA for partial polyprotein gene, 
isolate ZJ1
Length=802

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 26/27 (96%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  73   AGCTTAGCAAGGTATGCTTTCGATTTC  99
            ||||||||| |||||||||||||||||
Sbjct  628  AGCTTAGCACGGTATGCTTTCGATTTC  654


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 32/35 (91%), Gaps = 0/35 (0%)
 Strand=Plus/Plus

Query  58   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTT  92
            |||||||  ||||||||||| ||||||||||||||
Sbjct  631  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTT  665


>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete 
sequence
Length=215441

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  16      AATTCTGGAAGGCTTTTAACCCC  38
               |||||||||||||||||||||||
Sbjct  149842  AATTCTGGAAGGCTTTTAACCCC  149864


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  70    AAGAGCTTAGCAAGGTATGCTTTCGA  95
             |||||||| |||||||||||||||||
Sbjct  1210  AAGAGCTTGGCAAGGTATGCTTTCGA  1235


>gb|AY434733.1| Sugarcane mosaic virus isolate 904 polyprotein gene, partial 
cds
Length=672

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73   AGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||| |||||
Sbjct  212  AGCTTAGCAAGGTATGCTTTTGATTT  237


>gb|AY434732.1| Sugarcane mosaic virus isolate 543 polyprotein gene, partial 
cds
Length=286

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73   AGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||| |||||
Sbjct  212  AGCTTAGCAAGGTATGCTTTTGATTT  237


>gb|AY434731.1| Sugarcane mosaic virus isolate 515.3 polyprotein gene, partial 
cds
Length=671

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73   AGCTTAGCAAGGTATGCTTTCGATTT  98
            |||||||||||||||||||| |||||
Sbjct  212  AGCTTAGCAAGGTATGCTTTTGATTT  237


>gb|AY222743.1| Sugarcane mosaic virus polyprotein gene, partial cds
Length=2031

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  73    AGCTTAGCAAGGTATGCTTTCGATTT  98
             |||||||||||||||||||| |||||
Sbjct  1571  AGCTTAGCAAGGTATGCTTTTGATTT  1596


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  70   AAGAGCTTAGCAAGGTATGCTTTCGA  95
            |||||||| |||||||||||||||||
Sbjct  949  AAGAGCTTGGCAAGGTATGCTTTCGA  974


>gb|AY974328.1| Omphalodes virus Y polyprotein gene, partial cds
Length=1680

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 22/22 (100%), Gaps = 0/22 (0%)
 Strand=Plus/Plus

Query  77    TAGCAAGGTATGCTTTCGATTT  98
             ||||||||||||||||||||||
Sbjct  1241  TAGCAAGGTATGCTTTCGATTT  1262


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  70   AAGAGCTTAGCAAGGTATGCTTTCGA  95
            |||||||| |||||||||||||||||
Sbjct  838  AAGAGCTTGGCAAGGTATGCTTTCGA  863


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 25/26 (96%), Gaps = 0/26 (0%)
 Strand=Plus/Plus

Query  70   AAGAGCTTAGCAAGGTATGCTTTCGA  95
            |||||||| |||||||||||||||||
Sbjct  949  AAGAGCTTGGCAAGGTATGCTTTCGA  974


>emb|AL021531.1|FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin 
and PAX6 genes
Length=45565

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  12    GGGGAATTCTGGAAGGCTTTT  32
             |||||||||||||||||||||
Sbjct  3394  GGGGAATTCTGGAAGGCTTTT  3374


>gb|AC013439.11| Homo sapiens BAC clone RP11-270G18 from 2, complete sequence
Length=167891

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Minus

Query  48      ACTGCTAGGAAATTTAAAAGA  68
               |||||||||||||||||||||
Sbjct  132732  ACTGCTAGGAAATTTAAAAGA  132712


>gb|EF579955.1| Moroccan watermelon mosaic virus isolate TN05-76, complete genome
Length=9730

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Plus

Query  76    TTAGCAAGGTATGCTTTCGATTTC  99
             ||||| ||||||||||||||||||
Sbjct  9313  TTAGCCAGGTATGCTTTCGATTTC  9336


>ref|NM_001098051.1| Bos taurus myelin protein zero-like 3 (MPZL3), mRNA
 gb|BC140504.1| Bos taurus similar to QQRG2966, mRNA (cDNA clone MGC:139235 IMAGE:8204274), 
complete cds
Length=3569

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 23/24 (95%), Gaps = 0/24 (0%)
 Strand=Plus/Minus

Query  16    AATTCTGGAAGGCTTTTAACCCCC  39
             ||||||| ||||||||||||||||
Sbjct  3016  AATTCTGAAAGGCTTTTAACCCCC  2993


>ref|XM_001381076.1| PREDICTED: Monodelphis domestica similar to KIAA0316 protein 
(LOC100031992), mRNA
Length=4344

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  3     TTTGGAGATGGGGAATTCTG  22
             ||||||||||||||||||||
Sbjct  3243  TTTGGAGATGGGGAATTCTG  3224


>gb|AC194783.3| Rhesus Macaque  BAC CH250-375H14 () complete sequence
Length=158273

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  19     TCTGGAAGGCTTTTAACCCC  38
              ||||||||||||||||||||
Sbjct  40990  TCTGGAAGGCTTTTAACCCC  41009


>gb|AC190221.3| Pan troglodytes BAC clone CH251-697F15 from chromosome 7, complete 
sequence
Length=174215

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  47      GACTGCTAGGAAATTTAAAA  66
               ||||||||||||||||||||
Sbjct  166994  GACTGCTAGGAAATTTAAAA  167013



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 2136076
Number of extensions: 124088
Number of successful extensions: 33272
Number of sequences better than 10: 15
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 33272
Number of HSP's successfully gapped: 15
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY6ZMWB0016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|562-660
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   139    2e-30
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   133    1e-28
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   127    8e-27
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   119    2e-24
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   117    8e-24
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   117    8e-24
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   117    8e-24
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   117    8e-24
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   117    8e-24
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   117    8e-24
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   117    8e-24
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   117    8e-24
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   117    8e-24
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   117    8e-24
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   117    8e-24
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   113    1e-22
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   109    2e-21
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   109    2e-21
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   101    5e-19
gb|EF547367.1|  South African passiflora virus polyprotein gen...  85.7    3e-14
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...  79.8    2e-12
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...  79.8    2e-12
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...  77.8    7e-12
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  77.8    7e-12
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...  77.8    7e-12
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  77.8    7e-12
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  69.9    2e-09
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...  61.9    4e-07
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  61.9    4e-07
gb|EU035271.1|  Malaysian Passiflora virus polyprotein mRNA, p...  60.0    2e-06
emb|AJ421466.1|SMO421466  Sugarcane mosaic virus genomic RNA f...  58.0    6e-06
emb|AJ421465.1|SMO421465  Sugarcane mosaic virus genomic RNA f...  58.0    6e-06
gb|EF579955.1|  Moroccan watermelon mosaic virus isolate TN05-...  56.0    3e-05
dbj|AB246773.1|  East Asian Passiflora virus genomic RNA, comp...  54.0    1e-04
dbj|D85849.1|  East Asian Passiflora virus gene for polyprotei...  54.0    1e-04
gb|AY974328.1|  Omphalodes virus Y polyprotein gene, partial cds   54.0    1e-04
gb|EU371650.1|  Zucchini yellow mosaic virus isolate H8 polypr...  52.0    4e-04
gb|EU371649.1|  Zucchini yellow mosaic virus isolate leaves po...  52.0    4e-04
gb|EU371648.1|  Zucchini yellow mosaic virus isolate L5 polypr...  52.0    4e-04
gb|EU371647.1|  Zucchini yellow mosaic virus isolate J7228 pol...  52.0    4e-04
gb|EU371646.1|  Zucchini yellow mosaic virus isolate G6228 pol...  52.0    4e-04
gb|EU371645.1|  Zucchini yellow mosaic virus isolate J787 poly...  52.0    4e-04
gb|AY611021.1|  Zucchini yellow mosaic virus isolate CH99/116 ...  52.0    4e-04
dbj|AB188116.1|  Zucchini yellow mosaic virus genomic RNA, com...  52.0    4e-04
dbj|AB188115.1|  Zucchini yellow mosaic virus genomic RNA, com...  52.0    4e-04
gb|AF513551.1|  Zucchini yellow mosaic virus isolate ningbo co...  52.0    4e-04
gb|AF513550.1|  Zucchini yellow mosaic virus isolate shangyu c...  52.0    4e-04
gb|AY074810.1|  Zucchini yellow mosaic virus isolate Ningbo co...  52.0    4e-04
gb|AY074809.1|  Zucchini yellow mosaic virus isolate Beijing c...  52.0    4e-04
gb|AF308732.1|AF308732  Zucchini yellow mosaic virus polyprote...  52.0    4e-04
gb|AF305545.1|AF305545  Moroccan watermelon mosaic virus polyp...  52.0    4e-04
emb|AJ889836.1|  Buddleja crispa potyvirus partial CP gene for...  52.0    4e-04
gb|DQ333806.1|  Zucchini yellow mosaic virus polyprotein-like ...  52.0    4e-04
dbj|D00692.1|ZYMV  Zucchini yellow mosaic virus gene for polyp...  52.0    4e-04
gb|EU042750.1|  Ornamental onion stripe mosaic virus polyprote...  50.1    0.002
gb|DQ846832.1|  Sugarcane mosaic virus isolate Shaanxi polypro...  50.1    0.002
gb|AY042184.1|  Sugarcane mosaic virus isolate Beijing, comple...  50.1    0.002
gb|AY660663.1|  Maize dwarf mosaic virus isolate Hebei coat pr...  50.1    0.002
gb|AY639645.1|  Sugarcane mosaic virus polyprotein gene, parti...  50.1    0.002
gb|AY434733.1|  Sugarcane mosaic virus isolate 904 polyprotein...  50.1    0.002
gb|AY434732.1|  Sugarcane mosaic virus isolate 543 polyprotein...  50.1    0.002
gb|AY434731.1|  Sugarcane mosaic virus isolate 515.3 polyprote...  50.1    0.002
gb|AY222743.1|  Sugarcane mosaic virus polyprotein gene, parti...  50.1    0.002
gb|AY149118.1|  Sugarcane mosaic virus isolate SCMV-SD, comple...  50.1    0.002
gb|AF494510.1|  Sugarcane mosaic virus, complete genome            50.1    0.002
gb|AF540989.1|  Maize dwarf mosaic virus coat protein (CP) mRN...  50.1    0.002
gb|S77088.1|  Maize dwarf mosaic virus polyprotein gene, parti...  50.1    0.002
emb|AJ310105.1|SMO310105  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ297628.1|SMO297628  Sugarcane mosaic virus genomic RNA, ...  50.1    0.002
gb|AY195610.2|  Sugarcane mosaic virus isolate Mx polyprotein ...  50.1    0.002
gb|AY569692.1|  Sugarcane mosaic virus isolate SCMV-SX, comple...  50.1    0.002
emb|X98166.1|SMVSEE288  Sugarcane mosaic virus mRNA for coat p...  50.1    0.002
emb|AJ421464.1|SMO421464  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421463.1|SMO421463  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421461.1|SMO421461  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421460.1|SMO421460  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421459.1|SMO421459  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421458.1|SMO421458  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421457.1|SMO421457  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ421456.1|SMO421456  Sugarcane mosaic virus genomic RNA f...  50.1    0.002
emb|AJ310110.1|SMO310110  Sugarcane mosaic virus partial genom...  50.1    0.002
emb|AJ310109.1|SMO310109  Sugarcane mosaic virus partial genom...  50.1    0.002
emb|AJ271085.1|SMO271085  Sugarcane mosaic virus partial genom...  50.1    0.002
gb|DQ316233.1|  Sugarcane mosaic virus isolate mz-gz1 polyprot...  50.1    0.002
emb|AJ006201.1|SMVAJ6201  Sugarcane mosaic virus RNA, 3'-end o...  50.1    0.002
gb|AF548508.1|  Yam mild mosaic virus isolate Guy 3 polyprotei...  48.1    0.006
gb|AF491352.1|  Spartina mottle virus from Italy polyprotein g...  48.1    0.006
emb|AJ867580.1|  Ageratum houstonianum potyvirus                   48.1    0.006
emb|AJ429523.1|BCO429523  Bean common mosaic virus partial cp ...  48.1    0.006
emb|AJ429522.1|BCO429522  Bean common mosaic virus partial cp ...  48.1    0.006
gb|AF127933.1|AF127933  Zucchini yellow mosaic virus isolate T...  48.1    0.006
dbj|AB012221.1|  Chilli vein-banding mottle virus RNA for poly...  48.1    0.006
gb|EU081882.1|  Chilli veinal mottle virus isolate TN5 capsid ...  46.1    0.024
gb|EF221615.1|  Chilli veinal mottle virus isolate D10 polypro...  46.1    0.024
gb|EF213703.1|  Chilli veinal mottle virus isolate PM1 polypro...  46.1    0.024
gb|EF213702.1|  Chilli veinal mottle virus isolate L-32 polypr...  46.1    0.024
gb|EF213701.1|  Chilli veinal mottle virus isolate TN9 polypro...  46.1    0.024
gb|EF213698.1|  Chilli veinal mottle virus isolate 98-3 polypr...  46.1    0.024
gb|EF213697.1|  Chilli veinal mottle virus isolate TN15 polypr...  46.1    0.024

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ACCCCCCGGTCCGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  562  ACCCCCCGGTCCGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTC  621

Query  61   GATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCA  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  622  GATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCA  660


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  139 bits (70),  Expect = 2e-30
 Identities = 73/74 (98%), Gaps = 0/74 (0%)
 Strand=Plus/Plus

Query  1    ACCCCCCGGTCCGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTC  60
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  562  ACCCCCCGGTCCGGACTGCTAGGAAATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTC  621

Query  61   GATTTCTATGAAGT  74
            ||||||||||||||
Sbjct  622  GATTTCTATGAAGT  635


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 73/75 (97%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCCAAG  645

Query  85   ACTTCTGACAGAGCA  99
            |||||||||||||||
Sbjct  646  ACTTCTGACAGAGCA  660


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 82/88 (93%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  12   CGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGA  71
            |||||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  585  CGGACTGCTGAGGAATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGA  644

Query  72   AGTCACATCCAAGACTTCTGACAGAGCA  99
            ||||||||| ||||||||||| ||||||
Sbjct  645  AGTCACATCTAAGACTTCTGAGAGAGCA  672


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 81/88 (92%), Gaps = 0/88 (0%)
 Strand=Plus/Plus

Query  12   CGGACTGCTAGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGA  71
            |||||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  573  CGGACTGCTGAGGAATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGA  632

Query  72   AGTCACATCCAAGACTTCTGACAGAGCA  99
            |||||| || ||||||||||| ||||||
Sbjct  633  AGTCACGTCTAAGACTTCTGATAGAGCA  660


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 71/75 (94%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAG  645

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  646  ACTTCTGATAGAGCA  660


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 71/75 (94%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAG  645

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  646  ACTTCTGATAGAGCA  660


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 71/75 (94%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAG  645

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  646  ACTTCTGATAGAGCA  660


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 71/75 (94%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  586  AATTTAAGAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAG  645

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  646  ACTTCTGATAGAGCA  660


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 74/79 (93%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  21   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  80
            ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  641

Query  81   CAAGACTTCTGACAGAGCA  99
             ||||||||||| ||||||
Sbjct  642  TAAGACTTCTGAGAGAGCA  660


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 74/79 (93%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  21   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  80
            ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  641

Query  81   CAAGACTTCTGACAGAGCA  99
             ||||||||||| ||||||
Sbjct  642  TAAGACTTCTGAGAGAGCA  660


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 74/79 (93%), Gaps = 0/79 (0%)
 Strand=Plus/Plus

Query  21   AGGAAATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  80
            ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  582  AGGAATTTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATC  641

Query  81   CAAGACTTCTGACAGAGCA  99
             ||||||||||| ||||||
Sbjct  642  TAAGACTTCTGAGAGAGCA  660


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 65/67 (97%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGA  92
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct  594  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGA  653

Query  93   CAGAGCA  99
            |||||||
Sbjct  654  CAGAGCA  660


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 65/67 (97%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGA  92
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct  594  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGA  653

Query  93   CAGAGCA  99
            |||||||
Sbjct  654  CAGAGCA  660


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 65/67 (97%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGA  92
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGA  656

Query  93   CAGAGCA  99
            |||||||
Sbjct  657  CAGAGCA  663


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 65/67 (97%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGA  92
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGA  656

Query  93   CAGAGCA  99
            |||||||
Sbjct  657  CAGAGCA  663


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 69/73 (94%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  27    TTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGAC  86
             |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct  1048  TTTAAAAGCCAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGAC  1107

Query  87    TTCTGACAGAGCA  99
             |||||| ||||||
Sbjct  1108  TTCTGAGAGAGCA  1120


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 70/75 (93%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25    AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
             ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  1213  AATTTAAGAGATAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAG  1272

Query  85    ACTTCTGACAGAGCA  99
             ||||| || ||||||
Sbjct  1273  ACTTCCGAAAGAGCA  1287


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 70/75 (93%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct  614  AATTTAAGAGACAAGAGCTTGGCAAGGTACGCTTTCGATTTCTATGAGGTCACATCTAAG  673

Query  85   ACTTCTGACAGAGCA  99
            |||||||||||||||
Sbjct  674  ACTTCTGACAGAGCA  688


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 69/75 (92%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct  829  AATTTAAGAGATAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAG  888

Query  85   ACTTCTGACAGAGCA  99
            ||||| || ||||||
Sbjct  889  ACTTCCGAAAGAGCA  903


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 58/63 (92%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  37    AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  96
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct  1210  AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTTCTGACAGA  1269

Query  97    GCA  99
             |||
Sbjct  1270  GCA  1272


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  622  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCA  665


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  33   AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  597  AGACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCA  640


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 66/75 (88%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25    AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
             |||||||  ||||||||||| ||||||||||||||||| ||||| || || |||||||| 
Sbjct  8995  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAA  9054

Query  85    ACTTCTGACAGAGCA  99
             |||||||| ||||||
Sbjct  9055  ACTTCTGATAGAGCA  9069


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 57/63 (90%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  37    AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  96
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||| ||||||||
Sbjct  949   AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTCCTGACAGA  1008

Query  97    GCA  99
             |||
Sbjct  1009  GCA  1011


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 66/75 (88%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            |||||||  ||||||||||| ||||||||||||||||| ||||| || || |||||||| 
Sbjct  751  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAA  810

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  811  ACTTCTGATAGAGCA  825


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 57/63 (90%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  37    AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  96
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||| ||||||||
Sbjct  949   AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTCCTGACAGA  1008

Query  97    GCA  99
             |||
Sbjct  1009  GCA  1011


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 65/75 (86%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            |||||||  |||||||||||||||||||||||||| || ||||| ||||| || || || 
Sbjct  778  AATTTAAGGGACAAGAGCTTAGCAAGGTATGCTTTTGACTTCTACGAAGTGACCTCTAAA  837

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  838  ACTTCTGATAGAGCA  852


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 55/63 (87%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  37   AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  96
            |||||||| ||||||||||||||||| ||||| || || |||||||| || ||||| |||
Sbjct  838  AAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAAACCTCTGATAGA  897

Query  97   GCA  99
            |||
Sbjct  898  GCA  900


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 61.9 bits (31),  Expect = 4e-07
 Identities = 64/75 (85%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  25   AATTTAAAAGACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAG  84
            |||||||  ||||||||||| |||||||||||||| || ||||| ||||| || || || 
Sbjct  631  AATTTAAGGGACAAGAGCTTGGCAAGGTATGCTTTTGACTTCTACGAAGTGACCTCTAAA  690

Query  85   ACTTCTGACAGAGCA  99
            |||||||| ||||||
Sbjct  691  ACTTCTGATAGAGCA  705


>gb|EU035271.1| Malaysian Passiflora virus polyprotein mRNA, partial cds
Length=1242

 Score = 60.0 bits (30),  Expect = 2e-06
 Identities = 36/38 (94%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  49    AGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGAC  86
             |||||||||||||||||||||||||| || ||||||||
Sbjct  1024  AGGTATGCTTTCGATTTCTATGAAGTAACCTCCAAGAC  1061


>emb|AJ421466.1|SMO421466 Sugarcane mosaic virus genomic RNA for partial polyprotein gene, 
isolate ZJ2
Length=802

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 32/33 (96%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  40   AGCTTAGCAAGGTATGCTTTCGATTTCTATGAA  72
            ||||||||| |||||||||||||||||||||||
Sbjct  628  AGCTTAGCACGGTATGCTTTCGATTTCTATGAA  660


>emb|AJ421465.1|SMO421465 Sugarcane mosaic virus genomic RNA for partial polyprotein gene, 
isolate ZJ1
Length=802

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 32/33 (96%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  40   AGCTTAGCAAGGTATGCTTTCGATTTCTATGAA  72
            ||||||||| |||||||||||||||||||||||
Sbjct  628  AGCTTAGCACGGTATGCTTTCGATTTCTATGAA  660


>gb|EF579955.1| Moroccan watermelon mosaic virus isolate TN05-76, complete genome
Length=9730

 Score = 56.0 bits (28),  Expect = 3e-05
 Identities = 49/56 (87%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  43    TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGC  98
             ||||| |||||||||||||||||||||||  | || ||||||||| |||| |||||
Sbjct  9313  TTAGCCAGGTATGCTTTCGATTTCTATGAGATGACTTCCAAGACTCCTGAGAGAGC  9368


>dbj|AB246773.1| East Asian Passiflora virus genomic RNA, complete genome, strain: 
AO
Length=10046

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 45/51 (88%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  49    AGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCA  99
             ||||||||||| |||||||||||||| || ||||||||  || ||||||||
Sbjct  9573  AGGTATGCTTTTGATTTCTATGAAGTAACCTCCAAGACGCCTAACAGAGCA  9623


>dbj|D85849.1| East Asian Passiflora virus gene for polyprotein, partial cds
Length=1585

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 45/51 (88%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  49    AGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCA  99
             ||||||||||| |||||||||||||| || ||||||||  || ||||||||
Sbjct  1112  AGGTATGCTTTTGATTTCTATGAAGTAACCTCCAAGACGCCTAACAGAGCA  1162


>gb|AY974328.1| Omphalodes virus Y polyprotein gene, partial cds
Length=1680

 Score = 54.0 bits (27),  Expect = 1e-04
 Identities = 39/43 (90%), Gaps = 0/43 (0%)
 Strand=Plus/Plus

Query  44    TAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGAC  86
             |||||||||||||||||||||| |||||| |||| || |||||
Sbjct  1241  TAGCAAGGTATGCTTTCGATTTTTATGAAATCACTTCTAAGAC  1283


>gb|EU371650.1| Zucchini yellow mosaic virus isolate H8 polyprotein gene, partial 
cds
Length=755

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  594  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  627


>gb|EU371649.1| Zucchini yellow mosaic virus isolate leaves polyprotein gene, 
partial cds
Length=786

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  594  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  627


>gb|EU371648.1| Zucchini yellow mosaic virus isolate L5 polyprotein gene, partial 
cds
Length=757

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  537  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  570


>gb|EU371647.1| Zucchini yellow mosaic virus isolate J7228 polyprotein gene, 
partial cds
Length=799

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  578  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  611


>gb|EU371646.1| Zucchini yellow mosaic virus isolate G6228 polyprotein gene, 
partial cds
Length=782

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  589  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  622


>gb|EU371645.1| Zucchini yellow mosaic virus isolate J787 polyprotein gene, partial 
cds
Length=815

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  594  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  627


>gb|AY611021.1| Zucchini yellow mosaic virus isolate CH99/116 polyprotein gene, 
partial cds
Length=1176

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  769  TTAGCACGCTATGCTTTCGATTTCTATGAAGTCA  802


>dbj|AB188116.1| Zucchini yellow mosaic virus genomic RNA, complete genome, isolate:2002
Length=9593

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43    TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
             |||||| | |||||||||||||||||||||||||
Sbjct  9158  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  9191


>dbj|AB188115.1| Zucchini yellow mosaic virus genomic RNA, complete genome, isolate:Z5-1
Length=9593

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43    TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
             |||||| | |||||||||||||||||||||||||
Sbjct  9158  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  9191


>gb|AF513551.1| Zucchini yellow mosaic virus isolate ningbo coat protein gene, 
partial cds
Length=1053

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  616  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  649


>gb|AF513550.1| Zucchini yellow mosaic virus isolate shangyu coat protein gene, 
partial cds
Length=1053

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  616  TTAGCACGCTATGCTTTCGATTTCTATGAAGTCA  649


>gb|AY074810.1| Zucchini yellow mosaic virus isolate Ningbo coat protein gene, 
partial cds
Length=1053

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  616  TTAGCACGATATGCTTTCGATTTCTATGAAGTCA  649


>gb|AY074809.1| Zucchini yellow mosaic virus isolate Beijing coat protein gene, 
partial cds
Length=1053

 Score = 52.0 bits (26),  Expect = 4e-04
 Identities = 32/34 (94%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  43   TTAGCAAGGTATGCTTTCGATTTCTATGAAGTCA  76
            |||||| | |||||||||||||||||||||||||
Sbjct  616  TTAGCACGCTATGCTTTCGATTTCTATGAAGTCA  649



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 2069416
Number of extensions: 121676
Number of successful extensions: 32125
Number of sequences better than 10: 29
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 32125
Number of HSP's successfully gapped: 29
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY71FWN4016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|595-693
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   180    6e-43
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   172    2e-40
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   172    2e-40
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   165    4e-38
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   165    4e-38
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   165    4e-38
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   165    4e-38
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   165    4e-38
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   165    4e-38
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   165    4e-38
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   161    6e-37
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   161    6e-37
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   161    6e-37
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   161    6e-37
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   159    2e-36
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   159    2e-36
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   157    9e-36
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   133    1e-28
gb|EF547367.1|  South African passiflora virus polyprotein gen...   127    8e-27
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   117    8e-24
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   117    8e-24
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   117    8e-24
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   117    8e-24
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   115    3e-23
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   115    3e-23
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   111    5e-22
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  91.7    5e-16
dbj|AB206834.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
dbj|AB206833.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
dbj|AB206832.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
dbj|AB206831.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
dbj|AB206830.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
dbj|AB181493.1|  Soybean mosaic virus CP gene for coat protein...  89.7    2e-15
emb|AJ628751.1|  Soybean mosaic virus partial polyprotein gene...  89.7    2e-15
gb|AF242845.1|AF242845  Soybean mosaic virus G6 polyprotein ge...  89.7    2e-15
gb|AF200569.1|AF200567S3  Soybean mosaic virus G6 coat protein...  89.7    2e-15
gb|AF200566.1|AF200564S3  Soybean mosaic virus G5 coat protein...  89.7    2e-15
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  83.8    1e-13
gb|DQ360817.1|  Soybean mosaic virus isolate BZ polyprotein ge...  81.8    4e-13
emb|AJ628752.1|  Soybean mosaic virus partial polyprotein gene...  81.8    4e-13
emb|AJ310200.1|SMO310200  Soybean mosaic virus genomic RNA for...  81.8    4e-13
emb|AJ507388.2|SMO507388  Soybean mosaic virus gene for polypr...  81.8    4e-13
emb|AJ609298.1|  Soybean mosaic virus partial mRNA for coat pr...  81.8    4e-13
gb|AF200563.1|AF200561S3  Soybean mosaic virus G3 coat protein...  81.8    4e-13
dbj|AB085900.1|  Soybean mosaic virus CP gene for coat protein...  81.8    4e-13
gb|AY656816.1|  Wisteria vein mosaic virus isolate Beijing, co...  79.8    2e-12
gb|AY519365.1|  Wisteria vein mosaic virus WVMV-BJ coat protei...  79.8    2e-12
gb|DQ517431.1|  Soybean mosaic virus isolate g coat protein ge...  73.8    1e-10
gb|AY294045.1|  Soybean mosaic virus strain G7H, complete genome   73.8    1e-10
gb|AY294044.1|  Soybean mosaic virus strain G5, complete genome    73.8    1e-10
gb|DQ360822.1|  Soybean mosaic virus isolate XY polyprotein ge...  73.8    1e-10
emb|AJ628755.1|  Soybean mosaic virus partial polyprotein gene...  73.8    1e-10
emb|AJ628750.1|  Soybean mosaic virus polyprotein gene, genomi...  73.8    1e-10
gb|AY216987.1|  Soybean mosaic virus strain G7d polyprotein pr...  73.8    1e-10
gb|AY216010.1|  Soybean mosaic virus strain G7, complete sequence  73.8    1e-10
gb|AF242844.1|AF242844  Soybean mosaic virus Al5 polyprotein g...  73.8    1e-10
gb|AY216489.1|AY216488S2  Soybean mosaic virus strain 770 coat...  73.8    1e-10
gb|AY216487.1|AY216486S2  Soybean mosaic virus strain 746 coat...  73.8    1e-10
emb|X63771.1|SMVCP  Soybean Mosaic Virus gene for coat protein     73.8    1e-10
gb|AF200581.1|AF200579S3  Soybean mosaic virus IL1 coat protei...  73.8    1e-10
gb|AF200578.1|AF200576S3  Soybean mosaic virus VA1 coat protei...  73.8    1e-10
gb|AF200552.1|AF200550S3  Soybean mosaic virus ChH1 coat prote...  73.8    1e-10
dbj|AB100446.1|  Soybean mosaic virus gene for coat protein, p...  73.8    1e-10
dbj|AB100443.1|  Soybean mosaic virus genomic RNA, complete ge...  73.8    1e-10
dbj|AB100442.1|  Soybean mosaic virus genomic RNA, complete ge...  73.8    1e-10
gb|U25673.1|SMU25673  Soybean mosaic virus coat protein gene, ...  73.8    1e-10
dbj|D88616.1|  Soybean mosaic virus genomic RNA for virus coat...  73.8    1e-10
gb|AF484549.1|  Wisteria vein mosaic virus polyprotein gene, p...  71.9    4e-10
gb|EU035271.1|  Malaysian Passiflora virus polyprotein mRNA, p...  67.9    7e-09
dbj|AB246773.1|  East Asian Passiflora virus genomic RNA, comp...  67.9    7e-09
dbj|D85849.1|  East Asian Passiflora virus gene for polyprotei...  67.9    7e-09
gb|DQ517430.1|  Soybean mosaic virus isolate f coat protein ge...  65.9    3e-08
gb|DQ517429.1|  Soybean mosaic virus isolate c coat protein ge...  65.9    3e-08
gb|DQ517428.1|  Soybean mosaic virus isolate b coat protein ge...  65.9    3e-08
dbj|AB206829.1|  Soybean mosaic virus CP gene for coat protein...  65.9    3e-08
dbj|AB206828.1|  Soybean mosaic virus CP gene for coat protein...  65.9    3e-08
dbj|AB206827.1|  Soybean mosaic virus CP gene for coat protein...  65.9    3e-08
gb|AY799852.1|  Soybean mosaic virus isolate 2K-38 coat protei...  65.9    3e-08
gb|AY216485.1|AY216484S2  Soybean mosaic virus strain 452 coat...  65.9    3e-08
gb|AY216483.1|AY216482S2  Soybean mosaic virus strain 413 coat...  65.9    3e-08
gb|AY216479.1|AY216478S2  Soybean mosaic virus strain 1071 coa...  65.9    3e-08
gb|AF241739.1|AF241739  Soybean mosaic virus G7 polyprotein ge...  65.9    3e-08
emb|AJ511347.1|SMO511347  Soybean mosaic virus partial gene fo...  65.9    3e-08
emb|AJ619757.1|  Soybean mosaic virus gene for polyprotein, ge...  65.9    3e-08
emb|AJ609297.1|  Soybean mosaic virus partial mRNA for coat pr...  65.9    3e-08
emb|AJ293277.1|SMO293277  Soybean mosaic virus partial genomic...  65.9    3e-08
gb|AF200575.1|AF200573S3  Soybean mosaic virus G7F coat protei...  65.9    3e-08
gb|AF200572.1|AF200570S3  Soybean mosaic virus G7a coat protei...  65.9    3e-08
gb|AF200560.1|AF200558S3  Soybean mosaic virus G1 coat protein...  65.9    3e-08
gb|AF200557.1|AF200555S3  Soybean mosaic virus ChS coat protei...  65.9    3e-08
gb|AF200554.1|AF200553S2  Soybean mosaic virus ChJ coat protei...  65.9    3e-08
gb|AF200546.1|AF200544S3  Soybean mosaic virus Ch1 coat protei...  65.9    3e-08
gb|AF200543.1|SEG_SMCHGSI3  Soybean mosaic virus ChGs1 coat pr...  65.9    3e-08
gb|AF200540.1|SEG_SMCHHII3  Soybean mosaic virus ChH2 coat pro...  65.9    3e-08
gb|AF200537.1|SEG_SMCHGSII3  Soybean mosaic virus ChGs2 coat p...  65.9    3e-08
dbj|AB100448.1|  Soybean mosaic virus gene for coat protein, p...  65.9    3e-08
dbj|AB100447.1|  Soybean mosaic virus gene for coat protein, p...  65.9    3e-08
dbj|D00507.2|SMVCPA  Soybean mosaic virus N genomic RNA, compl...  65.9    3e-08

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  693


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCCAAGACTTCTGAC  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAGACTTCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  693


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  607  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCTGAG  666

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  667  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  705


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAGACTTCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAGACTTCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAGACTTCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACGTCTAAGACTTCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGAC  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || |||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAGATGAAGGCTGCAGCT  693


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGAC  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || |||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCACAGATGAAGGCTGCAGCT  693


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  598  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGAC  657

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || |||||||||||||||
Sbjct  658  AGAGCAAGGGAAGCAATAGCACAGATGAAGGCTGCAGCT  696


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  598  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCACATCTAAGACTTCTGAC  657

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || |||||||||||||||
Sbjct  658  AGAGCAAGGGAAGCAATAGCACAGATGAAGGCTGCAGCT  696


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3     CAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAG  62
             ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct  1057  CAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCTGAGAG  1116

Query  63    AGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
             |||||||||||||||||| ||||||||||||||||||
Sbjct  1117  AGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  1153


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3    CAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAG  62
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct  597  CAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCTGAGAG  656

Query  63   AGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||| ||||||||||||||||||
Sbjct  657  AGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3    CAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAG  62
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct  597  CAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCTGAGAG  656

Query  63   AGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||| ||||||||||||||||||
Sbjct  657  AGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3    CAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAG  62
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct  597  CAAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCTGAGAG  656

Query  63   AGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||| ||||||||||||||||||
Sbjct  657  AGCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  693


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  159 bits (80),  Expect = 2e-36
 Identities = 92/96 (95%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4     AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
             |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct  1225  AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCCGAAAGA  1284

Query  64    GCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
             ||||||||||||||||| ||||||||||||||||||
Sbjct  1285  GCAAGGGAAGCAATAGCACAAATGAAGGCTGCAGCT  1320


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  159 bits (80),  Expect = 2e-36
 Identities = 92/96 (95%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct  841  AAGAGCTTGGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCTAAGACTTCCGAAAGA  900

Query  64   GCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            ||||||||||||||||||||||||||||||||||||
Sbjct  901  GCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  936


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct  623  GACAAGAGCTTGGCAAGGTACGCTTTCGATTTCTATGAGGTCACATCTAAGACTTCTGAC  682

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            ||||||||||||||||||||||| |||||||||||||||
Sbjct  683  AGAGCAAGGGAAGCAATAGCGCAGATGAAGGCTGCAGCT  721


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||||||||||||||||||||||||||||||||| || || ||   | |||| 
Sbjct  595  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTTACGTCTAAATTTCCTGAT  654

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  655  AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  693


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4     AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct  1210  AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTTCTGACAGA  1269

Query  64    GCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
             ||||||||||||||||| |||||||| || ||||||
Sbjct  1270  GCAAGGGAAGCAATAGCACAAATGAAAGCCGCAGCT  1305


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
             ||||||||||| ||||||||||||||||| ||||| || || |||||||| |||||||| 
Sbjct  9004  GACAAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAAACTTCTGAT  9063

Query  61    AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
             |||||||| ||||||||||| ||||||||||| ||||||
Sbjct  9064  AGAGCAAGAGAAGCAATAGCACAAATGAAGGCCGCAGCT  9102


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| ||||||||||  |  |||| ||| |||
Sbjct  623  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCAGGTTTAAGATTTCCGAC  682

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || ||||||| |||||||
Sbjct  683  AGAGCAAGGGAAGCAATAGCCCAGATGAAGGTTGCAGCT  721


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||||||||| ||||||||||  |  |||| ||| |||
Sbjct  598  GACAAGAGCTTAGCAAGGTATGCTTTCGATTTTTATGAAGTCAGGTTTAAGATTTCCGAC  657

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||| || ||||||| |||||||
Sbjct  658  AGAGCAAGGGAAGCAATAGCCCAGATGAAGGTTGCAGCT  696


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||| ||||||||||||||||| ||||| || || |||||||| |||||||| 
Sbjct  760  GACAAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAAACTTCTGAT  819

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            |||||||| ||||||||||| ||||||||||| ||||||
Sbjct  820  AGAGCAAGAGAAGCAATAGCACAAATGAAGGCCGCAGCT  858


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 79/86 (91%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  4     AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||| ||||||||
Sbjct  949   AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTCCTGACAGA  1008

Query  64    GCAAGGGAAGCAATAGCGCAAATGAA  89
             ||||||||||||||||| ||||||||
Sbjct  1009  GCAAGGGAAGCAATAGCACAAATGAA  1034


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  115 bits (58),  Expect = 3e-23
 Identities = 79/86 (91%), Gaps = 0/86 (0%)
 Strand=Plus/Plus

Query  4     AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
             |||||||| ||||||||||||||||| |||||||| || |||||||| ||| ||||||||
Sbjct  949   AAGAGCTTGGCAAGGTATGCTTTCGACTTCTATGAGGTTACATCCAAAACTCCTGACAGA  1008

Query  64    GCAAGGGAAGCAATAGCGCAAATGAA  89
             ||||||||||||||||| ||||||||
Sbjct  1009  GCAAGGGAAGCAATAGCACAAATGAA  1034


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 86/96 (89%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    AAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGA  63
            |||||||| ||||||||||||||||| ||||| || || |||||||| || ||||| |||
Sbjct  838  AAGAGCTTGGCAAGGTATGCTTTCGACTTCTACGAGGTAACATCCAAAACCTCTGATAGA  897

Query  64   GCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCT  99
            ||||| ||||||||||||||||||||||| ||||||
Sbjct  898  GCAAGAGAAGCAATAGCGCAAATGAAGGCCGCAGCT  933


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 91.7 bits (46),  Expect = 5e-16
 Identities = 85/98 (86%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            |||||||||||||||||||||||||| || ||||| ||||| || || || |||||||| 
Sbjct  787  GACAAGAGCTTAGCAAGGTATGCTTTTGACTTCTACGAAGTGACCTCTAAAACTTCTGAT  846

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGC  98
            |||||| | ||||||||||| |||||||| || |||||
Sbjct  847  AGAGCACGAGAAGCAATAGCACAAATGAAAGCGGCAGC  884


>dbj|AB206834.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Ok2
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>dbj|AB206833.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Tk-1
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>dbj|AB206832.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
To2
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>dbj|AB206831.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Hi1
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>dbj|AB206830.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Ok1
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>dbj|AB181493.1| Soybean mosaic virus CP gene for coat protein, partial cds, strain: 
D
Length=798

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>emb|AJ628751.1| Soybean mosaic virus partial polyprotein gene for NIb and coat 
proteins, genomic RNA, isolate SH
Length=1733

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19    TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
             |||||||| |||||||||||||| || ||||||||  |  | ||||||||||||||| ||
Sbjct  1267  TATGCTTTTGATTTCTATGAAGTGACTTCCAAGACACCAAATAGAGCAAGGGAAGCATTA  1326

Query  79    GCGCAAATGAAGGCTGCAGCT  99
             |||||||||||||||||||||
Sbjct  1327  GCGCAAATGAAGGCTGCAGCT  1347


>gb|AF242845.1|AF242845 Soybean mosaic virus G6 polyprotein gene, partial cds
Length=1155

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  689  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  748

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  749  GCGCAAATGAAGGCTGCAGCT  769


>gb|AF200569.1|AF200567S3 Soybean mosaic virus G6 coat protein gene, partial cds
Length=925

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  667  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  726

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  727  GCGCAAATGAAGGCTGCAGCT  747


>gb|AF200566.1|AF200564S3 Soybean mosaic virus G5 coat protein gene, partial cds
Length=918

 Score = 89.7 bits (45),  Expect = 2e-15
 Identities = 72/81 (88%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| ||||| ||||| ||  |  |||| |||||||||||||||
Sbjct  668  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  727

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  728  GCGCAAATGAAGGCTGCAGCT  748


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 84/98 (85%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    GACAAGAGCTTAGCAAGGTATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGAC  60
            ||||||||||| |||||||||||||| || ||||| ||||| || || || |||||||| 
Sbjct  640  GACAAGAGCTTGGCAAGGTATGCTTTTGACTTCTACGAAGTGACCTCTAAAACTTCTGAT  699

Query  61   AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGC  98
            |||||| | ||||||||||| |||||||| || |||||
Sbjct  700  AGAGCACGAGAAGCAATAGCACAAATGAAAGCAGCAGC  737


>gb|DQ360817.1| Soybean mosaic virus isolate BZ polyprotein gene, partial cds
Length=846

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| |||||||||||||| || ||||||||  |  | |||||||| |||||| ||
Sbjct  634  TATGCTTTTGATTTCTATGAAGTGACTTCCAAGACACCAAATAGAGCAAGAGAAGCATTA  693

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  694  GCGCAAATGAAGGCTGCAGCT  714


>emb|AJ628752.1| Soybean mosaic virus partial polyprotein gene for NIb and coat 
proteins, genomic RNA, isolate SY1
Length=1733

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19    TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
             |||||||| |||||||||||||| || ||||||||  |  | |||||||| |||||| ||
Sbjct  1267  TATGCTTTTGATTTCTATGAAGTGACTTCCAAGACACCAAATAGAGCAAGAGAAGCATTA  1326

Query  79    GCGCAAATGAAGGCTGCAGCT  99
             |||||||||||||||||||||
Sbjct  1327  GCGCAAATGAAGGCTGCAGCT  1347


>emb|AJ310200.1|SMO310200 Soybean mosaic virus genomic RNA for polyprotein
Length=9585

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19    TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
             |||||||| ||||||||||| ||||| ||||| ||  |  |||| ||||| |||||||||
Sbjct  9121  TATGCTTTTGATTTCTATGAGGTCACTTCCAAAACACCAAACAGGGCAAGAGAAGCAATA  9180

Query  79    GCGCAAATGAAGGCTGCAGCT  99
             |||||||||||||||||||||
Sbjct  9181  GCGCAAATGAAGGCTGCAGCT  9201


>emb|AJ507388.2|SMO507388 Soybean mosaic virus gene for polyprotein, genomic RNA, strain 
P
Length=9735

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19    TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
             |||||||| |||||||||||||| || || |||||  |  | ||||||||||||||| ||
Sbjct  9269  TATGCTTTTGATTTCTATGAAGTGACTTCTAAGACACCAAATAGAGCAAGGGAAGCATTA  9328

Query  79    GCGCAAATGAAGGCTGCAGCT  99
             |||||||||||||||||||||
Sbjct  9329  GCGCAAATGAAGGCTGCAGCT  9349


>emb|AJ609298.1| Soybean mosaic virus partial mRNA for coat protein (CP gene), 
isolate CN3
Length=798

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| |||||||||||  |||| ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGATCACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>gb|AF200563.1|AF200561S3 Soybean mosaic virus G3 coat protein gene, partial cds
Length=926

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| || |||||||| ||||| || |||||  |  |||| |||||||||||||||
Sbjct  668  TATGCTTTTGACTTCTATGAGGTCACTTCTAAGACACCAAACAGGGCAAGGGAAGCAATA  727

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  728  GCGCAAATGAAGGCTGCAGCT  748


>dbj|AB085900.1| Soybean mosaic virus CP gene for coat protein, partial cds
Length=1051

 Score = 81.8 bits (41),  Expect = 4e-13
 Identities = 71/81 (87%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| || |||||||| ||||| || |||||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGACTTCTATGAGGTCACTTCTAAGACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            |||||||||||||||||||||
Sbjct  643  GCGCAAATGAAGGCTGCAGCT  663


>gb|AY656816.1| Wisteria vein mosaic virus isolate Beijing, complete genome
Length=9695

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 70/80 (87%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  19    TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
             |||||||| ||||| ||||||||||| || |||||| |  | |||||||| |||||||||
Sbjct  9228  TATGCTTTTGATTTTTATGAAGTCACTTCAAAGACTCCAAATAGAGCAAGAGAAGCAATA  9287

Query  79    GCGCAAATGAAGGCTGCAGC  98
             ||||||||||| ||||||||
Sbjct  9288  GCGCAAATGAAAGCTGCAGC  9307


>gb|AY519365.1| Wisteria vein mosaic virus WVMV-BJ coat protein (CP) gene, partial 
cds
Length=1101

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 70/80 (87%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||| ||||||||||| || |||||| |  | |||||||| |||||||||
Sbjct  634  TATGCTTTTGATTTTTATGAAGTCACTTCAAAGACTCCAAATAGAGCAAGAGAAGCAATA  693

Query  79   GCGCAAATGAAGGCTGCAGC  98
            ||||||||||| ||||||||
Sbjct  694  GCGCAAATGAAAGCTGCAGC  713


>gb|DQ517431.1| Soybean mosaic virus isolate g coat protein gene, partial cds
Length=795

 Score = 73.8 bits (37),  Expect = 1e-10
 Identities = 70/81 (86%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   TATGCTTTCGATTTCTATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATA  78
            |||||||| ||||||||||| || || ||||| ||  |  |||| |||||||||||||||
Sbjct  583  TATGCTTTTGATTTCTATGAGGTTACTTCCAAAACACCAAACAGGGCAAGGGAAGCAATA  642

Query  79   GCGCAAATGAAGGCTGCAGCT  99
            ||||| |||||||||||||||
Sbjct  643  GCGCAGATGAAGGCTGCAGCT  663



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1960012
Number of extensions: 105908
Number of successful extensions: 30718
Number of sequences better than 10: 62
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 30716
Number of HSP's successfully gapped: 62
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY73BG51011


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|628-726
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   188    3e-45
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   172    2e-40
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   172    2e-40
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   165    4e-38
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   165    4e-38
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   165    4e-38
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   165    4e-38
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   165    4e-38
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   165    4e-38
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   165    4e-38
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   159    2e-36
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   157    9e-36
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   157    9e-36
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   157    9e-36
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   157    9e-36
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   157    9e-36
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   149    2e-33
gb|EF547367.1|  South African passiflora virus polyprotein gen...   135    3e-29
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   131    5e-28
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   131    5e-28
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   131    5e-28
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   121    5e-25
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   119    2e-24
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   119    2e-24
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   111    5e-22
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   111    5e-22
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  97.6    7e-18
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  95.6    3e-17
gb|EU334547.1|  Bituminaria bituminosa mosaic virus isolate Co...  85.7    3e-14
gb|DQ860147.1|  Florida passionflower potyvirus LAJ-2006 coat ...  79.8    2e-12
dbj|AB206834.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
dbj|AB206833.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
dbj|AB206832.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
dbj|AB206831.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
dbj|AB206830.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
gb|AY294045.1|  Soybean mosaic virus strain G7H, complete genome   79.8    2e-12
gb|AY294044.1|  Soybean mosaic virus strain G5, complete genome    79.8    2e-12
dbj|AB181493.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
gb|AY216987.1|  Soybean mosaic virus strain G7d polyprotein pr...  79.8    2e-12
gb|AY216010.1|  Soybean mosaic virus strain G7, complete sequence  79.8    2e-12
gb|AF242845.1|AF242845  Soybean mosaic virus G6 polyprotein ge...  79.8    2e-12
gb|AY216487.1|AY216486S2  Soybean mosaic virus strain 746 coat...  79.8    2e-12
emb|AJ609298.1|  Soybean mosaic virus partial mRNA for coat pr...  79.8    2e-12
gb|AF200578.1|AF200576S3  Soybean mosaic virus VA1 coat protei...  79.8    2e-12
gb|AF200569.1|AF200567S3  Soybean mosaic virus G6 coat protein...  79.8    2e-12
gb|AF200566.1|AF200564S3  Soybean mosaic virus G5 coat protein...  79.8    2e-12
gb|AF200563.1|AF200561S3  Soybean mosaic virus G3 coat protein...  79.8    2e-12
dbj|AB100443.1|  Soybean mosaic virus genomic RNA, complete ge...  79.8    2e-12
dbj|AB100442.1|  Soybean mosaic virus genomic RNA, complete ge...  79.8    2e-12
dbj|AB085900.1|  Soybean mosaic virus CP gene for coat protein...  79.8    2e-12
emb|AJ628751.1|  Soybean mosaic virus partial polyprotein gene...  75.8    3e-11
emb|AJ507388.2|SMO507388  Soybean mosaic virus gene for polypr...  75.8    3e-11
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  73.8    1e-10
gb|DQ517430.1|  Soybean mosaic virus isolate f coat protein ge...  71.9    4e-10
gb|DQ517428.1|  Soybean mosaic virus isolate b coat protein ge...  71.9    4e-10
gb|S42280.1|  SMV genome [soybean mosaic virus SMV, strain G2,...  71.9    4e-10
emb|AJ310200.1|SMO310200  Soybean mosaic virus genomic RNA for...  71.9    4e-10
gb|AY216483.1|AY216482S2  Soybean mosaic virus strain 413 coat...  71.9    4e-10
gb|AY216479.1|AY216478S2  Soybean mosaic virus strain 1071 coa...  71.9    4e-10
gb|AF241739.1|AF241739  Soybean mosaic virus G7 polyprotein ge...  71.9    4e-10
emb|AJ619757.1|  Soybean mosaic virus gene for polyprotein, ge...  71.9    4e-10
emb|AJ609297.1|  Soybean mosaic virus partial mRNA for coat pr...  71.9    4e-10
gb|AF200575.1|AF200573S3  Soybean mosaic virus G7F coat protei...  71.9    4e-10
gb|AF200572.1|AF200570S3  Soybean mosaic virus G7a coat protei...  71.9    4e-10
gb|AF200560.1|AF200558S3  Soybean mosaic virus G1 coat protein...  71.9    4e-10
gb|AF200554.1|AF200553S2  Soybean mosaic virus ChJ coat protei...  71.9    4e-10
gb|AF200543.1|SEG_SMCHGSI3  Soybean mosaic virus ChGs1 coat pr...  71.9    4e-10
dbj|AB100448.1|  Soybean mosaic virus gene for coat protein, p...  71.9    4e-10
dbj|AB100447.1|  Soybean mosaic virus gene for coat protein, p...  71.9    4e-10
dbj|AB100445.1|  Soybean mosaic virus gene for coat protein, p...  71.9    4e-10
dbj|D00507.2|SMVCPA  Soybean mosaic virus N genomic RNA, compl...  71.9    4e-10
dbj|D88615.1|  Soybean mosaic virus genomic RNA for virus coat...  71.9    4e-10
gb|DQ898208.1|  Hardenbergia mosaic virus isolate Wel-1 polypr...  69.9    2e-09
gb|DQ898201.1|  Hardenbergia mosaic virus isolate Med-7 polypr...  69.9    2e-09
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  69.9    2e-09
gb|DQ898195.1|  Hardenbergia mosaic virus isolate MU-1C polypr...  69.9    2e-09
gb|DQ898191.1|  Hardenbergia mosaic virus isolate Bun-9 polypr...  69.9    2e-09
gb|DQ517431.1|  Soybean mosaic virus isolate g coat protein ge...  69.9    2e-09
gb|AF242844.1|AF242844  Soybean mosaic virus Al5 polyprotein g...  69.9    2e-09
gb|AY216489.1|AY216488S2  Soybean mosaic virus strain 770 coat...  69.9    2e-09
emb|X63771.1|SMVCP  Soybean Mosaic Virus gene for coat protein     69.9    2e-09
gb|AF200581.1|AF200579S3  Soybean mosaic virus IL1 coat protei...  69.9    2e-09
gb|U25673.1|SMU25673  Soybean mosaic virus coat protein gene, ...  69.9    2e-09
gb|DQ898212.1|  Hardenbergia mosaic virus isolate MR-30 polypr...  67.9    7e-09
gb|DQ898211.1|  Hardenbergia mosaic virus isolate MR-3 polypro...  67.9    7e-09
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  67.9    7e-09
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  67.9    7e-09
gb|DQ360817.1|  Soybean mosaic virus isolate BZ polyprotein ge...  67.9    7e-09
emb|AJ628752.1|  Soybean mosaic virus partial polyprotein gene...  67.9    7e-09
gb|AY656816.1|  Wisteria vein mosaic virus isolate Beijing, co...  65.9    3e-08
emb|AJ579522.1|WMO579522  Watermelon mosaic virus partial gene...  65.9    3e-08
emb|AJ579502.1|WMO579502  Watermelon mosaic virus partial gene...  65.9    3e-08
dbj|AB100446.1|  Soybean mosaic virus gene for coat protein, p...  65.9    3e-08
gb|AY519365.1|  Wisteria vein mosaic virus WVMV-BJ coat protei...  65.9    3e-08
dbj|D88616.1|  Soybean mosaic virus genomic RNA for virus coat...  65.9    3e-08
gb|AY799852.1|  Soybean mosaic virus isolate 2K-38 coat protei...  63.9    1e-07
gb|AY216485.1|AY216484S2  Soybean mosaic virus strain 452 coat...  63.9    1e-07
gb|AY995215.1|  Watermelon mosaic virus polyprotein gene, part...  63.9    1e-07

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  628  TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  628  TATGAAGTCACGTCTAAGACTTCTGATAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct  871  TATGAAGTCACATCTAAGACTTCCGAAAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  930

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  931  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  969


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACGTCTAAGACTTCTGATAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACGTCTAAGACTTCTGATAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACGTCTAAGACTTCTGATAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  726


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct  628  TATGAAGTCACATCTAAGACTTCTGACAGAGCAAGGGAAGCAATAGCACAGATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||| ||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTCGGCCTG  726


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct  628  TATGAAGTCACATCTAAGACTTCTGACAGAGCAAGGGAAGCAATAGCACAGATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||| ||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTCGGCCTG  726


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct  631  TATGAAGTCACATCTAAGACTTCTGACAGAGCAAGGGAAGCAATAGCACAGATGAAGGCT  690

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||| ||||||
Sbjct  691  GCAGCTCTCGCCAACGTTAACACCAGGATGTTCGGCCTG  729


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct  631  TATGAAGTCACATCTAAGACTTCTGACAGAGCAAGGGAAGCAATAGCACAGATGAAGGCT  690

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||||||||||||| ||||||
Sbjct  691  GCAGCTCTCGCCAACGTTAACACCAGGATGTTCGGCCTG  729


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  656  TATGAGGTCACATCTAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAGATGAAGGCT  715

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||||||| |||||||||||||||||||||||
Sbjct  716  GCAGCTCTCGCCAACATTAACACCAGGATGTTTGGCCTG  754


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  159 bits (80),  Expect = 2e-36
 Identities = 92/96 (95%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            ||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACGTCTAAGACTTCTGATAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  96
            ||||||||||||||||||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  723


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  1088  TATGAAGTCACATCTAAGACTTCTGAGAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  1147

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
             ||||||||||| ||||| |||||||||||||||||||||
Sbjct  1148  GCAGCTCTCGCTAACGTCAACACCAGGATGTTTGGCCTG  1186


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACATCTAAGACTTCTGAGAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||| ||||| |||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCTAACGTCAACACCAGGATGTTTGGCCTG  726


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACATCTAAGACTTCTGAGAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||| ||||| |||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCTAACGTCAACACCAGGATGTTTGGCCTG  726


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  628  TATGAAGTCACATCTAAGACTTCTGAGAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  687

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||| ||||| |||||||||||||||||||||
Sbjct  688  GCAGCTCTCGCTAACGTCAACACCAGGATGTTTGGCCTG  726


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
            |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  640  TATGAAGTCACATCTAAGACTTCTGAGAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  699

Query  61   GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||| ||||| |||||||||||||||||||||
Sbjct  700  GCAGCTCTCGCTAACGTCAACACCAGGATGTTTGGCCTG  738


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||
Sbjct  1255  TATGAAGTCACATCTAAGACTTCCGAAAGAGCAAGGGAAGCAATAGCACAAATGAAGGCT  1314

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGCCTG  99
             |||||||||||||||| ||||||||| ||||||||||||
Sbjct  1315  GCAGCTCTCGCCAACGCTAACACCAGAATGTTTGGCCTG  1353


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  135 bits (68),  Expect = 3e-29
 Identities = 89/96 (92%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             ||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| || 
Sbjct  1240  TATGAGGTTACATCCAAAACTTCTGACAGAGCAAGGGAAGCAATAGCACAAATGAAAGCC  1299

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  96
             |||||||||||||||||||| |||||||||||||||
Sbjct  1300  GCAGCTCTCGCCAACGTTAAAACCAGGATGTTTGGC  1335


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  131 bits (66),  Expect = 5e-28
 Identities = 84/90 (93%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  10    ACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||||||| |||||||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct  9046  ACATCCAAAACTTCTGATAGAGCAAGAGAAGCAATAGCACAAATGAAGGCCGCAGCTCTC  9105

Query  70    GCCAACGTTAACACCAGGATGTTTGGCCTG  99
             |||||||| |||||||||||||||||||||
Sbjct  9106  GCCAACGTAAACACCAGGATGTTTGGCCTG  9135


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  131 bits (66),  Expect = 5e-28
 Identities = 84/90 (93%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  10   ACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct  877  ACATCCAAAACCTCTGATAGAGCAAGAGAAGCAATAGCGCAAATGAAGGCCGCAGCTCTC  936

Query  70   GCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||| |||||||||||||||||||||
Sbjct  937  GCCAACGTAAACACCAGGATGTTTGGCCTG  966


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  131 bits (66),  Expect = 5e-28
 Identities = 84/90 (93%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  10   ACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||||||| |||||||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct  802  ACATCCAAAACTTCTGATAGAGCAAGAGAAGCAATAGCACAAATGAAGGCCGCAGCTCTC  861

Query  70   GCCAACGTTAACACCAGGATGTTTGGCCTG  99
            |||||||| |||||||||||||||||||||
Sbjct  862  GCCAACGTAAACACCAGGATGTTTGGCCTG  891


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 73/77 (94%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  23   CTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACA  82
            |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||
Sbjct  650  CTGATAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTTTCGCCAACGTAATCA  709

Query  83   CCAGGATGTTTGGCCTG  99
            |||||||||||||||||
Sbjct  710  CCAGGATGTTTGGCCTG  726


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 78/84 (92%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   AAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAAC  75
            |||| ||| ||||||||||||||||||||||| || ||||||| ||||||| ||||||||
Sbjct  671  AAGATTTCCGACAGAGCAAGGGAAGCAATAGCCCAGATGAAGGTTGCAGCTTTCGCCAAC  730

Query  76   GTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||||||||||||||||
Sbjct  731  GTTAACACCAGGATGTTTGGCCTG  754


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 78/84 (92%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   AAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAAC  75
            |||| ||| ||||||||||||||||||||||| || ||||||| ||||||| ||||||||
Sbjct  646  AAGATTTCCGACAGAGCAAGGGAAGCAATAGCCCAGATGAAGGTTGCAGCTTTCGCCAAC  705

Query  76   GTTAACACCAGGATGTTTGGCCTG  99
            ||||||||||||||||||||||||
Sbjct  706  GTTAACACCAGGATGTTTGGCCTG  729


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 86/96 (89%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             ||||| || |||||||| ||| ||||||||||||||||||||||||| |||||||| || 
Sbjct  979   TATGAGGTTACATCCAAAACTCCTGACAGAGCAAGGGAAGCAATAGCACAAATGAAAGCC  1038

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  96
             |||  ||||||||||||||| |||||||||||||||
Sbjct  1039  GCACGTCTCGCCAACGTTAATACCAGGATGTTTGGC  1074


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 86/96 (89%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             ||||| || |||||||| ||| ||||||||||||||||||||||||| |||||||| || 
Sbjct  979   TATGAGGTTACATCCAAAACTCCTGACAGAGCAAGGGAAGCAATAGCACAAATGAAAGCC  1038

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  96
             |||  ||||||||||||||| |||||||||||||||
Sbjct  1039  GCACGTCTCGCCAACGTTAATACCAGGATGTTTGGC  1074


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 97.6 bits (49),  Expect = 7e-18
 Identities = 73/81 (90%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   ACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTT  78
            |||||||| |||||| | ||||||||||| |||||||| || ||||| ||||| ||||||
Sbjct  691  ACTTCTGATAGAGCACGAGAAGCAATAGCACAAATGAAAGCAGCAGCCCTCGCAAACGTT  750

Query  79   AACACCAGGATGTTTGGCCTG  99
            |||||||||||||||||||||
Sbjct  751  AACACCAGGATGTTTGGCCTG  771


>gb|EU334546.1| Psoralea bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 72/80 (90%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  16    AAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAAC  75
             |||||||| |||||||| || |||||| | |||||||||||||| ||||| |||||||||
Sbjct  1228  AAGACTTCAGACAGAGCCAGAGAAGCAGTCGCGCAAATGAAGGCGGCAGCCCTCGCCAAC  1287

Query  76    GTTAACACCAGGATGTTTGG  95
             |||||||||||| |||||||
Sbjct  1288  GTTAACACCAGGTTGTTTGG  1307


>gb|EU334547.1| Bituminaria bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 82/95 (86%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  1     TATGAAGTCACATCCAAGACTTCTGACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCT  60
             ||||||||||  || |||||||| || ||||| || |||||| | ||||| |||||||| 
Sbjct  1213  TATGAAGTCAACTCAAAGACTTCAGATAGAGCCAGAGAAGCAGTCGCGCAGATGAAGGCG  1272

Query  61    GCAGCTCTCGCCAACGTTAACACCAGGATGTTTGG  95
             ||||| ||||||||||||||||||||| |||||||
Sbjct  1273  GCAGCCCTCGCCAACGTTAACACCAGGTTGTTTGG  1307


>gb|DQ860147.1| Florida passionflower potyvirus LAJ-2006 coat protein gene, partial 
cds
Length=1439

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 61/68 (89%), Gaps = 0/68 (0%)
 Strand=Plus/Plus

Query  28    AGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGG  87
             ||||| || |||||| | |||||||||||||| ||||| |||||||||||||||||||||
Sbjct  1248  AGAGCCAGAGAAGCAGTTGCGCAAATGAAGGCAGCAGCCCTCGCCAACGTTAACACCAGG  1307

Query  88    ATGTTTGG  95
              |||||||
Sbjct  1308  TTGTTTGG  1315


>dbj|AB206834.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Ok2
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>dbj|AB206833.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Tk-1
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>dbj|AB206832.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
To2
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>dbj|AB206831.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Hi1
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>dbj|AB206830.1| Soybean mosaic virus CP gene for coat protein, partial cds, isolate: 
Ok1
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>gb|AY294045.1| Soybean mosaic virus strain G7H, complete genome
Length=9588

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26    ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  9160  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  9203


>gb|AY294044.1| Soybean mosaic virus strain G5, complete genome
Length=9588

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26    ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  9160  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  9203


>dbj|AB181493.1| Soybean mosaic virus CP gene for coat protein, partial cds, strain: 
D
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>gb|AY216987.1| Soybean mosaic virus strain G7d polyprotein precursor, mRNA, 
complete cds
Length=9588

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26    ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  9160  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  9203


>gb|AY216010.1| Soybean mosaic virus strain G7, complete sequence
Length=9588

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26    ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  9160  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  9203


>gb|AF242845.1|AF242845 Soybean mosaic virus G6 polyprotein gene, partial cds
Length=1155

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  729  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  772


>gb|AY216487.1|AY216486S2 Soybean mosaic virus strain 746 coat protein gene, partial cds
Length=895

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  694  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  737


>emb|AJ609298.1| Soybean mosaic virus partial mRNA for coat protein (CP gene), 
isolate CN3
Length=798

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  623  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  666


>gb|AF200578.1|AF200576S3 Soybean mosaic virus VA1 coat protein gene, partial cds
Length=810

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  649  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  692


>gb|AF200569.1|AF200567S3 Soybean mosaic virus G6 coat protein gene, partial cds
Length=925

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  707  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  750


>gb|AF200566.1|AF200564S3 Soybean mosaic virus G5 coat protein gene, partial cds
Length=918

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  708  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  751


>gb|AF200563.1|AF200561S3 Soybean mosaic virus G3 coat protein gene, partial cds
Length=926

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26   ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  708  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  751


>dbj|AB100443.1| Soybean mosaic virus genomic RNA, complete genome, isolate:Aa15-M2
Length=9588

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 43/44 (97%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  26    ACAGAGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  69
             |||| |||||||||||||||||||||||||||||||||||||||
Sbjct  9160  ACAGGGCAAGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTC  9203



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 2125062
Number of extensions: 135014
Number of successful extensions: 44675
Number of sequences better than 10: 14
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 44675
Number of HSP's successfully gapped: 14
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY7ZMCXM014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|661-759
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   196    1e-47
gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   188    3e-45
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   188    3e-45
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   188    3e-45
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   188    3e-45
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   180    6e-43
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   174    4e-41
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   172    2e-40
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   172    2e-40
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   172    2e-40
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   172    2e-40
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   172    2e-40
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   172    2e-40
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   165    4e-38
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   165    4e-38
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   165    4e-38
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   165    4e-38
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   165    4e-38
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   165    4e-38
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   161    6e-37
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   161    6e-37
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   159    2e-36
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   143    1e-31
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   143    1e-31
gb|EF547367.1|  South African passiflora virus polyprotein gen...   141    5e-31
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   127    8e-27
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   125    3e-26
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   125    3e-26
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  95.6    3e-17
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  95.6    3e-17
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  95.6    3e-17
gb|DQ860147.1|  Florida passionflower potyvirus LAJ-2006 coat ...  95.6    3e-17
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...  95.6    3e-17
gb|DQ898208.1|  Hardenbergia mosaic virus isolate Wel-1 polypr...  93.7    1e-16
gb|DQ898201.1|  Hardenbergia mosaic virus isolate Med-7 polypr...  93.7    1e-16
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  93.7    1e-16
gb|DQ898195.1|  Hardenbergia mosaic virus isolate MU-1C polypr...  93.7    1e-16
gb|DQ898191.1|  Hardenbergia mosaic virus isolate Bun-9 polypr...  93.7    1e-16
gb|EU334547.1|  Bituminaria bituminosa mosaic virus isolate Co...  87.7    7e-15
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  87.7    7e-15
gb|DQ898211.1|  Hardenbergia mosaic virus isolate MR-3 polypro...  87.7    7e-15
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  87.7    7e-15
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  87.7    7e-15
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...  87.7    7e-15
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  87.7    7e-15
gb|DQ898212.1|  Hardenbergia mosaic virus isolate MR-30 polypr...  79.8    2e-12
gb|DQ898210.1|  Hardenbergia mosaic virus isolate KiP-1 polypr...  79.8    2e-12
gb|DQ898209.1|  Hardenbergia mosaic virus isolate He-1 polypro...  79.8    2e-12
gb|DQ898207.1|  Hardenbergia mosaic virus isolate WHP-2 polypr...  79.8    2e-12
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  79.8    2e-12
gb|DQ898193.1|  Hardenbergia mosaic virus isolate He-2 polypro...  79.8    2e-12
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  79.8    2e-12
dbj|AB206834.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
dbj|AB206833.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
dbj|AB206832.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
dbj|AB206831.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
dbj|AB206830.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
gb|AY294045.1|  Soybean mosaic virus strain G7H, complete genome   71.9    4e-10
gb|AY294044.1|  Soybean mosaic virus strain G5, complete genome    71.9    4e-10
dbj|AB181493.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
gb|AY216987.1|  Soybean mosaic virus strain G7d polyprotein pr...  71.9    4e-10
gb|AY216010.1|  Soybean mosaic virus strain G7, complete sequence  71.9    4e-10
gb|AF242845.1|AF242845  Soybean mosaic virus G6 polyprotein ge...  71.9    4e-10
gb|AY216487.1|AY216486S2  Soybean mosaic virus strain 746 coat...  71.9    4e-10
emb|AJ609298.1|  Soybean mosaic virus partial mRNA for coat pr...  71.9    4e-10
gb|AF200578.1|AF200576S3  Soybean mosaic virus VA1 coat protei...  71.9    4e-10
gb|AF200569.1|AF200567S3  Soybean mosaic virus G6 coat protein...  71.9    4e-10
gb|AF200566.1|AF200564S3  Soybean mosaic virus G5 coat protein...  71.9    4e-10
gb|AF200563.1|AF200561S3  Soybean mosaic virus G3 coat protein...  71.9    4e-10
dbj|AB100443.1|  Soybean mosaic virus genomic RNA, complete ge...  71.9    4e-10
dbj|AB100442.1|  Soybean mosaic virus genomic RNA, complete ge...  71.9    4e-10
dbj|AB085900.1|  Soybean mosaic virus CP gene for coat protein...  71.9    4e-10
gb|DQ925418.1|  Bean common mosaic virus strain peanut stripe ...  69.9    2e-09
emb|AJ889245.1|  Bean common mosaic virus partial gene for pol...  69.9    2e-09
gb|AY748919.1|  Bean common mosaic virus isolate BCMV-pnut pol...  69.9    2e-09
gb|AY748918.1|  Bean common mosaic virus isolate BCMV-pst poly...  69.9    2e-09
gb|DQ367846.1|  Peanut stripe virus coat protein gene, partial...  69.9    2e-09
emb|AJ851894.1|  Peanut stripe virus partial CP gene for coat ...  69.9    2e-09
gb|AF200624.1|AF200624  Peanut stripe virus clone SN-Nib3 pol ...  69.9    2e-09
gb|AF200623.1|AF200623  Peanut stripe virus clone SN-Nib2 pol ...  69.9    2e-09
gb|AF191748.1|AF191748  Peanut stripe virus severe necrotic st...  69.9    2e-09
emb|Z21700.1|PSV3TERM  Peanut stripe virus 370 capsid protein      69.9    2e-09
emb|Y11775.1|PSVNIB399  Peanut stripe virus RNA for NIb protei...  69.9    2e-09
emb|Y11776.1|PSVNIBT1  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|Y11774.1|PSVNIBT7  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|Y11773.1|PSVNIBT6  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|Y11771.1|PSVNIBT3  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|AJ132158.1|PST132158  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132156.1|PST132156  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132155.1|PST132155  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132154.1|PST132154  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132153.1|PST132153  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132152.1|PST132152  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132151.1|PST132151  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132150.1|PST132150  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132149.1|PST132149  Peanut stripe virus polyprotein gene...  69.9    2e-09
gb|AF079116.1|AF079116  Peanut stripe virus coat protein gene,...  69.9    2e-09
gb|U34972.1|PSU34972  Peanut stripe virus mRNA polyprotein mRN...  69.9    2e-09
gb|U05771.1|PSU05771  Peanut stripe virus, complete genome         69.9    2e-09

ALIGNMENTS
>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  904   AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  963

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||||||||||||| ||||||||||||||||||||||||
Sbjct  964   GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  1002


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct  689  AGGGAAGCAATAGCGCAGATGAAGGCTGCAGCTCTCGCCAACATTAACACCAGGATGTTT  748

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  749  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  787


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  174 bits (88),  Expect = 4e-41
 Identities = 94/96 (97%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAAC  96
            ||||||||||| ||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGAAATGTGGCAACAACTAGTGAGAAC  756


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||  ||||||||||||||||||||||||||||||||||
Sbjct  721  GGCTCGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct  661  AGGGAAGCAATAGCACAGATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTC  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct  661  AGGGAAGCAATAGCACAGATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTC  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||
Sbjct  661  AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTTTCGCCAACGTAATCACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  759


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct  664  AGGGAAGCAATAGCACAGATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTC  723

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  724  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  762


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct  664  AGGGAAGCAATAGCACAGATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTC  723

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  724  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  762


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct  1121  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCTAACGTCAACACCAGGATGTTT  1180

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||||||||||||| ||||||||||||||||||||||||
Sbjct  1181  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  1219


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCTAACGTCAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCTAACGTCAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  759


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct  661  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCTAACGTCAACACCAGGATGTTT  720

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  721  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  759


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct  1288  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCCAACGCTAACACCAGAATGTTT  1347

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||||||||||||| ||||||||||||||||||||||||
Sbjct  1348  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  1386


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct  673  AGGGAAGCAATAGCACAAATGAAGGCTGCAGCTCTCGCTAACGTCAACACCAGGATGTTT  732

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||| ||||||||||||||||||||||||
Sbjct  733  GGCCTGGATGGGAACGTGGCAACAACTAGTGAGAACACT  771


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct  689  AGGGAAGCAATAGCCCAGATGAAGGTTGCAGCTTTCGCCAACGTTAACACCAGGATGTTT  748

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACA  97
            |||||||||||||||||||||||||||||||||||||
Sbjct  749  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACA  785


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct  664  AGGGAAGCAATAGCCCAGATGAAGGTTGCAGCTTTCGCCAACGTTAACACCAGGATGTTT  723

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACA  97
            |||||||||||||||||||||||||||||||||||||
Sbjct  724  GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACA  760


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  159 bits (80),  Expect = 2e-36
 Identities = 92/96 (95%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct  904  GAAGCAATAGCGCAAATGAAGGCCGCAGCTCTCGCCAACGTAAACACCAGGATGTTTGGC  963

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||||||||||| |||||||||| |||||||||||||
Sbjct  964  CTGGATGGGAACGTGGCAACAATTAGTGAGAACACT  999


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 90/96 (93%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4     GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
             ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct  9073  GAAGCAATAGCACAAATGAAGGCCGCAGCTCTCGCCAACGTAAACACCAGGATGTTTGGC  9132

Query  64    CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||||||| |||||||||  |||||||||||||
Sbjct  9133  CTGGATGGGAACGTGGCAACAGTTAGTGAGAACACT  9168


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 90/96 (93%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct  829  GAAGCAATAGCACAAATGAAGGCCGCAGCTCTCGCCAACGTAAACACCAGGATGTTTGGC  888

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||||||||||| |||||||||  |||||||||||||
Sbjct  889  CTGGATGGGAACGTGGCAACAGTTAGTGAGAACACT  924


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||
Sbjct  1273  AGGGAAGCAATAGCACAAATGAAAGCCGCAGCTCTCGCCAACGTTAAAACCAGGATGTTT  1332

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||| ||||||| || ||||||||||||||||||||||||
Sbjct  1333  GGCTTGGATGGAAACGTGGCAACAACTAGTGAGAACACT  1371


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            ||||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct  709  GAAGCAATAGCACAAATGAAAGCAGCAGCCCTCGCAAACGTTAACACCAGGATGTTTGGC  768

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||| || || |||||||||||||||||||||
Sbjct  769  CTGGATGGAAACGTTGCAACAACTAGTGAGAACACT  804


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             |||||||||||||| |||||||| || |||  ||||||||||||||| ||||||||||||
Sbjct  1012  AGGGAAGCAATAGCACAAATGAAAGCCGCACGTCTCGCCAACGTTAATACCAGGATGTTT  1071

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||| ||||||| || ||||||||||||||||||||||||
Sbjct  1072  GGCTTGGATGGAAACGTGGCAACAACTAGTGAGAACACT  1110


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
             |||||||||||||| |||||||| || |||  ||||||||||||||| ||||||||||||
Sbjct  1012  AGGGAAGCAATAGCACAAATGAAAGCCGCACGTCTCGCCAACGTTAATACCAGGATGTTT  1071

Query  61    GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||| ||||||| || ||||||||||||||||||||||||
Sbjct  1072  GGCTTGGATGGAAACGTGGCAACAACTAGTGAGAACACT  1110


>gb|EU334546.1| Psoralea bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 81/92 (88%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  4     GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
             |||||| | |||||||||||||| ||||| ||||||||||||||||||||| ||||||| 
Sbjct  1249  GAAGCAGTCGCGCAAATGAAGGCGGCAGCCCTCGCCAACGTTAACACCAGGTTGTTTGGA  1308

Query  64    CTGGATGGGAATGTGGCAACAACTAGTGAGAA  95
             || ||||| || |||||||| ||||| |||||
Sbjct  1309  CTTGATGGAAACGTGGCAACCACTAGCGAGAA  1340


>gb|DQ898199.1| Hardenbergia mosaic virus isolate MR-21 polyprotein gene, partial 
cds
Length=834

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 84/96 (87%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||||| ||||||||||
Sbjct  670  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACCAAGATGTTTGGC  729

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| ||||||| ||| |||||||||
Sbjct  730  TTGGATGGAAATGTTGCAACAATTAGCGAGAACACT  765


>gb|DQ898198.1| Hardenbergia mosaic virus isolate MR-13 polyprotein gene, partial 
cds
Length=834

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 84/96 (87%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||||| ||||||||||
Sbjct  670  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACCAAGATGTTTGGC  729

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| ||||||| ||| |||||||||
Sbjct  730  TTGGATGGAAATGTTGCAACAATTAGCGAGAACACT  765


>gb|DQ860147.1| Florida passionflower potyvirus LAJ-2006 coat protein gene, partial 
cds
Length=1439

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 72/80 (90%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  4     GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
             |||||| | |||||||||||||| ||||| ||||||||||||||||||||| ||||||| 
Sbjct  1257  GAAGCAGTTGCGCAAATGAAGGCAGCAGCCCTCGCCAACGTTAACACCAGGTTGTTTGGA  1316

Query  64    CTGGATGGGAATGTGGCAAC  83
             || ||||| |||||||||||
Sbjct  1317  CTTGATGGAAATGTGGCAAC  1336


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 84/96 (87%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            ||||||||||| |||||||| || ||||| ||  | ||||||||||| ||||||||||||
Sbjct  856  GAAGCAATAGCACAAATGAAAGCGGCAGCCCTGTCGAACGTTAACACTAGGATGTTTGGC  915

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||| || || || ||||||||||||||||||
Sbjct  916  CTGGATGGAAACGTCGCGACAACTAGTGAGAACACT  951


>gb|DQ898208.1| Hardenbergia mosaic virus isolate Wel-1 polyprotein gene, partial 
cds
Length=822

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 86/99 (86%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||| | |||||
Sbjct  655  AGGGAAGCAGTAGCGCAGATGAAGGCTGCAGCTCTCAGCAATGTTAACACCAAGTTGTTT  714

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||| ||||||| ||| | |||||||| || |||||||||
Sbjct  715  GGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACT  753


>gb|DQ898201.1| Hardenbergia mosaic virus isolate Med-7 polyprotein gene, partial 
cds
Length=822

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 86/99 (86%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||| | |||||
Sbjct  655  AGGGAAGCAGTAGCGCAGATGAAGGCTGCAGCTCTCAGCAATGTTAACACCAAGTTGTTT  714

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||| ||||||| ||| | |||||||| || |||||||||
Sbjct  715  GGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACT  753


>gb|DQ898196.1| Hardenbergia mosaic virus isolate MU-2A polyprotein gene, partial 
cds
Length=822

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 86/99 (86%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||| | |||||
Sbjct  655  AGGGAAGCAGTAGCGCAGATGAAGGCTGCAGCTCTCAGCAATGTTAACACCAAGTTGTTT  714

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||| ||||||| ||| | |||||||| || |||||||||
Sbjct  715  GGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACT  753


>gb|DQ898195.1| Hardenbergia mosaic virus isolate MU-1C polyprotein gene, partial 
cds
Length=822

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 86/99 (86%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||| | |||||
Sbjct  655  AGGGAAGCAGTAGCGCAGATGAAGGCTGCAGCTCTCAGCAATGTTAACACCAAGTTGTTT  714

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||| ||||||| ||| | |||||||| || |||||||||
Sbjct  715  GGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACT  753


>gb|DQ898191.1| Hardenbergia mosaic virus isolate Bun-9 polyprotein gene, partial 
cds
Length=822

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 86/99 (86%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    AGGGAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTT  60
            ||||||||| ||||||| ||||||||||||||||||  ||| |||||||||| | |||||
Sbjct  655  AGGGAAGCAGTAGCGCAGATGAAGGCTGCAGCTCTCAGCAATGTTAACACCAAGTTGTTT  714

Query  61   GGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            ||| ||||||| ||| | |||||||| || |||||||||
Sbjct  715  GGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACT  753


>gb|EU334547.1| Bituminaria bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 71/80 (88%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  4     GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
             |||||| | ||||| |||||||| ||||| ||||||||||||||||||||| ||||||| 
Sbjct  1249  GAAGCAGTCGCGCAGATGAAGGCGGCAGCCCTCGCCAACGTTAACACCAGGTTGTTTGGA  1308

Query  64    CTGGATGGGAATGTGGCAAC  83
             || ||||| |||||||||||
Sbjct  1309  CTTGATGGAAATGTGGCAAC  1328


>gb|EF375607.1| Hardenbergia mosaic virus isolate Can1-1 coat protein gene, partial 
cds
Length=822

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 83/96 (86%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  |||||||||||| | | ||||||||
Sbjct  664  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAACGTTAACACTAAGTTGTTTGGC  723

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||||||||| || |||||||| || |||||||||
Sbjct  724  TTGGATGGGAACGTTGCAACAACCAGCGAGAACACT  759


>gb|DQ898211.1| Hardenbergia mosaic virus isolate MR-3 polyprotein gene, partial 
cds
Length=834

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 83/96 (86%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||||| ||||||||||
Sbjct  670  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACCAAGATGTTTGGC  729

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| |||||||  || |||||||||
Sbjct  730  TTGGATGGAAATGTTGCAACAATCAGCGAGAACACT  765


>gb|DQ898206.1| Hardenbergia mosaic virus isolate WHP-1 polyprotein gene, partial 
cds
Length=828

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 83/96 (86%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  |||||||||||| | | ||||||||
Sbjct  664  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAACGTTAACACTAAGTTGTTTGGC  723

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||||||||| || |||||||| || |||||||||
Sbjct  724  TTGGATGGGAACGTTGCAACAACCAGCGAGAACACT  759


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 56/60 (93%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  40   AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  775  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  834


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 56/60 (93%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  40   AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  799  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  858


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 56/60 (93%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  40   AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  763  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  822


>gb|DQ898212.1| Hardenbergia mosaic virus isolate MR-30 polyprotein gene, partial 
cds
Length=834

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 82/96 (85%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||||| ||||||||||
Sbjct  670  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACCAAGATGTTTGGC  729

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             |||| || ||||| |||||||  || |||||||||
Sbjct  730  TTGGACGGAAATGTTGCAACAATCAGCGAGAACACT  765


>gb|DQ898210.1| Hardenbergia mosaic virus isolate KiP-1 polyprotein gene, partial 
cds
Length=828

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 82/96 (85%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||| | | ||||||||
Sbjct  664  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACTAAGTTGTTTGGC  723

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| |||||||| || |||||||||
Sbjct  724  TTGGATGGTAATGTTGCAACAACCAGCGAGAACACT  759


>gb|DQ898209.1| Hardenbergia mosaic virus isolate He-1 polyprotein gene, partial 
cds
Length=828

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 82/96 (85%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||| | | ||||||||
Sbjct  664  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACTAAGTTGTTTGGC  723

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| |||||||| || |||||||||
Sbjct  724  TTGGATGGTAATGTTGCAACAACCAGCGAGAACACT  759


>gb|DQ898207.1| Hardenbergia mosaic virus isolate WHP-2 polyprotein gene, partial 
cds
Length=828

 Score = 79.8 bits (40),  Expect = 2e-12
 Identities = 82/96 (85%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  4    GAAGCAATAGCGCAAATGAAGGCTGCAGCTCTCGCCAACGTTAACACCAGGATGTTTGGC  63
            |||||| ||||||| ||||| ||||||||||||  ||| |||||||| | | ||||||||
Sbjct  664  GAAGCAGTAGCGCAGATGAAAGCTGCAGCTCTCAGCAATGTTAACACTAAGTTGTTTGGC  723

Query  64   CTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  99
             ||||||| ||||| |||||||| || |||||||||
Sbjct  724  TTGGATGGTAATGTTGCAACAACCAGCGAGAACACT  759



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1933334
Number of extensions: 88014
Number of successful extensions: 22867
Number of sequences better than 10: 15
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 22867
Number of HSP's successfully gapped: 15
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY81YUVP014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|694-792
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   186    1e-44
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   180    6e-43
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   178    3e-42
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   178    3e-42
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   178    3e-42
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   178    3e-42
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   172    2e-40
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   170    6e-40
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   165    4e-38
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   165    4e-38
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   165    4e-38
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   165    4e-38
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   165    4e-38
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   161    6e-37
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   157    9e-36
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   151    6e-34
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   149    2e-33
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   149    2e-33
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   149    2e-33
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   149    2e-33
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   149    2e-33
gb|EF547367.1|  South African passiflora virus polyprotein gen...   141    5e-31
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   141    5e-31
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   141    5e-31
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   141    5e-31
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   133    1e-28
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   129    2e-27
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   129    2e-27
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   129    2e-27
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   129    2e-27
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   125    3e-26
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   125    3e-26
gb|EU334547.1|  Bituminaria bituminosa mosaic virus isolate Co...  87.7    7e-15
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  87.7    7e-15
gb|DQ860147.1|  Florida passionflower potyvirus LAJ-2006 coat ...  87.7    7e-15
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  85.7    3e-14
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  85.7    3e-14
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  77.8    7e-12
gb|DQ898211.1|  Hardenbergia mosaic virus isolate MR-3 polypro...  77.8    7e-12
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  77.8    7e-12
gb|AF328760.1|AF328760  Bean common mosaic necrosis virus isol...  71.9    4e-10
gb|AF328758.1|AF328758  Bean common mosaic necrosis virus isol...  71.9    4e-10
gb|AF328754.1|AF328754  Bean common mosaic necrosis virus isol...  71.9    4e-10
gb|AF328752.1|AF328752  Bean common mosaic necrosis virus isol...  71.9    4e-10
gb|DQ898212.1|  Hardenbergia mosaic virus isolate MR-30 polypr...  69.9    2e-09
gb|DQ898210.1|  Hardenbergia mosaic virus isolate KiP-1 polypr...  69.9    2e-09
gb|DQ898209.1|  Hardenbergia mosaic virus isolate He-1 polypro...  69.9    2e-09
gb|DQ898208.1|  Hardenbergia mosaic virus isolate Wel-1 polypr...  69.9    2e-09
gb|DQ898207.1|  Hardenbergia mosaic virus isolate WHP-2 polypr...  69.9    2e-09
gb|DQ898201.1|  Hardenbergia mosaic virus isolate Med-7 polypr...  69.9    2e-09
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  69.9    2e-09
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  69.9    2e-09
gb|DQ898195.1|  Hardenbergia mosaic virus isolate MU-1C polypr...  69.9    2e-09
gb|DQ898193.1|  Hardenbergia mosaic virus isolate He-2 polypro...  69.9    2e-09
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  69.9    2e-09
gb|DQ925418.1|  Bean common mosaic virus strain peanut stripe ...  69.9    2e-09
emb|AJ889245.1|  Bean common mosaic virus partial gene for pol...  69.9    2e-09
gb|AY748919.1|  Bean common mosaic virus isolate BCMV-pnut pol...  69.9    2e-09
gb|AY748918.1|  Bean common mosaic virus isolate BCMV-pst poly...  69.9    2e-09
gb|DQ367846.1|  Peanut stripe virus coat protein gene, partial...  69.9    2e-09
gb|DQ098901.1|  Siratro 2 virus Y polyprotein gene, partial cds    69.9    2e-09
emb|AJ851894.1|  Peanut stripe virus partial CP gene for coat ...  69.9    2e-09
gb|AF200624.1|AF200624  Peanut stripe virus clone SN-Nib3 pol ...  69.9    2e-09
gb|AF200623.1|AF200623  Peanut stripe virus clone SN-Nib2 pol ...  69.9    2e-09
gb|AF191748.1|AF191748  Peanut stripe virus severe necrotic st...  69.9    2e-09
emb|Z21700.1|PSV3TERM  Peanut stripe virus 370 capsid protein      69.9    2e-09
emb|Y11775.1|PSVNIB399  Peanut stripe virus RNA for NIb protei...  69.9    2e-09
emb|Y11774.1|PSVNIBT7  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|Y11773.1|PSVNIBT6  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|Y11771.1|PSVNIBT3  Peanut stripe virus RNA for NIb protein...  69.9    2e-09
emb|AJ132158.1|PST132158  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132156.1|PST132156  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132155.1|PST132155  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132154.1|PST132154  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132153.1|PST132153  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132152.1|PST132152  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132151.1|PST132151  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132150.1|PST132150  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132149.1|PST132149  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132148.1|PST132148  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132147.1|PST132147  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132146.1|PST132146  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132145.1|PST132145  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132144.1|PST132144  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|X63559.1|PSTVCP  Peanut stripe virus gene for capsid protein   69.9    2e-09
gb|AF079116.1|AF079116  Peanut stripe virus coat protein gene,...  69.9    2e-09
gb|U34972.1|PSU34972  Peanut stripe virus mRNA polyprotein mRN...  69.9    2e-09
gb|U05771.1|PSU05771  Peanut stripe virus, complete genome         69.9    2e-09
emb|Y11776.1|PSVNIBT1  Peanut stripe virus RNA for NIb protein...  65.9    3e-08
gb|DQ898202.1|  Hardenbergia mosaic virus isolate Sb-19-1 poly...  63.9    1e-07
gb|AY864314.2|  Bean common mosaic necrosis virus strain NL-3 ...  63.9    1e-07
gb|AY138897.1|  Bean common mosaic necrosis virus polyprotein ...  63.9    1e-07
gb|AY282577.1|  Bean common mosaic necrosis virus strain NL-3 ...  63.9    1e-07
gb|U19287.1|BCU19287  Bean common mosaic necrosis virus polypr...  63.9    1e-07
gb|AF361336.1|  Bean common mosaic virus isolate 93/0097 polyp...  63.9    1e-07
emb|Z17203.1|BCMVNL3CP  Bean common mosaic virus NL-3 coat pro...  63.9    1e-07
gb|AF073380.1|AF073380  Peanut stripe virus polyprotein gene, ...  63.9    1e-07
gb|U37076.1|BCU37076  Bean common mosaic necrosis virus strain...  63.9    1e-07
gb|U20818.1|BCU20818  Bean common mosaic virus polyprotein gen...  63.9    1e-07

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  792


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  186 bits (94),  Expect = 1e-44
 Identities = 97/98 (98%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAA  98
            ||||||||||||||||||||||||| ||||||||||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGATGTTAATCAGAA  791


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  722  CTCGCCAACATTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  781

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            ||||||||||||||||||||||||| |||||||||||||
Sbjct  782  AACACTGAGAGGCACACTGCCACTGATGTTAATCAGAAC  820


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  178 bits (90),  Expect = 3e-42
 Identities = 96/98 (97%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAA  98
            ||||||||||||||||||||||||| ||||| ||||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGATGTTAGTCAGAA  791


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  178 bits (90),  Expect = 3e-42
 Identities = 96/98 (97%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAA  98
            ||||||||||||||||||||||||| ||||| ||||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGATGTTAGTCAGAA  791


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  178 bits (90),  Expect = 3e-42
 Identities = 96/98 (97%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  2    TCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  723  TCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  782

Query  62   ACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            ||| |||||||||||||||||||| |||||||||||||
Sbjct  783  ACAATGAGAGGCACACTGCCACTGATGTTAATCAGAAC  820


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  178 bits (90),  Expect = 3e-42
 Identities = 96/98 (97%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  2    TCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  698  TCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  757

Query  62   ACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            ||| |||||||||||||||||||| |||||||||||||
Sbjct  758  ACAATGAGAGGCACACTGCCACTGATGTTAATCAGAAC  795


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 90/91 (98%), Gaps = 0/91 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTA  91
            ||||||||||||||||||||||||| |||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGATGTTA  784


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  170 bits (86),  Expect = 6e-40
 Identities = 95/98 (96%), Gaps = 0/98 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCTCGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAA  98
            ||||||||||||||||||||||||| ||||||||||||
Sbjct  754  AACACTGAGAGGCACACTGCCACTGATGTTAATCAGAA  791


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTCGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  754  AACACTGAGAGGCACACTGCTACTGATGTCAATCAGAAC  792


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTCGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  754  AACACTGAGAGGCACACTGCTACTGATGTCAATCAGAAC  792


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  697  CTCGCCAACGTTAACACCAGGATGTTCGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  756

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  757  AACACTGAGAGGCACACTGCTACTGATGTCAATCAGAAC  795


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  697  CTCGCCAACGTTAACACCAGGATGTTCGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  756

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  757  AACACTGAGAGGCACACTGCTACTGATGTCAATCAGAAC  795


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  937   CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  996

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             ||||||||||||||||||||| ||| ||| |||||||||
Sbjct  997   AACACTGAGAGGCACACTGCCGCTGATGTGAATCAGAAC  1035


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  2    TCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  61
            |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  695  TCGCCAACGTAATCACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGA  754

Query  62   ACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAA  98
            |||||||| ||||||||||||||| ||||||||||||
Sbjct  755  ACACTGAGCGGCACACTGCCACTGATGTTAATCAGAA  791


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct  1321  CTCGCCAACGCTAACACCAGAATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  1380

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             ||||||||||||||||||||||||| ||| |||||||||
Sbjct  1381  AACACTGAGAGGCACACTGCCACTGATGTGAATCAGAAC  1419


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 88/92 (95%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  694  CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGAAATGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAA  92
            ||| |||||||||||||||| |||| ||||||
Sbjct  754  AACCCTGAGAGGCACACTGCTACTGATGTTAA  785


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  1154  CTCGCTAACGTCAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  1213

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||||||||| |||| ||| |||||||||
Sbjct  1214  AACACTGAGAGGCACACTGCTACTGATGTGAATCAGAAC  1252


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  694  CTCGCTAACGTCAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  754  AACACTGAGAGGCACACTGCTACTGATGTGAATCAGAAC  792


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  694  CTCGCTAACGTCAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  754  AACACTGAGAGGCACACTGCTACTGATGTGAATCAGAAC  792


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  694  CTCGCTAACGTCAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  753

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  754  AACACTGAGAGGCACACTGCTACTGATGTGAATCAGAAC  792


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  706  CTCGCTAACGTCAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAACTAGTGAG  765

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  766  AACACTGAGAGGCACACTGCTACTGATGTGAATCAGAAC  804


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             |||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||
Sbjct  1306  CTCGCCAACGTTAAAACCAGGATGTTTGGCTTGGATGGAAACGTGGCAACAACTAGTGAG  1365

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||||||||| |||| ||| |||||||||
Sbjct  1366  AACACTGAGAGGCACACTGCAACTGATGTGAATCAGAAC  1404


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             |||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||
Sbjct  1045  CTCGCCAACGTTAATACCAGGATGTTTGGCTTGGATGGAAACGTGGCAACAACTAGTGAG  1104

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||||||||| |||| ||| |||||||||
Sbjct  1105  AACACTGAGAGGCACACTGCAACTGATGTGAATCAGAAC  1143


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct  739  CTCGCAAACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCAACAACTAGTGAG  798

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||||||||| |||| ||| |||||||||
Sbjct  799  AACACTGAGAGGCACACTGCAACTGATGTGAATCAGAAC  837


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             |||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||
Sbjct  1045  CTCGCCAACGTTAATACCAGGATGTTTGGCTTGGATGGAAACGTGGCAACAACTAGTGAG  1104

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||||||||| |||| ||| |||||||||
Sbjct  1105  AACACTGAGAGGCACACTGCAACTGATGTGAATCAGAAC  1143


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct  934   CTCGCCAACGTAAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAATTAGTGAG  993

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||| |||||  ||| ||| |||||||||
Sbjct  994   AACACTGAGAGGCATACTGCTGCTGATGTGAATCAGAAC  1032


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 86/93 (92%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  7    AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  66
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  775  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  834

Query  67   GAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||| |||| ||| |||||||||
Sbjct  835  GAGAGGCACACTGCAACTGATGTGAATCAGAAC  867


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 86/93 (92%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  7    AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  66
            ||||||||||| |||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  892  AACGTTAACACTAGGATGTTTGGCCTGGATGGAAACGTCGCGACAACTAGTGAGAACACT  951

Query  67   GAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            ||||||||||||||||||| ||| |||||||||
Sbjct  952  GAGAGGCACACTGCCACTGATGTGAATCAGAAC  984


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 86/93 (92%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  7    AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  66
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  799  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  858

Query  67   GAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||| |||| ||| |||||||||
Sbjct  859  GAGAGGCACACTGCAACTGATGTGAATCAGAAC  891


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 86/93 (92%), Gaps = 0/93 (0%)
 Strand=Plus/Plus

Query  7    AACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACT  66
            |||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct  763  AACGTTAACACCAGGATGTTTGGCCTGGATGGAAACGTTGCCACAACTAGTGAGAACACT  822

Query  67   GAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||| |||| ||| |||||||||
Sbjct  823  GAGAGGCACACTGCAACTGATGTGAATCAGAAC  855


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||
Sbjct  9103  CTCGCCAACGTAAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAGTTAGTGAG  9162

Query  61    AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
             |||||||||||||| |||||  ||| ||| |||||||||
Sbjct  9163  AACACTGAGAGGCATACTGCTGCTGATGTGAATCAGAAC  9201


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||
Sbjct  859  CTCGCCAACGTAAACACCAGGATGTTTGGCCTGGATGGGAACGTGGCAACAGTTAGTGAG  918

Query  61   AACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAAC  99
            |||||||||||||| |||||  ||| ||| |||||||||
Sbjct  919  AACACTGAGAGGCATACTGCTGCTGATGTGAATCAGAAC  957


>gb|EU334547.1| Bituminaria bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 71/80 (88%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||||||||||||| ||||||| || ||||| ||||||||||| || || |||
Sbjct  1279  CTCGCCAACGTTAACACCAGGTTGTTTGGACTTGATGGAAATGTGGCAACCACCAGCGAG  1338

Query  61    AACACTGAGAGGCACACTGC  80
             || ||||| |||||||||||
Sbjct  1339  AATACTGAAAGGCACACTGC  1358


>gb|EU334546.1| Psoralea bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 71/80 (88%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||||||||||||| ||||||| || ||||| || |||||||| ||||| |||
Sbjct  1279  CTCGCCAACGTTAACACCAGGTTGTTTGGACTTGATGGAAACGTGGCAACCACTAGCGAG  1338

Query  61    AACACTGAGAGGCACACTGC  80
             || ||||| |||||||||||
Sbjct  1339  AATACTGAAAGGCACACTGC  1358


>gb|DQ860147.1| Florida passionflower potyvirus LAJ-2006 coat protein gene, partial 
cds
Length=1439

 Score = 87.7 bits (44),  Expect = 7e-15
 Identities = 71/80 (88%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1     CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
             ||||||||||||||||||||| ||||||| || ||||| ||||||||||| || || |||
Sbjct  1287  CTCGCCAACGTTAACACCAGGTTGTTTGGACTTGATGGAAATGTGGCAACCACCAGCGAG  1346

Query  61    AACACTGAGAGGCACACTGC  80
             || ||||| |||||||||||
Sbjct  1347  AATACTGAAAGGCACACTGC  1366


>gb|DQ898199.1| Hardenbergia mosaic virus isolate MR-21 polyprotein gene, partial 
cds
Length=834

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 64/71 (90%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||||| |||||||||| ||||||| ||||| ||||||| ||| ||||||||||| 
Sbjct  709  GTTAACACCAAGATGTTTGGCTTGGATGGAAATGTTGCAACAATTAGCGAGAACACTGAA  768

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  769  AGGCACACTGC  779


>gb|DQ898198.1| Hardenbergia mosaic virus isolate MR-13 polyprotein gene, partial 
cds
Length=834

 Score = 85.7 bits (43),  Expect = 3e-14
 Identities = 64/71 (90%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||||| |||||||||| ||||||| ||||| ||||||| ||| ||||||||||| 
Sbjct  709  GTTAACACCAAGATGTTTGGCTTGGATGGAAATGTTGCAACAATTAGCGAGAACACTGAA  768

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  769  AGGCACACTGC  779


>gb|EF375607.1| Hardenbergia mosaic virus isolate Can1-1 coat protein gene, partial 
cds
Length=822

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 66/75 (88%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  6    CAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACAC  65
            |||||||||||| | | |||||||| |||||||||| || |||||||| || ||||||||
Sbjct  699  CAACGTTAACACTAAGTTGTTTGGCTTGGATGGGAACGTTGCAACAACCAGCGAGAACAC  758

Query  66   TGAGAGGCACACTGC  80
            ||| |||||||||||
Sbjct  759  TGAAAGGCACACTGC  773


>gb|DQ898211.1| Hardenbergia mosaic virus isolate MR-3 polyprotein gene, partial 
cds
Length=834

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 63/71 (88%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||||| |||||||||| ||||||| ||||| |||||||  || ||||||||||| 
Sbjct  709  GTTAACACCAAGATGTTTGGCTTGGATGGAAATGTTGCAACAATCAGCGAGAACACTGAA  768

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  769  AGGCACACTGC  779


>gb|DQ898206.1| Hardenbergia mosaic virus isolate WHP-1 polyprotein gene, partial 
cds
Length=828

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 66/75 (88%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  6    CAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACAC  65
            |||||||||||| | | |||||||| |||||||||| || |||||||| || ||||||||
Sbjct  699  CAACGTTAACACTAAGTTGTTTGGCTTGGATGGGAACGTTGCAACAACCAGCGAGAACAC  758

Query  66   TGAGAGGCACACTGC  80
            ||| |||||||||||
Sbjct  759  TGAAAGGCACACTGC  773


>gb|AF328760.1|AF328760 Bean common mosaic necrosis virus isolate Chiapas polyprotein 
mRNA, partial cds
Length=720

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 69/80 (86%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||||||||| ||  ||||||| |||||||| || ||||||||||| || |||
Sbjct  634  CTCGCTAACGTTAACACTAGATTGTTTGGTCTGGATGGTAACGTGGCAACAACCAGCGAG  693

Query  61   AACACTGAGAGGCACACTGC  80
            || ||||| |||||||||||
Sbjct  694  AATACTGAAAGGCACACTGC  713


>gb|AF328758.1|AF328758 Bean common mosaic necrosis virus isolate Durango polyprotein 
mRNA, partial cds
Length=720

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 69/80 (86%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||||||||| ||  ||||||| |||||||| || ||||||||||| || |||
Sbjct  634  CTCGCTAACGTTAACACTAGATTGTTTGGTCTGGATGGTAACGTGGCAACAACCAGCGAG  693

Query  61   AACACTGAGAGGCACACTGC  80
            || ||||| |||||||||||
Sbjct  694  AATACTGAAAGGCACACTGC  713


>gb|AF328754.1|AF328754 Bean common mosaic necrosis virus isolate San Luis Potosi polyprotein 
mRNA, partial cds
Length=720

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 69/80 (86%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||||||||| ||  ||||||| |||||||| || ||||||||||| || |||
Sbjct  634  CTCGCTAACGTTAACACTAGATTGTTTGGTCTGGATGGTAACGTGGCAACAACCAGCGAG  693

Query  61   AACACTGAGAGGCACACTGC  80
            || ||||| |||||||||||
Sbjct  694  AATACTGAAAGGCACACTGC  713


>gb|AF328752.1|AF328752 Bean common mosaic necrosis virus isolate Zacatecas polyprotein 
mRNA, partial cds
Length=720

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 69/80 (86%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  1    CTCGCCAACGTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAG  60
            ||||| ||||||||||| ||  ||||||| |||||||| || ||||||||||| || |||
Sbjct  634  CTCGCTAACGTTAACACTAGATTGTTTGGTCTGGATGGTAACGTGGCAACAACCAGCGAG  693

Query  61   AACACTGAGAGGCACACTGC  80
            || ||||| |||||||||||
Sbjct  694  AATACTGAAAGGCACACTGC  713


>gb|DQ898212.1| Hardenbergia mosaic virus isolate MR-30 polyprotein gene, partial 
cds
Length=834

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||||| |||||||||| |||| || ||||| |||||||  || ||||||||||| 
Sbjct  709  GTTAACACCAAGATGTTTGGCTTGGACGGAAATGTTGCAACAATCAGCGAGAACACTGAA  768

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  769  AGGCACACTGC  779


>gb|DQ898210.1| Hardenbergia mosaic virus isolate KiP-1 polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||| | | |||||||| ||||||| ||||| |||||||| || ||||||||||| 
Sbjct  703  GTTAACACTAAGTTGTTTGGCTTGGATGGTAATGTTGCAACAACCAGCGAGAACACTGAA  762

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  763  AGGCACACTGC  773


>gb|DQ898209.1| Hardenbergia mosaic virus isolate He-1 polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||| | | |||||||| ||||||| ||||| |||||||| || ||||||||||| 
Sbjct  703  GTTAACACTAAGTTGTTTGGCTTGGATGGTAATGTTGCAACAACCAGCGAGAACACTGAA  762

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  763  AGGCACACTGC  773


>gb|DQ898208.1| Hardenbergia mosaic virus isolate Wel-1 polyprotein gene, partial 
cds
Length=822

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||||| | |||||||| ||||||| ||| | |||||||| || ||||||||||| 
Sbjct  697  GTTAACACCAAGTTGTTTGGCTTGGATGGTAATATTGCAACAACAAGCGAGAACACTGAA  756

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  757  AGGCACACTGC  767


>gb|DQ898207.1| Hardenbergia mosaic virus isolate WHP-2 polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  10   GTTAACACCAGGATGTTTGGCCTGGATGGGAATGTGGCAACAACTAGTGAGAACACTGAG  69
            |||||||| | | |||||||| ||||||| ||||| |||||||| || ||||||||||| 
Sbjct  703  GTTAACACTAAGTTGTTTGGCTTGGATGGTAATGTTGCAACAACCAGCGAGAACACTGAA  762

Query  70   AGGCACACTGC  80
            |||||||||||
Sbjct  763  AGGCACACTGC  773



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1912167
Number of extensions: 102337
Number of successful extensions: 32184
Number of sequences better than 10: 58
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 32179
Number of HSP's successfully gapped: 58
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY83XFMP016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|727-825
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   188    3e-45
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   180    6e-43
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   180    6e-43
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   172    2e-40
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   172    2e-40
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   172    2e-40
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   172    2e-40
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   165    4e-38
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   157    9e-36
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   157    9e-36
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   157    9e-36
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   157    9e-36
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   157    9e-36
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   157    9e-36
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   157    9e-36
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   157    9e-36
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...   157    9e-36
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...   157    9e-36
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   149    2e-33
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   149    2e-33
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   141    5e-31
gb|EF547367.1|  South African passiflora virus polyprotein gen...   133    1e-28
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   133    1e-28
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   127    8e-27
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   127    8e-27
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   117    8e-24
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   117    8e-24
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   111    5e-22
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   109    2e-21
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   103    1e-19
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  95.6    3e-17
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  95.6    3e-17
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  77.8    7e-12
gb|EU042755.1|  Anemone mosaic virus polyprotein gene, partial...  69.9    2e-09
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  69.9    2e-09
gb|DQ898202.1|  Hardenbergia mosaic virus isolate Sb-19-1 poly...  69.9    2e-09
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  69.9    2e-09
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  69.9    2e-09
emb|AJ889245.1|  Bean common mosaic virus partial gene for pol...  69.9    2e-09
gb|AY748919.1|  Bean common mosaic virus isolate BCMV-pnut pol...  69.9    2e-09
gb|AY748918.1|  Bean common mosaic virus isolate BCMV-pst poly...  69.9    2e-09
gb|DQ367846.1|  Peanut stripe virus coat protein gene, partial...  69.9    2e-09
emb|Y11775.1|PSVNIB399  Peanut stripe virus RNA for NIb protei...  69.9    2e-09
emb|AJ132145.1|PST132145  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|AJ132144.1|PST132144  Peanut stripe virus polyprotein gene...  69.9    2e-09
emb|X63559.1|PSTVCP  Peanut stripe virus gene for capsid protein   69.9    2e-09
gb|U34972.1|PSU34972  Peanut stripe virus mRNA polyprotein mRN...  69.9    2e-09
gb|U05771.1|PSU05771  Peanut stripe virus, complete genome         69.9    2e-09
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  65.9    3e-08
gb|DQ925418.1|  Bean common mosaic virus strain peanut stripe ...  63.9    1e-07
emb|AJ851894.1|  Peanut stripe virus partial CP gene for coat ...  63.9    1e-07
gb|AF200624.1|AF200624  Peanut stripe virus clone SN-Nib3 pol ...  63.9    1e-07
gb|AF200623.1|AF200623  Peanut stripe virus clone SN-Nib2 pol ...  63.9    1e-07
gb|AF191748.1|AF191748  Peanut stripe virus severe necrotic st...  63.9    1e-07
emb|Y11774.1|PSVNIBT7  Peanut stripe virus RNA for NIb protein...  63.9    1e-07
emb|Y11773.1|PSVNIBT6  Peanut stripe virus RNA for NIb protein...  63.9    1e-07
emb|Y11771.1|PSVNIBT3  Peanut stripe virus RNA for NIb protein...  63.9    1e-07
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  61.9    4e-07
gb|DQ898203.1|  Hardenbergia mosaic virus isolate Sb-19-4 poly...  61.9    4e-07
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  61.9    4e-07
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  61.9    4e-07
gb|DQ898195.1|  Hardenbergia mosaic virus isolate MU-1C polypr...  61.9    4e-07
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  61.9    4e-07
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  61.9    4e-07
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  61.9    4e-07
gb|DQ098901.1|  Siratro 2 virus Y polyprotein gene, partial cds    61.9    4e-07
emb|Z21700.1|PSV3TERM  Peanut stripe virus 370 capsid protein      61.9    4e-07
emb|AJ132158.1|PST132158  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132156.1|PST132156  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132155.1|PST132155  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132154.1|PST132154  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132153.1|PST132153  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132152.1|PST132152  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132151.1|PST132151  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132150.1|PST132150  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132149.1|PST132149  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132148.1|PST132148  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132147.1|PST132147  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132146.1|PST132146  Peanut stripe virus polyprotein gene...  61.9    4e-07
emb|AJ132143.1|PST132143  Peanut stripe virus polyprotein gene...  61.9    4e-07
gb|AF079116.1|AF079116  Peanut stripe virus coat protein gene,...  61.9    4e-07
gb|L19472.1|BCMCOATA  Bean common mosaic virus coat protein (s...  61.9    4e-07
gb|EU334547.1|  Bituminaria bituminosa mosaic virus isolate Co...  58.0    6e-06
emb|Y11776.1|PSVNIBT1  Peanut stripe virus RNA for NIb protein...  58.0    6e-06
gb|DQ925419.1|  Bean common mosaic virus strain peanut stripe ...  56.0    3e-05
gb|AF073380.1|AF073380  Peanut stripe virus polyprotein gene, ...  56.0    3e-05
gb|U37074.1|BCU37074  Bean common mosaic virus strain US4 coat...  56.0    3e-05
gb|DQ898215.1|  Passion fruit woodiness virus isolate Gld-1 po...  54.0    1e-04
gb|DQ898214.1|  Hardenbergia mosaic virus isolate Sb-6 polypro...  54.0    1e-04
gb|DQ898210.1|  Hardenbergia mosaic virus isolate KiP-1 polypr...  54.0    1e-04
gb|DQ898209.1|  Hardenbergia mosaic virus isolate He-1 polypro...  54.0    1e-04
gb|DQ898208.1|  Hardenbergia mosaic virus isolate Wel-1 polypr...  54.0    1e-04
gb|DQ898207.1|  Hardenbergia mosaic virus isolate WHP-2 polypr...  54.0    1e-04
gb|DQ898205.1|  Hardenbergia mosaic virus isolate Sb-5 polypro...  54.0    1e-04
gb|DQ898201.1|  Hardenbergia mosaic virus isolate Med-7 polypr...  54.0    1e-04
gb|DQ898199.1|  Hardenbergia mosaic virus isolate MR-21 polypr...  54.0    1e-04
gb|DQ898198.1|  Hardenbergia mosaic virus isolate MR-13 polypr...  54.0    1e-04
gb|DQ898194.1|  Hardenbergia mosaic virus isolate MU-1A polypr...  54.0    1e-04
gb|DQ898193.1|  Hardenbergia mosaic virus isolate He-2 polypro...  54.0    1e-04

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  188 bits (95),  Expect = 3e-45
 Identities = 98/99 (98%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  755  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAAT  814

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  853


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||| |||||||||||||||||||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||| |||||||||||||||||||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAGT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||| |||||||||||||||||||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAGT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||| |||||||||||||||||||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct  755  GATGGGAATGTGGCAACAACTAGTGAGAACAATGAGAGGCACACTGCCACTGATGTTAAT  814

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||| |||||||||||||||||||||||||||
Sbjct  815  CAGAACATGCACTCCCTCTTGGGGATGACGCATGGGCAG  853


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct  730  GATGGGAATGTGGCAACAACTAGTGAGAACAATGAGAGGCACACTGCCACTGATGTTAAT  789

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||| |||||||||||||||||||||||||||
Sbjct  790  CAGAACATGCACTCCCTCTTGGGGATGACGCATGGGCAG  828


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTTAGC  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||| |||||||||||||||||||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  1187  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTGAAT  1246

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             |||||||||||||||||||| ||||||||||||||||||
Sbjct  1247  CAGAACATGCATTCCCTCTTAGGGATGACGCATGGGCAG  1285


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  727  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTGAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTCTTAGGGATGACGCATGGGCAG  825


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  727  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTGAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTCTTAGGGATGACGCATGGGCAG  825


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  727  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTGAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTCTTAGGGATGACGCATGGGCAG  825


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTCAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||||||||| ||||| |||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTTTTGGGAATGACGCATGGGCAG  825


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTCAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||||||||| ||||| |||||||||||||||
Sbjct  787  CAGAACATGCATTCCCTTTTGGGAATGACGCATGGGCAG  825


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct  1354  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTGAAT  1413

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             ||||||||||| ||||||||||| |||||||||||||||
Sbjct  1414  CAGAACATGCACTCCCTCTTGGGAATGACGCATGGGCAG  1452


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  739  GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTGAAT  798

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct  799  CAGAACATGCATTCCCTCTTAGGGATGACGCATGGGCAG  837


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  730  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTCAAT  789

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||||||||| ||||| |||||||||||||||
Sbjct  790  CAGAACATGCATTCCCTTTTGGGAATGACGCATGGGCAG  828


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  730  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCTACTGATGTCAAT  789

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||||||||| ||||| |||||||||||||||
Sbjct  790  CAGAACATGCATTCCCTTTTGGGAATGACGCATGGGCAG  828


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||| 
Sbjct  727  GATGGAAATGTGGCAACAACTAGTGAGAACCCTGAGAGGCACACTGCTACTGATGTTAAC  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            || ||||||||||||||||||||||||||||||||||||
Sbjct  787  CAAAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  825


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct  970   GATGGGAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCGCTGATGTGAAT  1029

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             ||||||||||| ||||||||||| |||||||||||||||
Sbjct  1030  CAGAACATGCACTCCCTCTTGGGAATGACGCATGGGCAG  1068


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 96/102 (94%), Gaps = 3/102 (2%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct  727  GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGCGGCACACTGCCACTGATGTTAAT  786

Query  61   CAGAACATGCATT-CCCTCTTGG--GGATGACGCATGGGCAG  99
            ||||| ||||||| |||||||||  |||||||||||||||||
Sbjct  787  CAGAATATGCATTCCCCTCTTGGATGGATGACGCATGGGCAG  828


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             ||||| || |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  1339  GATGGAAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAAT  1398

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             |||||||||||||||||  | ||||||||||||||||||
Sbjct  1399  CAGAACATGCATTCCCTTCTCGGGATGACGCATGGGCAG  1437


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||| |||||||||| ||||||||||||||||||||| |||||  ||| ||| |||
Sbjct  967   GATGGGAACGTGGCAACAATTAGTGAGAACACTGAGAGGCATACTGCTGCTGATGTGAAT  1026

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             ||||||||||| |||||||||||||||||||||||||||
Sbjct  1027  CAGAACATGCACTCCCTCTTGGGGATGACGCATGGGCAG  1065


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             ||||| || |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  1078  GATGGAAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAAT  1137

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGG  96
             |||||||||||||||||  | |||||||||||||||
Sbjct  1138  CAGAACATGCATTCCCTTCTCGGGATGACGCATGGG  1173


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             ||||| || |||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct  1078  GATGGAAACGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAAT  1137

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGG  96
             |||||||||||||||||  | |||||||||||||||
Sbjct  1138  CAGAACATGCATTCCCTTCTCGGGATGACGCATGGG  1173


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||| |||||||||  ||||||||||||||||||||| |||||  ||| ||| |||
Sbjct  9136  GATGGGAACGTGGCAACAGTTAGTGAGAACACTGAGAGGCATACTGCTGCTGATGTGAAT  9195

Query  61    CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
             ||||||||||| |||||||| ||||||||||||||||||
Sbjct  9196  CAGAACATGCACTCCCTCTTAGGGATGACGCATGGGCAG  9234


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| |||||||||  ||||||||||||||||||||| |||||  ||| ||| |||
Sbjct  892  GATGGGAACGTGGCAACAGTTAGTGAGAACACTGAGAGGCATACTGCTGCTGATGTGAAT  951

Query  61   CAGAACATGCATTCCCTCTTGGGGATGACGCATGGGCAG  99
            ||||||||||| |||||||| ||||||||||||||||||
Sbjct  952  CAGAACATGCACTCCCTCTTAGGGATGACGCATGGGCAG  990


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 77/84 (91%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16    ACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCC  75
             ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||
Sbjct  934   ACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGATGTGAATCAGAACATGCACTCC  993

Query  76    CTCTTGGGGATGACGCATGGGCAG  99
             ||  | ||||||| ||||||||||
Sbjct  994   CTTCTTGGGATGAGGCATGGGCAG  1017


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 79/87 (90%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  13   GCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCAT  72
            ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| 
Sbjct  784  GCAACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAATCAGAACATGCAC  843

Query  73   TCCCTCTTGGGGATGACGCATGGGCAG  99
            |||||  | ||||||| ||||||||||
Sbjct  844  TCCCTTCTTGGGATGAGGCATGGGCAG  870


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 76/84 (90%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   ACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCC  75
            |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||
Sbjct  841  ACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCC  900

Query  76   CTCTTGGGGATGACGCATGGGCAG  99
            ||  | ||||||| ||||||||||
Sbjct  901  CTTCTTGGGATGAGGCATGGGCAG  924


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 75/84 (89%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   ACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCC  75
            |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| || 
Sbjct  817  ACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCA  876

Query  76   CTCTTGGGGATGACGCATGGGCAG  99
            ||| | || |||| ||||||||||
Sbjct  877  CTCCTCGGAATGAGGCATGGGCAG  900


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 75/84 (89%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   ACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCC  75
            |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| || 
Sbjct  805  ACAACTAGTGAGAACACTGAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCA  864

Query  76   CTCTTGGGGATGACGCATGGGCAG  99
            ||| | || |||| ||||||||||
Sbjct  865  CTCCTCGGAATGAGGCATGGGCAG  888


>gb|DQ898206.1| Hardenbergia mosaic virus isolate WHP-1 polyprotein gene, partial 
cds
Length=828

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 75/87 (86%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| || |||||||| || ||||||||||| ||||||||||| |  | ||| |||
Sbjct  727  GATGGGAACGTTGCAACAACCAGCGAGAACACTGAAAGGCACACTGCAAAGGATGTGAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATG  87
             |||||||||||||||| |||||||||
Sbjct  787  GAGAACATGCATTCCCTTTTGGGGATG  813


>gb|EU042755.1| Anemone mosaic virus polyprotein gene, partial cds
Length=1380

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             ||||||||||| |||||||| ||||| || || |||||||||||||| || | ||||| |
Sbjct  961   GATGGGAATGTTGCAACAACAAGTGAAAATACGGAGAGGCACACTGCAACAGATGTTAGT  1020

Query  61    CAGAACATGCA  71
             |||||||||||
Sbjct  1021  CAGAACATGCA  1031


>gb|EF375607.1| Hardenbergia mosaic virus isolate Can1-1 coat protein gene, partial 
cds
Length=822

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 74/87 (85%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||| || |||||||| || ||||||||||| ||||||||||| |  | ||| |||
Sbjct  727  GATGGGAACGTTGCAACAACCAGCGAGAACACTGAAAGGCACACTGCAAAGGATGTGAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATG  87
             |||||| ||||||||| |||||||||
Sbjct  787  GAGAACACGCATTCCCTTTTGGGGATG  813


>gb|DQ898202.1| Hardenbergia mosaic virus isolate Sb-19-1 polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 74/87 (85%), Gaps = 0/87 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            ||||| ||||| |||||||  || ||||||||||| ||||||||||| |  | ||| |||
Sbjct  727  GATGGTAATGTAGCAACAATGAGCGAGAACACTGAAAGGCACACTGCAAAGGATGTCAAT  786

Query  61   CAGAACATGCATTCCCTCTTGGGGATG  87
            || |||||||||||||| |||||||||
Sbjct  787  CAAAACATGCATTCCCTGTTGGGGATG  813


>gb|DQ898197.1| Hardenbergia mosaic virus isolate MU-3A polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 65/75 (86%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  13   GCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCAT  72
            |||||||| || ||||||||||| ||||||||||| |  | ||| ||| |||||||||||
Sbjct  739  GCAACAACCAGCGAGAACACTGAAAGGCACACTGCAAAGGATGTGAATGAGAACATGCAT  798

Query  73   TCCCTCTTGGGGATG  87
            ||||| |||||||||
Sbjct  799  TCCCTTTTGGGGATG  813


>gb|DQ898188.1| Hardenbergia mosaic virus isolate BB-6 polyprotein gene, partial 
cds
Length=828

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 65/75 (86%), Gaps = 0/75 (0%)
 Strand=Plus/Plus

Query  13   GCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCAT  72
            |||||||| || ||||||||||| ||||||||||| |  | ||| ||| |||||||||||
Sbjct  739  GCAACAACCAGCGAGAACACTGAAAGGCACACTGCAAAGGATGTGAATGAGAACATGCAT  798

Query  73   TCCCTCTTGGGGATG  87
            ||||| |||||||||
Sbjct  799  TCCCTTTTGGGGATG  813


>emb|AJ889245.1| Bean common mosaic virus partial gene for polyprotein, genomic 
RNA, strain Peanut stripe virus
Length=1749

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  1396  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  1455

Query  61    CAGAACATGCA  71
             |||||||||||
Sbjct  1456  CAGAACATGCA  1466


>gb|AY748919.1| Bean common mosaic virus isolate BCMV-pnut polyprotein mRNA, 
partial cds
Length=709

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  355  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  414

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  415  CAGAACATGCA  425


>gb|AY748918.1| Bean common mosaic virus isolate BCMV-pst polyprotein mRNA, partial 
cds
Length=709

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  355  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  414

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  415  CAGAACATGCA  425


>gb|DQ367846.1| Peanut stripe virus coat protein gene, partial cds
Length=864

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  763  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  822

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  823  CAGAACATGCA  833


>emb|Y11775.1|PSVNIB399 Peanut stripe virus RNA for NIb protein and coat protein, isolate 
95/399
Length=1194

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  892  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  951

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  952  CAGAACATGCA  962


>emb|AJ132145.1|PST132145 Peanut stripe virus polyprotein gene 3' terminus, isolate China 
W2
Length=1194

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  892  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  951

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  952  CAGAACATGCA  962


>emb|AJ132144.1|PST132144 Peanut stripe virus polyprotein gene 3' terminus, isolate China 
W
Length=1194

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1    GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
            |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  892  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  951

Query  61   CAGAACATGCA  71
            |||||||||||
Sbjct  952  CAGAACATGCA  962


>emb|X63559.1|PSTVCP Peanut stripe virus gene for capsid protein
Length=1367

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  1012  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  1071

Query  61    CAGAACATGCA  71
             |||||||||||
Sbjct  1072  CAGAACATGCA  1082


>gb|U34972.1|PSU34972 Peanut stripe virus mRNA polyprotein mRNA, complete cds
Length=10086

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  9701  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  9760

Query  61    CAGAACATGCA  71
             |||||||||||
Sbjct  9761  CAGAACATGCA  9771


>gb|U05771.1|PSU05771 Peanut stripe virus, complete genome
Length=10056

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 62/71 (87%), Gaps = 0/71 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             |||||||||||||||||||| || ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  9701  GATGGGAATGTGGCAACAACCAGCGAGAATACTGAAAGGCACACTGCAAGGGACGTTAAT  9760

Query  61    CAGAACATGCA  71
             |||||||||||
Sbjct  9761  CAGAACATGCA  9771


>gb|EU334546.1| Psoralea bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 66/77 (85%), Gaps = 0/77 (0%)
 Strand=Plus/Plus

Query  1     GATGGGAATGTGGCAACAACTAGTGAGAACACTGAGAGGCACACTGCCACTGGTGTTAAT  60
             ||||| || |||||||| ||||| ||||| ||||| ||||||||||| |  |  ||||||
Sbjct  1312  GATGGAAACGTGGCAACCACTAGCGAGAATACTGAAAGGCACACTGCGAGGGACGTTAAT  1371

Query  61    CAGAACATGCATTCCCT  77
             |||||||||||||||||
Sbjct  1372  CAGAACATGCATTCCCT  1388



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 2083445
Number of extensions: 123986
Number of successful extensions: 34292
Number of sequences better than 10: 22
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 34289
Number of HSP's successfully gapped: 22
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY85NADP011


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|760-858
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   172    2e-40
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   172    2e-40
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   165    4e-38
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   165    4e-38
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   157    9e-36
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   157    9e-36
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   157    9e-36
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   157    9e-36
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   157    9e-36
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   157    9e-36
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   149    2e-33
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   133    1e-28
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   133    1e-28
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...   129    2e-27
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   127    8e-27
gb|EF547367.1|  South African passiflora virus polyprotein gen...   125    3e-26
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   125    3e-26
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   125    3e-26
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   125    3e-26
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   125    3e-26
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...   121    5e-25
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...   121    5e-25
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   117    8e-24
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   117    8e-24
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   109    2e-21
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   109    2e-21
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...   107    8e-21
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   101    5e-19
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...  99.6    2e-18
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...  97.6    7e-18
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  77.8    7e-12
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  77.8    7e-12
gb|EU334546.1|  Psoralea bituminosa mosaic virus isolate Coara...  46.1    0.024
gb|DQ898206.1|  Hardenbergia mosaic virus isolate WHP-1 polypr...  46.1    0.024
gb|DQ898202.1|  Hardenbergia mosaic virus isolate Sb-19-1 poly...  46.1    0.024
gb|DQ898197.1|  Hardenbergia mosaic virus isolate MU-3A polypr...  46.1    0.024
gb|DQ898188.1|  Hardenbergia mosaic virus isolate BB-6 polypro...  46.1    0.024
gb|EU042755.1|  Anemone mosaic virus polyprotein gene, partial...  44.1    0.095
gb|DQ898203.1|  Hardenbergia mosaic virus isolate Sb-19-4 poly...  44.1    0.095
gb|AY864850.1|  Tricyrtis potyvirus polyprotein gene, partial cds  42.1    0.38 
gb|DQ851493.1|  Telosma mosaic virus isolate Hanoi, complete g...  40.1    1.5  
emb|AM039800.1|  Fritillary virus Y complete virion genome, is...  40.1    1.5  
gb|EU334547.1|  Bituminaria bituminosa mosaic virus isolate Co...  38.2    5.9  
gb|EU035271.1|  Malaysian Passiflora virus polyprotein mRNA, p...  38.2    5.9  
gb|EF375608.1|  Hardenbergia mosaic virus isolate Can1-2 coat ...  38.2    5.9  
gb|EF375607.1|  Hardenbergia mosaic virus isolate Can1-1 coat ...  38.2    5.9  
gb|DQ898200.1|  Hardenbergia mosaic virus isolate Med-1 polypr...  38.2    5.9  
gb|DQ898196.1|  Hardenbergia mosaic virus isolate MU-2A polypr...  38.2    5.9  
gb|DQ898195.1|  Hardenbergia mosaic virus isolate MU-1C polypr...  38.2    5.9  
gb|DQ898194.1|  Hardenbergia mosaic virus isolate MU-1A polypr...  38.2    5.9  
gb|DQ898192.1|  Hardenbergia mosaic virus isolate Co-1 polypro...  38.2    5.9  
gb|DQ898191.1|  Hardenbergia mosaic virus isolate Bun-9 polypr...  38.2    5.9  
gb|DQ898190.1|  Hardenbergia mosaic virus isolate BB-2 polypro...  38.2    5.9  
gb|DQ898189.1|  Hardenbergia mosaic virus isolate BB-1 polypro...  38.2    5.9  
gb|AE013599.4|  Drosophila melanogaster chromosome 2R, complet...  38.2    5.9  
gb|AC142111.3|  Mus musculus BAC clone RP24-63G9 from chromoso...  38.2    5.9  
gb|AC127318.4|  Mus musculus BAC clone RP23-228J12 from chromo...  38.2    5.9  
emb|AL109838.11|  Human DNA sequence from clone RP4-796I8 on c...  38.2    5.9  
emb|AJ278854.1|LMV78854  Lettuce mosaic virus (Isolate AF199) ...  38.2    5.9  
gb|AC116616.5|  Homo sapiens BAC clone RP11-51M24 from 4, comp...  38.2    5.9  
gb|AC007593.5|AC007593  Drosophila melanogaster, chromosome 2R...  38.2    5.9  
emb|Z78232.1|LMVZ78232  Lettuce mosaic virus (isolate Audran) ...  38.2    5.9  
emb|Z78231.1|LMVZ78231  Lettuce mosaic virus (isolate 13) 3' e...  38.2    5.9  
emb|Z78228.1|LMVZ78228  Lettuce mosaic virus (isolate Gr5) NIb...  38.2    5.9  
emb|AJ488153.1|LMO488153  Lettuce mosaic virus partial gene fo...  38.2    5.9  
emb|Z78229.1|LMVZ78229  Lettuce mosaic virus (isolate Gr4) par...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  858


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGATGTTAATCAGAATATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGATGTTAATCAGAATATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGATGTTAGTCAGAATATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGATGTTAGTCAGAATATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct  1220  GAGAGGCACACTGCTACTGATGTGAATCAGAACATGCATTCCCTCTTAGGGATGACGCAT  1279

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||||||||||||||||| |||||||||||||||||
Sbjct  1280  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  1318


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCCACTGATGTTAGCCAGAATATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTGAATCAGAACATGCATTCCCTCTTAGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTGAATCAGAACATGCATTCCCTCTTAGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  858


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             ||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||
Sbjct  1387  GAGAGGCACACTGCCACTGATGTGAATCAGAACATGCACTCCCTCTTGGGAATGACGCAT  1446

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||||||||||||||||| |||||||||||||||||
Sbjct  1447  GGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  1485


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             ||||||||||||||| ||| ||| |||||||||||||| ||||||||||| |||||||||
Sbjct  1003  GAGAGGCACACTGCCGCTGATGTGAATCAGAACATGCACTCCCTCTTGGGAATGACGCAT  1062

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             |||||||||||||||||||||||||||||||||||||||
Sbjct  1063  GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  1101


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTGAATCAGAACATGCATTCCCTCTTAGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||  |||||||||||||||||
Sbjct  820  GGGCAGTAAAGGCTTGGGTTTCGCCCTCGCCACAGTTAT  858


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||| |||||  ||| ||| |||||||||||||| |||||||||||||||||||||
Sbjct  1000  GAGAGGCATACTGCTGCTGATGTGAATCAGAACATGCACTCCCTCTTGGGGATGACGCAT  1059

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||| ||||||||||||| |||||||||||||||||
Sbjct  1060  GGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  1098


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             ||||||||||||||||||| ||| |||||||||||||| |||||  | ||||||| ||||
Sbjct  952   GAGAGGCACACTGCCACTGATGTGAATCAGAACATGCACTCCCTTCTTGGGATGAGGCAT  1011

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||||||||||||||||| |||||||||||||||||
Sbjct  1012  GGGCAGTAAAGGCTTGGGTTCAGCCCTCGCCACAGTTAT  1050


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 68/69 (98%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  788  GAGAGGCACACTGCCACTGATGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  847

Query  61   GGGCAGTAA  69
            |||||||||
Sbjct  848  GGGCAGTAA  856


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 92/100 (92%), Gaps = 1/100 (1%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTCAATCAGAACATGCATTCCCTTTTGGGAATGACGCAT  819

Query  61   GGGCAGTAAAGGC-TTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||| |||||||| ||||||||| |||||||
Sbjct  820  GGGCAGTAAAGGCTTTGGGTTCCGCCCTCGCCCCAGTTAT  859


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||||||||| |||| ||| ||||||||||||||||||||  | ||||||||||||
Sbjct  1372  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCATTCCCTTCTCGGGATGACGCAT  1431

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             |||||||||||| |||||||| |||||| ||||||||||
Sbjct  1432  GGGCAGTAAAGGTTTGGGTTCCGCCCTCACCACAGTTAT  1470


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 91/99 (91%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTTAACCAAAACATGCATTCCCTCTTGGGGATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||| |||| || || ||||||||||||||
Sbjct  820  GGGCAGTAAAGGCCTGGGGTC-GCTCTCGCCACAGTTAT  857


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 91/98 (92%), Gaps = 3/98 (3%)
 Strand=Plus/Plus

Query  5    GGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCC-TCTTGG--GGATGACGCATG  61
            ||||||||||||||| |||||||||||| |||||||||| ||||||  ||||||||||||
Sbjct  764  GGCACACTGCCACTGATGTTAATCAGAATATGCATTCCCCTCTTGGATGGATGACGCATG  823

Query  62   GGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            |||||||||||||| ||||| |||||||||||||||||
Sbjct  824  GGCAGTAAAGGCTTTGGTTCCGCCCTCGCCACAGTTAT  861


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||| |||||  ||| ||| |||||||||||||| |||||||| ||||||||||||
Sbjct  9169  GAGAGGCATACTGCTGCTGATGTGAATCAGAACATGCACTCCCTCTTAGGGATGACGCAT  9228

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||| ||||||||||||| |||||||||||||||||
Sbjct  9229  GGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  9267


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||| |||||  ||| ||| |||||||||||||| |||||||| ||||||||||||
Sbjct  925   GAGAGGCATACTGCTGCTGATGTGAATCAGAACATGCACTCCCTCTTAGGGATGACGCAT  984

Query  61    GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             ||||||| ||||||||||||| |||||||||||||||||
Sbjct  985   GGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCACAGTTAT  1023


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 67/69 (97%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct  788  GAGAGGCACACTGCCACTGATGTTAATCAGAACATGCACTCCCTCTTGGGGATGACGCAT  847

Query  61   GGGCAGTAA  69
            |||||||||
Sbjct  848  GGGCAGTAA  856


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score =  121 bits (61),  Expect = 5e-25
 Identities = 67/69 (97%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct  763  GAGAGGCACACTGCCACTGATGTTAATCAGAACATGCACTCCCTCTTGGGGATGACGCAT  822

Query  61   GGGCAGTAA  69
            |||||||||
Sbjct  823  GGGCAGTAA  831


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||||
Sbjct  760  GAGAGGCACACTGCTACTGATGTCAATCAGAACATGCATTCCCTTTTGGGAATGACGCAT  819

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||| |||| || |||| ||||||||||||
Sbjct  820  GGGCAGTAAAGGCCTGGG-TCCGCCCCCGCCACAGTTAT  857


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 89/99 (89%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||| |||||  | ||||||| ||||
Sbjct  859  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCCCTTCTTGGGATGAGGCAT  918

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| ||||||| |||||||||
Sbjct  919  GGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTAT  957


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 88/99 (88%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||| || ||| | || |||| ||||
Sbjct  835  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCACTCCTCGGAATGAGGCAT  894

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| ||||||| |||||||||
Sbjct  895  GGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTAT  933


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 88/99 (88%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||| || ||| | || |||| ||||
Sbjct  823  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCACTCCTCGGAATGAGGCAT  882

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            ||||||||||||||||||||| ||||||| |||||||||
Sbjct  883  GGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTAT  921


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score =  107 bits (54),  Expect = 8e-21
 Identities = 66/70 (94%), Gaps = 0/70 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct  772  GAGAGGCACACTGCTACTGATGTGAATCAGAACATGCATTCCCTCTTAGGGATGACGCAT  831

Query  61   GGGCAGTAAA  70
            ||||||||||
Sbjct  832  GGGCAGTAAA  841


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 87/99 (87%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||| |||||  | ||||||| ||||
Sbjct  805  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCACTCCCTTCTTGGGATGAGGCAT  864

Query  61   GGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
            |||||||||||| |||||| | |||||| ||||||||||
Sbjct  865  GGGCAGTAAAGGTTTGGGTCCAGCCCTCACCACAGTTAT  903


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score = 99.6 bits (50),  Expect = 2e-18
 Identities = 65/70 (92%), Gaps = 0/70 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||||
Sbjct  763  GAGAGGCACACTGCTACTGATGTCAATCAGAACATGCATTCCCTTTTGGGAATGACGCAT  822

Query  61   GGGCAGTAAA  70
            ||||||||||
Sbjct  823  GGGCAGTAAA  832


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score = 97.6 bits (49),  Expect = 7e-18
 Identities = 64/69 (92%), Gaps = 0/69 (0%)
 Strand=Plus/Plus

Query  1    GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
            |||||||||||||| |||| ||| |||||||||||||||||||| ||||| |||||||||
Sbjct  763  GAGAGGCACACTGCTACTGATGTCAATCAGAACATGCATTCCCTTTTGGGAATGACGCAT  822

Query  61   GGGCAGTAA  69
            |||||||||
Sbjct  823  GGGCAGTAA  831


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 57/63 (90%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||||||||| |||| ||| ||||||||||||||||||||  | ||||||||||||
Sbjct  1111  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCATTCCCTTCTCGGGATGACGCAT  1170

Query  61    GGG  63
             |||
Sbjct  1171  GGG  1173


 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 48/51 (94%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  49    GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             |||||||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct  1171  GGGATGACGCATGGGCAGTAAAGGTTTGGGTTCCGCCCTCACCACAGTTAT  1221


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 57/63 (90%), Gaps = 0/63 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATGACGCAT  60
             |||||||||||||| |||| ||| ||||||||||||||||||||  | ||||||||||||
Sbjct  1111  GAGAGGCACACTGCAACTGATGTGAATCAGAACATGCATTCCCTTCTCGGGATGACGCAT  1170

Query  61    GGG  63
             |||
Sbjct  1171  GGG  1173


 Score = 77.8 bits (39),  Expect = 7e-12
 Identities = 48/51 (94%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  49    GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTAT  99
             |||||||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct  1171  GGGATGACGCATGGGCAGTAAAGGTTTGGGTTCCGCCCTCACCACAGTTAT  1221


>gb|EU334546.1| Psoralea bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 23/23 (100%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  22    GTTAATCAGAACATGCATTCCCT  44
             |||||||||||||||||||||||
Sbjct  1366  GTTAATCAGAACATGCATTCCCT  1388


>gb|DQ898206.1| Hardenbergia mosaic virus isolate WHP-1 polyprotein gene, partial 
cds
Length=828

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 44/51 (86%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||||||||||||| |||||||||
Sbjct  763  AGGCACACTGCAAAGGATGTGAATGAGAACATGCATTCCCTTTTGGGGATG  813


>gb|DQ898202.1| Hardenbergia mosaic virus isolate Sb-19-1 polyprotein gene, partial 
cds
Length=828

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 44/51 (86%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||||| |||||||||||||| |||||||||
Sbjct  763  AGGCACACTGCAAAGGATGTCAATCAAAACATGCATTCCCTGTTGGGGATG  813


>gb|DQ898197.1| Hardenbergia mosaic virus isolate MU-3A polyprotein gene, partial 
cds
Length=828

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 44/51 (86%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||||||||||||| |||||||||
Sbjct  763  AGGCACACTGCAAAGGATGTGAATGAGAACATGCATTCCCTTTTGGGGATG  813


>gb|DQ898188.1| Hardenbergia mosaic virus isolate BB-6 polyprotein gene, partial 
cds
Length=828

 Score = 46.1 bits (23),  Expect = 0.024
 Identities = 44/51 (86%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||||||||||||| |||||||||
Sbjct  763  AGGCACACTGCAAAGGATGTGAATGAGAACATGCATTCCCTTTTGGGGATG  813


>gb|EU042755.1| Anemone mosaic virus polyprotein gene, partial cds
Length=1380

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 34/38 (89%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCA  38
             |||||||||||||| || | ||||| ||||||||||||
Sbjct  994   GAGAGGCACACTGCAACAGATGTTAGTCAGAACATGCA  1031


>gb|DQ898203.1| Hardenbergia mosaic virus isolate Sb-19-4 polyprotein gene, partial 
cds
Length=828

 Score = 44.1 bits (22),  Expect = 0.095
 Identities = 28/30 (93%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  25   AATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||| |||||||||||||| |||||||||
Sbjct  784  AATCAAAACATGCATTCCCTGTTGGGGATG  813


>gb|AY864850.1| Tricyrtis potyvirus polyprotein gene, partial cds
Length=1688

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 41/45 (91%), Gaps = 2/45 (4%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGG-TGTTAATCAGAACATGCATTCCCT  44
             |||||||||||||| || || |||||||||||||||||| |||||
Sbjct  1369  GAGAGGCACACTGC-ACGGGATGTTAATCAGAACATGCACTCCCT  1412


>gb|DQ851493.1| Telosma mosaic virus isolate Hanoi, complete genome
Length=9689

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 38/44 (86%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCT  44
             |||||||||||||| |  | ||| ||||||||||||||| ||||
Sbjct  9369  GAGAGGCACACTGCAAGAGATGTGAATCAGAACATGCATACCCT  9412


>emb|AM039800.1| Fritillary virus Y complete virion genome, isolate Pan'an
Length=9656

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 38/44 (86%), Gaps = 0/44 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCT  44
             |||||||||||||| |  | ||| |||||||| |||||||||||
Sbjct  9341  GAGAGGCACACTGCAAGGGATGTAAATCAGAATATGCATTCCCT  9384


>gb|EU334547.1| Bituminaria bituminosa mosaic virus isolate Coaraze polyprotein 
mRNA, partial cds
Length=1656

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  22    GTTAATCAGAACATGCATTCCCT  44
             |||||||| ||||||||||||||
Sbjct  1366  GTTAATCAAAACATGCATTCCCT  1388


>gb|EU035271.1| Malaysian Passiflora virus polyprotein mRNA, partial cds
Length=1242

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 31/35 (88%), Gaps = 0/35 (0%)
 Strand=Plus/Plus

Query  21    TGTTAATCAGAACATGCATTCCCTCTTGGGGATGA  55
             ||||||||||||||||||  |||| ||||| ||||
Sbjct  1194  TGTTAATCAGAACATGCACACCCTTTTGGGTATGA  1228


>gb|EF375608.1| Hardenbergia mosaic virus isolate Can1-2 coat protein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||||||||||||| || ||||||
Sbjct  763  AGGCACACTGCAAAGGATGTAAATGAGAACATGCATTCCCTTTTAGGGATG  813


>gb|EF375607.1| Hardenbergia mosaic virus isolate Can1-1 coat protein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||| ||||||||| |||||||||
Sbjct  763  AGGCACACTGCAAAGGATGTGAATGAGAACACGCATTCCCTTTTGGGGATG  813


>gb|DQ898200.1| Hardenbergia mosaic virus isolate Med-1 polyprotein gene, partial 
cds
Length=828

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| ||| |||||||||||||||| || ||||||
Sbjct  763  AGGCACACTGCAAAAGATGTAAATGAGAACATGCATTCCCTTTTAGGGATG  813


>gb|DQ898196.1| Hardenbergia mosaic virus isolate MU-2A polyprotein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| || ||||||||||||||| | |||||||||
Sbjct  757  AGGCACACTGCGAAGGATGTCAACCAGAACATGCATTCCTTGTTGGGGATG  807


>gb|DQ898195.1| Hardenbergia mosaic virus isolate MU-1C polyprotein gene, partial 
cds
Length=822

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 43/51 (84%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  4    AGGCACACTGCCACTGGTGTTAATCAGAACATGCATTCCCTCTTGGGGATG  54
            ||||||||||| |  | ||| || ||||||||||||||| | |||||||||
Sbjct  757  AGGCACACTGCGAAGGATGTCAACCAGAACATGCATTCCTTGTTGGGGATG  807



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1929334
Number of extensions: 118912
Number of successful extensions: 32950
Number of sequences better than 10: 15
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 32947
Number of HSP's successfully gapped: 15
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY87AN1X014


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|793-891
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   180    6e-43
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   172    2e-40
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   172    2e-40
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   172    2e-40
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   172    2e-40
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   172    2e-40
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   172    2e-40
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   172    2e-40
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   157    9e-36
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   149    2e-33
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   149    2e-33
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   149    2e-33
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   149    2e-33
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   143    1e-31
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   141    5e-31
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   141    5e-31
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   141    5e-31
gb|EF547367.1|  South African passiflora virus polyprotein gen...   133    1e-28
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   133    1e-28
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   127    8e-27
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   127    8e-27
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   127    8e-27
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   119    2e-24
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   113    1e-22
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   113    1e-22
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  95.6    3e-17
gb|AY253906.1|  Cowpea aphid-borne mosaic virus isolate PE2 po...  71.9    4e-10
gb|AY253911.1|  Cowpea aphid-borne mosaic virus isolate SE1 po...  65.9    3e-08
gb|AY253909.1|  Cowpea aphid-borne mosaic virus isolate PE4 po...  63.9    1e-07
gb|AY253908.1|  Cowpea aphid-borne mosaic virus isolate PE3 po...  63.9    1e-07
gb|AY253910.1|  Cowpea aphid-borne mosaic virus isolate PB2 po...  58.0    6e-06
gb|AY253907.1|  Cowpea aphid-borne mosaic virus isolate PB1 po...  56.0    3e-05
gb|AE013599.4|  Drosophila melanogaster chromosome 2R, complet...  38.2    5.9  
gb|AC142111.3|  Mus musculus BAC clone RP24-63G9 from chromoso...  38.2    5.9  
gb|AC127318.4|  Mus musculus BAC clone RP23-228J12 from chromo...  38.2    5.9  
emb|AL109838.11|  Human DNA sequence from clone RP4-796I8 on c...  38.2    5.9  
gb|AC116616.5|  Homo sapiens BAC clone RP11-51M24 from 4, comp...  38.2    5.9  
gb|AC007593.5|AC007593  Drosophila melanogaster, chromosome 2R...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  891


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  180 bits (91),  Expect = 6e-43
 Identities = 97/99 (97%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||| |||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  891


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1253  ATGCATTCCCTCTTAGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  1312

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||||||| |||||||||||||||||||||
Sbjct  1313  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  1351


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||  ||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCCTAGCTAATGGTTGGTTTTAG  891


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||  ||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCCTAGCTAATGGTTGGTTTTAG  891


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||  ||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCCTAGCTAATGGTTGGTTTTAG  891


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||  ||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCCTAGCTAATGGTTGGTTTTAG  891


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTAGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||| |||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  891


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  793  ATGCATTCCCTCTTAGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||| |||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  891


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||
Sbjct  793  ATGCATTCCCTCTTAGGGATGACGCATGGGCAGTAAAGGCTTGGGTTTCGCCCTCGCCAC  852

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||  |||||||||||||||||||||
Sbjct  853  AGTTATCGTCTCACGACCTTAGCTAATGGTTGGTTTTAG  891


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            |||||||||||||||||||||||||||||||||||||||| |||| || || ||||||||
Sbjct  793  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCCTGGGGTC-GCTCTCGCCAC  851

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||| |||||||||||||||||||||
Sbjct  852  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  890


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct  1420  ATGCACTCCCTCTTGGGAATGACGCATGGGCAGTAAAGGCTTGGGTTCCGCCCTCGCCAC  1479

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||| ||  |||||||||||||||||||||
Sbjct  1480  AGTTATCGTCTCATGACCTTAGCTAATGGTTGGTTTTAG  1518


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct  1033  ATGCACTCCCTCTTGGGGATGACGCATGGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCAC  1092

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||| ||  |||||||||||||||||||||
Sbjct  1093  AGTTATCGTCTCATGACCTTAGCTAATGGTTGGTTTTAG  1131


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1036  ATGCACTCCCTCTTGGGAATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  1095

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||| ||   ||||||||||||||||||||
Sbjct  1096  AGTTATCGTCTCATGACCCTAGCTAATGGTTGGTTTTAG  1134


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 94/100 (94%), Gaps = 1/100 (1%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTT-GGGTTCTGCCCTCGCCA  59
            ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||| 
Sbjct  793  ATGCATTCCCTTTTGGGAATGACGCATGGGCAGTAAAGGCTTTGGGTTCCGCCCTCGCCC  852

Query  60   CAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||| ||||||||||||||||||||||||||
Sbjct  853  CAGTTATCGTCTCCCGATTTTAGCTAATGGTTGGTTTTAG  892


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 80/83 (96%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  17   GGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGA  76
            |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct  812  GGATGACGCATGGGCAGTAAAGGCTTTGGTTCCGCCCTCGCCACAGTTATCGTCTCACGA  871

Query  77   TTTTAGCTAATGGTTGGTTTTAG  99
            | |||||||||||||||||||||
Sbjct  872  TCTTAGCTAATGGTTGGTTTTAG  894


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             ||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct  9202  ATGCACTCCCTCTTAGGGATGACGCATGGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCAC  9261

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||| ||  |||||||||||||||||||||
Sbjct  9262  AGTTATCGTCTCATGACCTTAGCTAATGGTTGGTTTTAG  9300


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             ||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct  958   ATGCACTCCCTCTTAGGGATGACGCATGGGCAGTGAAGGCTTGGGTTCCGCCCTCGCCAC  1017

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||| ||  |||||||||||||||||||||
Sbjct  1018  AGTTATCGTCTCATGACCTTAGCTAATGGTTGGTTTTAG  1056


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
             |||||||||||  | |||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct  1405  ATGCATTCCCTTCTCGGGATGACGCATGGGCAGTAAAGGTTTGGGTTCCGCCCTCACCAC  1464

Query  61    AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
             ||||||||||||||||  |||||||||||||||||||||
Sbjct  1465  AGTTATCGTCTCACGAACTTAGCTAATGGTTGGTTTTAG  1503


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCAC  60
            ||||||||||| ||||| |||||||||||||||||||||| ||||| | |||| ||||||
Sbjct  793  ATGCATTCCCTTTTGGGAATGACGCATGGGCAGTAAAGGCCTGGGTCC-GCCCCCGCCAC  851

Query  61   AGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAG  99
            ||||||||||||||||| |||||||||||||||||||||
Sbjct  852  AGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAG  890


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 79/84 (94%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16    GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACG  75
             |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct  1171  GGGATGACGCATGGGCAGTAAAGGTTTGGGTTCCGCCCTCACCACAGTTATCGTCTCACG  1230

Query  76    ATTTTAGCTAATGGTTGGTTTTAG  99
             |  |||||||||||||||||||||
Sbjct  1231  AACTTAGCTAATGGTTGGTTTTAG  1254


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 79/84 (94%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16    GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACG  75
             ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  1000  GGGATGAGGCATGGGCAGTAAAGGCTTGGGTTCAGCCCTCGCCACAGTTATCGTCTCACG  1059

Query  76    ATTTTAGCTAATGGTTGGTTTTAG  99
                |||||||||||||||||||||
Sbjct  1060  TCCTTAGCTAATGGTTGGTTTTAG  1083


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 79/84 (94%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16    GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACG  75
             |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct  1171  GGGATGACGCATGGGCAGTAAAGGTTTGGGTTCCGCCCTCACCACAGTTATCGTCTCACG  1230

Query  76    ATTTTAGCTAATGGTTGGTTTTAG  99
             |  |||||||||||||||||||||
Sbjct  1231  AACTTAGCTAATGGTTGGTTTTAG  1254


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  119 bits (60),  Expect = 2e-24
 Identities = 78/84 (92%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACG  75
            ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct  907  GGGATGAGGCATGGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACG  966

Query  76   ATTTTAGCTAATGGTTGGTTTTAG  99
               |||||||||||||||||||||
Sbjct  967  TCCTTAGCTAATGGTTGGTTTTAG  990


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 75/81 (92%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   ATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATT  78
            |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||   
Sbjct  886  ATGAGGCATGGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACGTCC  945

Query  79   TTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||||||
Sbjct  946  TTAGCTAATGGTTGGTTTTAG  966


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  113 bits (57),  Expect = 1e-22
 Identities = 75/81 (92%), Gaps = 0/81 (0%)
 Strand=Plus/Plus

Query  19   ATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATT  78
            |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||   
Sbjct  874  ATGAGGCATGGGCAGTAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACGTCC  933

Query  79   TTAGCTAATGGTTGGTTTTAG  99
            |||||||||||||||||||||
Sbjct  934  TTAGCTAATGGTTGGTTTTAG  954


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 75/84 (89%), Gaps = 0/84 (0%)
 Strand=Plus/Plus

Query  16   GGGATGACGCATGGGCAGTAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACG  75
            ||||||| |||||||||||||||| |||||| | |||||| |||||||||||||||||||
Sbjct  853  GGGATGAGGCATGGGCAGTAAAGGTTTGGGTCCAGCCCTCACCACAGTTATCGTCTCACG  912

Query  76   ATTTTAGCTAATGGTTGGTTTTAG  99
               ||| |||||||||||||||||
Sbjct  913  TCCTTAACTAATGGTTGGTTTTAG  936


>gb|AY253906.1| Cowpea aphid-borne mosaic virus isolate PE2 polyprotein mRNA, 
partial cds
Length=856

 Score = 71.9 bits (36),  Expect = 4e-10
 Identities = 36/36 (100%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAA  36
            ||||||||||||||||||||||||||||||||||||
Sbjct  821  ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAA  856


>gb|AY253911.1| Cowpea aphid-borne mosaic virus isolate SE1 polyprotein mRNA, 
partial cds
Length=841

 Score = 65.9 bits (33),  Expect = 3e-08
 Identities = 36/37 (97%), Gaps = 0/37 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAA  37
            |||||||||||||| ||||||||||||||||||||||
Sbjct  805  ATGCATTCCCTCTTAGGGATGACGCATGGGCAGTAAA  841


>gb|AY253909.1| Cowpea aphid-borne mosaic virus isolate PE4 polyprotein mRNA, 
partial cds
Length=856

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 35/36 (97%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAA  36
            ||||| ||||||||||||||||||||||||||||||
Sbjct  821  ATGCACTCCCTCTTGGGGATGACGCATGGGCAGTAA  856


>gb|AY253908.1| Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, 
partial cds
Length=831

 Score = 63.9 bits (32),  Expect = 1e-07
 Identities = 35/36 (97%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAA  36
            ||||| ||||||||||||||||||||||||||||||
Sbjct  796  ATGCACTCCCTCTTGGGGATGACGCATGGGCAGTAA  831


>gb|AY253910.1| Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, 
partial cds
Length=832

 Score = 58.0 bits (29),  Expect = 6e-06
 Identities = 35/37 (94%), Gaps = 0/37 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAAA  37
            ||||||||||| ||||| |||||||||||||||||||
Sbjct  796  ATGCATTCCCTTTTGGGAATGACGCATGGGCAGTAAA  832


>gb|AY253907.1| Cowpea aphid-borne mosaic virus isolate PB1 polyprotein mRNA, 
partial cds
Length=831

 Score = 56.0 bits (28),  Expect = 3e-05
 Identities = 34/36 (94%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  1    ATGCATTCCCTCTTGGGGATGACGCATGGGCAGTAA  36
            ||||||||||| ||||| ||||||||||||||||||
Sbjct  796  ATGCATTCCCTTTTGGGAATGACGCATGGGCAGTAA  831


>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
Length=21146708

 Features in this part of subject sequence:
   CG15908-PA

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  18       GATGACGCATGGGCAGTAA  36
                |||||||||||||||||||
Sbjct  2555747  GATGACGCATGGGCAGTAA  2555765


>gb|AC142111.3| Mus musculus BAC clone RP24-63G9 from chromosome 9, complete 
sequence
Length=185361

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  37     AGGCTTGGGTTCTGCCCTC  55
              |||||||||||||||||||
Sbjct  35798  AGGCTTGGGTTCTGCCCTC  35780


>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete 
sequence
Length=168789

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  37      AGGCTTGGGTTCTGCCCTC  55
               |||||||||||||||||||
Sbjct  158975  AGGCTTGGGTTCTGCCCTC  158957


>emb|AL109838.11| Human DNA sequence from clone RP4-796I8 on chromosome 20 Contains 
a putative novel gene, ESTs, STSs and GSSs, complete sequence
Length=121235

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  38      GGCTTGGGTTCTGCCCTCG  56
               |||||||||||||||||||
Sbjct  100753  GGCTTGGGTTCTGCCCTCG  100771


>gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complete sequence
Length=94560

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  29     GGCAGTAAAGGCTTGGGTT  47
              |||||||||||||||||||
Sbjct  36358  GGCAGTAAAGGCTTGGGTT  36376


>gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone 
BACR01C10, complete sequence
Length=173702

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  18      GATGACGCATGGGCAGTAA  36
               |||||||||||||||||||
Sbjct  126813  GATGACGCATGGGCAGTAA  126831



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1637394
Number of extensions: 77772
Number of successful extensions: 17128
Number of sequences better than 10: 8
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 17128
Number of HSP's successfully gapped: 8
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY88U9BB016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|826-924
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   172    2e-40
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   172    2e-40
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   165    4e-38
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   161    6e-37
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   157    9e-36
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   157    9e-36
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   157    9e-36
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   157    9e-36
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   153    1e-34
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   153    1e-34
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   153    1e-34
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   151    6e-34
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   151    6e-34
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   149    2e-33
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   149    2e-33
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   149    2e-33
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   149    2e-33
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   149    2e-33
gb|EF547367.1|  South African passiflora virus polyprotein gen...   141    5e-31
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...   141    5e-31
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   141    5e-31
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...   141    5e-31
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   137    9e-30
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   117    8e-24
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   117    8e-24
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   105    3e-20
gb|CP000393.1|  Trichodesmium erythraeum IMS101, complete genome   38.2    5.9  
gb|AC127348.4|  Mus musculus BAC clone RP23-57D10 from chromos...  38.2    5.9  
gb|AC142111.3|  Mus musculus BAC clone RP24-63G9 from chromoso...  38.2    5.9  
gb|AC127318.4|  Mus musculus BAC clone RP23-228J12 from chromo...  38.2    5.9  
emb|AL133268.15|  Human DNA sequence from clone RP3-425P12 on ...  38.2    5.9  
emb|AL109838.11|  Human DNA sequence from clone RP4-796I8 on c...  38.2    5.9  
gb|AC149611.6|  Mus musculus BAC clone RP23-157P4 from 7, comp...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  924


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct  1286  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGG  1345

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||||| ||||||||
Sbjct  1346  TTTTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  1384


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  172 bits (87),  Expect = 2e-40
 Identities = 96/99 (96%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            ||||||||||||||||||||||||||||||| |||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATCCAGTCAGACTATAT  924


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  165 bits (83),  Expect = 4e-38
 Identities = 95/99 (95%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||||||||  ||||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATCCAGTTGAACTATAT  924


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 87/89 (97%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGT  89
            |||||||||||||||||||||||||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATCCAGT  914


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTTCGCCCTCGCCACAGTTATCGTCTCACGACCTTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||||||||| ||||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  924


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct  829  TAAAGGCTTTGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGG  888

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||||||||  ||||||||
Sbjct  889  TTTTAGTAAATAGTACGCATATATCCAGTTGAACTATAT  927


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             ||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||
Sbjct  1453  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCATGACCTTAGCTAATGGTTGG  1512

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||||| ||||||||
Sbjct  1513  TTTTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  1551


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 94/99 (94%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             |||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||
Sbjct  1069  TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCATGACCCTAGCTAATGGTTGG  1128

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||||| ||||||||
Sbjct  1129  TTTTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  1167


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 92/97 (94%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3     AAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTT  62
             ||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||
Sbjct  9237  AAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCATGACCTTAGCTAATGGTTGGTT  9296

Query  63    TTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||| ||||||||
Sbjct  9297  TTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  9333


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 92/97 (94%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3     AAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTT  62
             ||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||
Sbjct  1068  AAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCATGACCTTAGCTAATGGTTGGTT  1127

Query  63    TTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||| ||||||||
Sbjct  1128  TTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  1164


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 92/97 (94%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  3     AAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTT  62
             ||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||
Sbjct  993   AAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCATGACCTTAGCTAATGGTTGGTT  1052

Query  63    TTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||||||||||||||||||||||| ||||||||
Sbjct  1053  TTAGTAAATAGTACGCATATATCCAGTCGAACTATAT  1089


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 79/80 (98%), Gaps = 0/80 (0%)
 Strand=Plus/Plus

Query  20   CTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAGTAAATAGTACGCA  79
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  844  CTCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAGTAAATAGTACGCA  903

Query  80   TATATCCAGTCAAACTATAT  99
            ||||||||||||||||||||
Sbjct  904  TATATCCAGTCAAACTATAT  923


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 88/92 (95%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  8    TTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAGT  67
            |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct  834  TTGGGTTCCGCCCTCGCCCCAGTTATCGTCTCCCGATTTTAGCTAATGGTTGGTTTTAGT  893

Query  68   AAATAGTACGCATATATCCAGTCAAACTATAT  99
            ||||||||||||||||||||||| ||||||||
Sbjct  894  AAATAGTACGCATATATCCAGTCGAACTATAT  925


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCCTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||| |||| || ||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATTCAGTTAAGCTATAT  924


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCCTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||| |||| || ||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATTCAGTTAAGCTATAT  924


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCCTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||| |||| || ||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATTCAGTTAAGCTATAT  924


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 93/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||
Sbjct  826  TAAAGGCTTGGGTTCCGCCCTCGCCACAGTTATCGTCTCACGATCCTAGCTAATGGTTGG  885

Query  61   TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||| |||| || ||||||
Sbjct  886  TTTTAGTAAATAGTACGCATATATTCAGTTAAGCTATAT  924


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 81/83 (97%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  17   GCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGGTTTTAGTAAATAGTAC  76
            |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  841  GCCCCCGCCACAGTTATCGTCTCACGATCTTAGCTAATGGTTGGTTTTAGTAAATAGTAC  900

Query  77   GCATATATCCAGTCAAACTATAT  99
            |||||||||||||||||||||||
Sbjct  901  GCATATATCCAGTCAAACTATAT  923


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             |||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||
Sbjct  1438  TAAAGGTTTGGGTTCCGCCCTCACCACAGTTATCGTCTCACGAACTTAGCTAATGGTTGG  1497

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||| |||||||||||||||||||| |||||||||
Sbjct  1498  TTTTAGTAGATAGTACGCATATATCCAGTTAAACTATAT  1536


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             |||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||
Sbjct  1189  TAAAGGTTTGGGTTCCGCCCTCACCACAGTTATCGTCTCACGAACTTAGCTAATGGTTGG  1248

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||| |||||||||||||||||||| |||||||||
Sbjct  1249  TTTTAGTAGATAGTACGCATATATCCAGTTAAACTATAT  1287


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             ||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||
Sbjct  925   TAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACGTCCTTAGCTAATGGTTGG  984

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             ||||||||||||||||||||||||||||| | |||||||
Sbjct  985   TTTTAGTAAATAGTACGCATATATCCAGTAAGACTATAT  1023


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             |||||| |||||||| |||||| ||||||||||||||||||||  |||||||||||||||
Sbjct  1189  TAAAGGTTTGGGTTCCGCCCTCACCACAGTTATCGTCTCACGAACTTAGCTAATGGTTGG  1248

Query  61    TTTTAGTAAATAGTACGCATATATCCAGTCAAACTATAT  99
             |||||||| |||||||||||||||||||| |||||||||
Sbjct  1249  TTTTAGTAGATAGTACGCATATATCCAGTTAAACTATAT  1287


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  137 bits (69),  Expect = 9e-30
 Identities = 84/89 (94%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  1     TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
             ||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||
Sbjct  1018  TAAAGGCTTGGGTTCAGCCCTCGCCACAGTTATCGTCTCACGTCCTTAGCTAATGGTTGG  1077

Query  61    TTTTAGTAAATAGTACGCATATATCCAGT  89
             |||||||| ||||||||||||||||||||
Sbjct  1078  TTTTAGTAGATAGTACGCATATATCCAGT  1106


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 77/83 (92%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||
Sbjct  901  TAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACGTCCTTAGCTAATGGTTGG  960

Query  61   TTTTAGTAAATAGTACGCATATA  83
            |||||||| ||||||||||||||
Sbjct  961  TTTTAGTAGATAGTACGCATATA  983


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 77/83 (92%), Gaps = 0/83 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            ||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||
Sbjct  889  TAAAGGCTTGGGTTCAGCCCTCGTCACAGTTATCGTCTCACGTCCTTAGCTAATGGTTGG  948

Query  61   TTTTAGTAAATAGTACGCATATA  83
            |||||||| ||||||||||||||
Sbjct  949  TTTTAGTAGATAGTACGCATATA  971


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  105 bits (53),  Expect = 3e-20
 Identities = 80/89 (89%), Gaps = 0/89 (0%)
 Strand=Plus/Plus

Query  1    TAAAGGCTTGGGTTCTGCCCTCGCCACAGTTATCGTCTCACGATTTTAGCTAATGGTTGG  60
            |||||| |||||| | |||||| |||||||||||||||||||   ||| |||||||||||
Sbjct  871  TAAAGGTTTGGGTCCAGCCCTCACCACAGTTATCGTCTCACGTCCTTAACTAATGGTTGG  930

Query  61   TTTTAGTAAATAGTACGCATATATCCAGT  89
            |||||||||||||||||| ||||||||||
Sbjct  931  TTTTAGTAAATAGTACGCTTATATCCAGT  959


>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome
Length=7750108

 Features flanking this part of subject sequence:
   273 bp at 5' side: adenosylmethionine decarboxylase proenzyme
   379 bp at 3' side: conserved hypothetical protein

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 22/23 (95%), Gaps = 0/23 (0%)
 Strand=Plus/Plus

Query  52       AATGGTTGGTTTTAGTAAATAGT  74
                |||||||||||||||| ||||||
Sbjct  3271959  AATGGTTGGTTTTAGTTAATAGT  3271981


>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete 
sequence
Length=229190

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  52     AATGGTTGGTTTTAGTAAA  70
              |||||||||||||||||||
Sbjct  97863  AATGGTTGGTTTTAGTAAA  97881


>gb|AC142111.3| Mus musculus BAC clone RP24-63G9 from chromosome 9, complete 
sequence
Length=185361

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  4      AGGCTTGGGTTCTGCCCTC  22
              |||||||||||||||||||
Sbjct  35798  AGGCTTGGGTTCTGCCCTC  35780


>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete 
sequence
Length=168789

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  4       AGGCTTGGGTTCTGCCCTC  22
               |||||||||||||||||||
Sbjct  158975  AGGCTTGGGTTCTGCCCTC  158957


>emb|AL133268.15| Human DNA sequence from clone RP3-425P12 on chromosome 6p21.33-22.3 
Contains 3 novel genes, a nucleoporin 50kD (NUP50) (NPAP60 
NPAP60L) pseudogene and the CMAH gene for cytidine monophosphate-N-acetylneuraminic 
acid hydroxylase (CMP-N-acetylneuraminate 
monooxygenase) (CSAH), complete sequence
Length=110794

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 25/27 (92%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  46     TTAGCTAATGGTTGGTTTTAGTAAATA  72
              |||||||||||||||||| | ||||||
Sbjct  33706  TTAGCTAATGGTTGGTTTAATTAAATA  33680


>emb|AL109838.11| Human DNA sequence from clone RP4-796I8 on chromosome 20 Contains 
a putative novel gene, ESTs, STSs and GSSs, complete sequence
Length=121235

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  5       GGCTTGGGTTCTGCCCTCG  23
               |||||||||||||||||||
Sbjct  100753  GGCTTGGGTTCTGCCCTCG  100771


>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence
Length=217353

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  52     AATGGTTGGTTTTAGTAAA  70
              |||||||||||||||||||
Sbjct  27012  AATGGTTGGTTTTAGTAAA  26994



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1631712
Number of extensions: 92948
Number of successful extensions: 31753
Number of sequences better than 10: 8
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 31753
Number of HSP's successfully gapped: 8
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





500 Missing newline after chunk data: '
171d'

<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY8C3G8D016


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|892-990
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   176    1e-41
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   176    1e-41
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   176    1e-41
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   168    2e-39
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   168    2e-39
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   167    1e-38
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   167    1e-38
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   163    1e-37
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   161    6e-37
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   161    6e-37
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   161    6e-37
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   161    6e-37
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   153    1e-34
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   151    6e-34
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   143    1e-31
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   143    1e-31
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   127    8e-27
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   127    8e-27
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   123    1e-25
gb|EF547367.1|  South African passiflora virus polyprotein gen...   109    2e-21
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   101    5e-19
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  95.6    3e-17
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  95.6    3e-17
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...  93.7    1e-16
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...  93.7    1e-16
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  75.8    3e-11
gb|AC009659.5|  Homo sapiens chromosome 11, clone RP11-362G8, ...  42.1    0.38 
emb|AL133376.6|  Human DNA sequence from clone RP1-76K20 on ch...  42.1    0.38 
emb|AL353748.13|  Human DNA sequence from clone RP11-317B17 on...  40.1    1.5  
gb|AC093590.2|  Homo sapiens BAC clone RP11-47G14 from 2, comp...  40.1    1.5  
emb|BX248511.4|  Zebrafish DNA sequence from clone CH211-243G1...  40.1    1.5  
emb|CU467904.9|  Zebrafish DNA sequence from clone CH73-309F12...  38.2    5.9  
gb|AC196220.4|  MACACA MULATTA BAC clone CH250-369M2 from chro...  38.2    5.9  
emb|AM467565.1|  Vitis vinifera contig VV78X007458.6, whole ge..>  38.2    5.9  
emb|CT826389.8|  Zebrafish DNA sequence from clone CH73-159H15...  38.2    5.9  
gb|AC124478.5|  Mus musculus BAC clone RP24-105I8 from chromos...  38.2    5.9  
gb|AC122873.5|  Mus musculus BAC clone RP23-110K10 from 8, com...  38.2    5.9  
emb|AL162596.30|  Human DNA sequence from clone RP1-13P20 on c...  38.2    5.9  
emb|AJ314612.1|STU314612  Solanum tuberosum mRNA for storekeep...  38.2    5.9  
gb|AF528097.1|  Clostridium tetani E88 plasmid pE88, complete ...  38.2    5.9  
emb|AL844568.13|  Mouse DNA sequence from clone RP23-369H9 on ...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGC  99
            |||||||||||||||||||||||||||||||||||||||
Sbjct  952  TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGC  990


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  176 bits (89),  Expect = 1e-41
 Identities = 95/97 (97%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  1519  TAAATAGTACGCATATATCCAGTCGAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  1578

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  1579  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1615


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  176 bits (89),  Expect = 1e-41
 Identities = 95/97 (97%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  9301  TAAATAGTACGCATATATCCAGTCGAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  9360

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  9361  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  9397


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  176 bits (89),  Expect = 1e-41
 Identities = 95/97 (97%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  1057  TAAATAGTACGCATATATCCAGTCGAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  1116

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  1117  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1153


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  168 bits (85),  Expect = 2e-39
 Identities = 94/97 (96%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct  1352  TAAATAGTACGCATATATCCAGTCGAACTATATATGCTAGTGTGGTTTTCCACCAGTATG  1411

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  1412  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1448


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  168 bits (85),  Expect = 2e-39
 Identities = 94/97 (96%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct  1135  TAAATAGTACGCATATATCCAGTSGAACTATATATGTTAGTGTGGTCTTCCACCAGTATG  1194

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  1195  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1231


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  167 bits (84),  Expect = 1e-38
 Identities = 93/96 (96%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  891  TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTCCCACCAGTATG  950

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            |||| |||||||||| ||||||||||||||||||||
Sbjct  951  TTATATTACTTTAATTGAACTTAGCGGAGAGGCCAT  986


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  167 bits (84),  Expect = 1e-38
 Identities = 93/96 (96%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  891  TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTCCCACCAGTATG  950

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            |||| |||||||||| ||||||||||||||||||||
Sbjct  951  TTATATTACTTTAATTGAACTTAGCGGAGAGGCCAT  986


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  163 bits (82),  Expect = 1e-37
 Identities = 95/98 (96%), Gaps = 1/98 (1%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTT-CCACCAGTAT  59
            |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct  892  TAAATAGTACGCATATATCCAGTCGAACTATATATGTTAGTGTGGTTTTTCCACCAGTAT  951

Query  60   GTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
            |||||||||||||||| |||||||||||||||||||||
Sbjct  952  GTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  989


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATCCAGTTGAACTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
            ||||||||||||||| |||||||||||||||||||||
Sbjct  952  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  988


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATCCAGTCAGACTATATATGCTAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
            ||||||||||| ||| |||||||||||||||||||||
Sbjct  952  TTATGTTACTTAAATTGAACTTAGCGGAGAGGCCATA  988


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||
Sbjct  895  TAAATAGTACGCATATATCCAGTTGAACTATATATGTCAGTGTGGTTTTCCACCAGTATG  954

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
            ||||||||||||||| |||||||||||||||||||||
Sbjct  955  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  991


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
             |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct  1132  TAAATAGTACGCATATATCCAGTCGAACTATATATGTTAGCGTGGTCTTCCACCAGTATG  1191

Query  61    TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||||| |||||||||||||||||||||
Sbjct  1192  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1228


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 92/97 (94%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATCCAGTTGGACTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
            ||||||||||||||| |||||||||||||||||||||
Sbjct  952  TTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  988


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  151 bits (76),  Expect = 6e-34
 Identities = 91/96 (94%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct  893  TAAATAGTACGCATATATCCAGTCGAACTATATATGCTAGTGTGGTTTTCCCCCAGTATG  952

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            ||||||| ||||||| ||||||||||||||||||||
Sbjct  953  TTATGTTCCTTTAATTGAACTTAGCGGAGAGGCCAT  988


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 90/96 (93%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATTCAGTTAAGCTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            ||||||||||||||| ||||||||| ||||||||||
Sbjct  952  TTATGTTACTTTAATTGAACTTAGCAGAGAGGCCAT  987


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 90/96 (93%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATTCAGTTAAGCTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            ||||||||||||||| ||||||||| ||||||||||
Sbjct  952  TTATGTTACTTTAATTGAACTTAGCAGAGAGGCCAT  987


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATTCAGTTAAGCTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            |||||||  |||||| ||||||||| ||||||||||
Sbjct  952  TTATGTTCATTTAATTGAACTTAGCAGAGAGGCCAT  987


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  127 bits (64),  Expect = 8e-27
 Identities = 88/96 (91%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCCACCAGTATG  60
            |||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||
Sbjct  892  TAAATAGTACGCATATATTCAGTTAAGCTATATATGTCAGTGTGGTTTTCCACCAGTATG  951

Query  61   TTATGTTACTTTAATCGAACTTAGCGGAGAGGCCAT  96
            |||||||  |||||| ||||||||| ||||||||||
Sbjct  952  TTATGTTCATTTAATTGAACTTAGCAGAGAGGCCAT  987


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  123 bits (62),  Expect = 1e-25
 Identities = 90/98 (91%), Gaps = 1/98 (1%)
 Strand=Plus/Plus

Query  1     TAAATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCC-ACCAGTAT  59
             ||||||||||||||||||||||| | |||||||||||||||||||   ||| ||||||| 
Sbjct  991   TAAATAGTACGCATATATCCAGTAAGACTATATATGTTAGTGTGGGCGTCCCACCAGTAC  1050

Query  60    GTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             |||||||||||||||| |||||||||||||||||||||
Sbjct  1051  GTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1088


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCC-ACCAGTATGTT  62
             |||||||||||||||||||| ||||||||||||||||||||| |  || ||| ||  |||
Sbjct  1507  ATAGTACGCATATATCCAGTTAAACTATATATGTTAGTGTGGGTCACCCACCGGTGCGTT  1566

Query  63    ATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||| |||||||||||||||||||||
Sbjct  1567  ATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1601


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  101 bits (51),  Expect = 5e-19
 Identities = 86/95 (90%), Gaps = 2/95 (2%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCC-ACCAGTATGTT  62
             ||||||||||||||||||||  | |||||||||||||||||| || || ||||||| || 
Sbjct  1087  ATAGTACGCATATATCCAGTTTA-CTATATATGTTAGTGTGGGTTGCCCACCAGTACGTC  1145

Query  63    ATGTTACTTTAATSGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||| |||||||||||||||||||||
Sbjct  1146  ATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1180


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 86/96 (89%), Gaps = 2/96 (2%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGT-GGTTTTCCACCAG-TATGT  61
             |||||||||||||||||||| ||||||||||||||||||| |||   ||||| | |  ||
Sbjct  1258  ATAGTACGCATATATCCAGTTAAACTATATATGTTAGTGTGGGTCACCCACCGGTTGCGT  1317

Query  62    TATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             |||||||||||||| |||||||||||||||||||||
Sbjct  1318  TATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1353


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 95.6 bits (48),  Expect = 3e-17
 Identities = 86/96 (89%), Gaps = 2/96 (2%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGT-GGTTTTCCACCAG-TATGT  61
             |||||||||||||||||||| ||||||||||||||||||| |||   ||||| | |  ||
Sbjct  1258  ATAGTACGCATATATCCAGTTAAACTATATATGTTAGTGTGGGTCACCCACCGGTTGCGT  1317

Query  62    TATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             |||||||||||||| |||||||||||||||||||||
Sbjct  1318  TATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1353


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 84/95 (88%), Gaps = 1/95 (1%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCC-ACCAGTATGTT  62
             ||||||||||||||  |||| | |||||||||| ||||||||   ||| ||||||| |||
Sbjct  970   ATAGTACGCATATAATCAGTAAGACTATATATGCTAGTGTGGGCATCCCACCAGTACGTT  1029

Query  63    ATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||| |||||||||||||||||||||
Sbjct  1030  ATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1064


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score = 93.7 bits (47),  Expect = 1e-16
 Identities = 84/95 (88%), Gaps = 1/95 (1%)
 Strand=Plus/Plus

Query  4     ATAGTACGCATATATCCAGTCAAACTATATATGTTAGTGTGGTTTTCC-ACCAGTATGTT  62
             ||||||||||||||  |||| | |||||||||| ||||||||   ||| ||||||| |||
Sbjct  958   ATAGTACGCATATAATCAGTAAGACTATATATGCTAGTGTGGGCATCCCACCAGTACGTT  1017

Query  63    ATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||||||||||| |||||||||||||||||||||
Sbjct  1018  ATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1052


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 75.8 bits (38),  Expect = 3e-11
 Identities = 50/54 (92%), Gaps = 0/54 (0%)
 Strand=Plus/Plus

Query  44    GGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  97
             ||||| ||||||||| |||||||||||||| |||||||||| ||||||||||||
Sbjct  981   GGTTTCCCACCAGTACGTTATGTTACTTTAGTCGAACTTAGTGGAGAGGCCATA  1034


>gb|AC009659.5| Homo sapiens chromosome 11, clone RP11-362G8, complete sequence
Length=175372

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  53     CCAGTATGTTATGTTACTTTA  73
              |||||||||||||||||||||
Sbjct  52108  CCAGTATGTTATGTTACTTTA  52128


>emb|AL133376.6| Human DNA sequence from clone RP1-76K20 on chromosome 11p13-14.3 
Contains GSSs, complete sequence
Length=99228

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  53     CCAGTATGTTATGTTACTTTA  73
              |||||||||||||||||||||
Sbjct  35936  CCAGTATGTTATGTTACTTTA  35956


>emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on chromosome 9 Contains 
the SPIN gene for spindlin, a heterogeneous nuclear ribonucleoprotein 
A1 (HNRPA1) pseudogene and a CpG island, complete 
sequence
Length=179155

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  57     TATGTTATGTTACTTTAATC  76
              ||||||||||||||||||||
Sbjct  26282  TATGTTATGTTACTTTAATC  26263


>gb|AC093590.2| Homo sapiens BAC clone RP11-47G14 from 2, complete sequence
Length=126965

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  30      ATATATGTTAGTGTGGTTTT  49
               ||||||||||||||||||||
Sbjct  109342  ATATATGTTAGTGTGGTTTT  109361


>emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 in linkage group 
10 Contains the 5' end of a novel gene, the gene for a novel 
keratin family protein and a CpG island, complete sequence
Length=176986

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  20     CAGTCAAACTATATATGTTA  39
              ||||||||||||||||||||
Sbjct  93316  CAGTCAAACTATATATGTTA  93297


>emb|CU467904.9| Zebrafish DNA sequence from clone CH73-309F12 in linkage group 
10, complete sequence
Length=115119

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  32      ATATGTTAGTGTGGTTTTC  50
               |||||||||||||||||||
Sbjct  112229  ATATGTTAGTGTGGTTTTC  112211


>gb|AC196220.4| MACACA MULATTA BAC clone CH250-369M2 from chromosome 1, complete 
sequence
Length=169505

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  38      TAGTGTGGTTTTCCACCAG  56
               |||||||||||||||||||
Sbjct  145757  TAGTGTGGTTTTCCACCAG  145775


>emb|AM467565.1| Vitis vinifera contig VV78X007458.6, whole genome shotgun sequence
Length=10809

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  44    GGTTTTCCACCAGTATGTT  62
             |||||||||||||||||||
Sbjct  8475  GGTTTTCCACCAGTATGTT  8457


>emb|CT826389.8| Zebrafish DNA sequence from clone CH73-159H15 in linkage group 
4, complete sequence
Length=124788

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  32     ATATGTTAGTGTGGTTTTC  50
              |||||||||||||||||||
Sbjct  72279  ATATGTTAGTGTGGTTTTC  72297


>gb|AC124478.5| Mus musculus BAC clone RP24-105I8 from chromosome 8, complete 
sequence
Length=159317

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 25/27 (92%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  49     TCCACCAGTATGTTATGTTACTTTAAT  75
              |||||||||||| ||| ||||||||||
Sbjct  31393  TCCACCAGTATGGTATATTACTTTAAT  31367


>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence
Length=199474

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 25/27 (92%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  49      TCCACCAGTATGTTATGTTACTTTAAT  75
               |||||||||||| ||| ||||||||||
Sbjct  136938  TCCACCAGTATGGTATATTACTTTAAT  136912


>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 
Contains the SPRL2A gene for small proline rich-like (epidermal 
differentiation complex) 2A, the LEP1 gene for late 
envelope protein 1, a novel gene, the MCSP gene for mitochondrial 
capsule selenoprotein and the IVL gene for involucrin, 
complete sequence
Length=116067

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  38     TAGTGTGGTTTTCCACCAG  56
              |||||||||||||||||||
Sbjct  43493  TAGTGTGGTTTTCCACCAG  43475


>emb|AJ314612.1|STU314612 Solanum tuberosum mRNA for storekeeper protein (STK gene)
Length=1683

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  28    CTATATATGTTAGTGTGGT  46
             |||||||||||||||||||
Sbjct  1459  CTATATATGTTAGTGTGGT  1477


>gb|AF528097.1| Clostridium tetani E88 plasmid pE88, complete sequence
Length=74082

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  57     TATGTTATGTTACTTTAAT  75
              |||||||||||||||||||
Sbjct  49001  TATGTTATGTTACTTTAAT  48983


>emb|AL844568.13| Mouse DNA sequence from clone RP23-369H9 on chromosome 2 Contains 
the 5' end of the gene for a novel zinc finger protein, 
a novel gene similar to KRAB zinc finger protein 6D, two novel 
pseudogenes and a BTB (POZ) domain containing 1 (Btbd1) 
pseudogene, complete sequence
Length=140495

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  33      TATGTTAGTGTGGTTTTCC  51
               |||||||||||||||||||
Sbjct  131046  TATGTTAGTGTGGTTTTCC  131064



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 3134224
Number of extensions: 152809
Number of successful extensions: 38554
Number of sequences better than 10: 3
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 38554
Number of HSP's successfully gapped: 3
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY8DV6FV011


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|925-1023
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   161    6e-37
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   161    6e-37
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   157    9e-36
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   153    1e-34
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   149    2e-33
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   149    2e-33
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   149    2e-33
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   149    2e-33
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   149    2e-33
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   149    2e-33
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   145    4e-32
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   145    4e-32
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   145    4e-32
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   143    1e-31
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   135    3e-29
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   133    1e-28
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   133    1e-28
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   129    2e-27
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   111    5e-22
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   105    3e-20
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   103    1e-19
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   103    1e-19
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...  99.6    2e-18
gb|EF547367.1|  South African passiflora virus polyprotein gen...  83.8    1e-13
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  83.8    1e-13
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  83.8    1e-13
gb|AC009659.5|  Homo sapiens chromosome 11, clone RP11-362G8, ...  42.1    0.38 
emb|AL133376.6|  Human DNA sequence from clone RP1-76K20 on ch...  42.1    0.38 
emb|AL353748.13|  Human DNA sequence from clone RP11-317B17 on...  40.1    1.5  
ref|XM_001451429.1|  Paramecium tetraurelia hypothetical prote...  38.2    5.9  
gb|AC196220.4|  MACACA MULATTA BAC clone CH250-369M2 from chro...  38.2    5.9  
emb|AM467565.1|  Vitis vinifera contig VV78X007458.6, whole ge...  38.2    5.9  
gb|AC124478.5|  Mus musculus BAC clone RP24-105I8 from chromos...  38.2    5.9  
gb|AC122873.5|  Mus musculus BAC clone RP23-110K10 from 8, com...  38.2    5.9  
emb|AL162596.30|  Human DNA sequence from clone RP1-13P20 on c...  38.2    5.9  
gb|AF528097.1|  Clostridium tetani E88 plasmid pE88, complete ...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925   ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             |||||||||||||||||||||||||||||||||||||||
Sbjct  985   CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  1023


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 94/97 (96%), Gaps = 1/97 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCA  97
             |||| ||||||||||||||||||||||||||||||||
Sbjct  985   CATA-CCCCGGTTGGAGTGCTCAGAGTGATTGTATCA  1020


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  161 bits (81),  Expect = 6e-37
 Identities = 93/97 (95%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCA  97
             |||| |||||||||||||||||||||||| |||||||
Sbjct  985   CATAACCCCGGTTGGAGTGCTCAGAGTGAGTGTATCA  1021


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 95/99 (95%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1552  ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  1611

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             |||| |||||||||||||||||||||||| ||| |||||
Sbjct  1612  CATA-CCCCGGTTGGAGTGCTCAGAGTGACTGTGTCACG  1649


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  153 bits (77),  Expect = 1e-34
 Identities = 92/97 (94%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  928   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  987

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCA  97
             |||| |||||||| ||||||||||||||| |||||||
Sbjct  988   CATAACCCCGGTTTGAGTGCTCAGAGTGAGTGTATCA  1024


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCAGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||| ||||||||||||||||||||||||||| |||||||
Sbjct  985   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATCACG  1022


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCAGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||| ||||||||||||||||||||||||||| |||||||
Sbjct  985   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATCACG  1022


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||
Sbjct  924   ATGTTAGTGTGGTTTCCCACCAGTATGTTATATTACTTTAATTGAACTTAGCGGAGAGGC  983

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||| ||||||||||||||||||||||||||||| |||||
Sbjct  984   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTGTGTCACG  1021


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 91/95 (95%), Gaps = 1/95 (1%)
 Strand=Plus/Plus

Query  5     TAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  64
             |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct  929   TAGTGTGGTTTTCCACCAGTATGTTATGTTACTTAAATTGAACTTAGCGGAGAGGCCATA  988

Query  65    GCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
              |||||||||||||||||||||||||||| |||||
Sbjct  989   -CCCCGGTTGGAGTGCTCAGAGTGATTGTGTCACG  1022


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||
Sbjct  924   ATGTTAGTGTGGTTTCCCACCAGTATGTTATATTACTTTAATTGAACTTAGCGGAGAGGC  983

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||| ||||||||||||||||||||||||||||| |||||
Sbjct  984   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTGTGTCACG  1021


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1168  ATGTTAGTGTGGTCTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  1227

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             |||| |||||||||||||||||||||||| ||| |||||
Sbjct  1228  CATA-CCCCGGTTGGAGTGCTCAGAGTGACTGTGTCACG  1265


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 83/85 (97%), Gaps = 1/85 (1%)
 Strand=Plus/Plus

Query  5     TAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  64
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  1389  TAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA  1448

Query  65    GCCCCGGTTGGAGTGCTCAGAGTGA  89
              ||||||||||||||||||||||||
Sbjct  1449  -CCCCGGTTGGAGTGCTCAGAGTGA  1472


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 86/89 (96%), Gaps = 1/89 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  9334  ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  9393

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGA  89
             |||| ||||||||||||||||||| ||||
Sbjct  9394  CATA-CCCCGGTTGGAGTGCTCAGGGTGA  9421


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 86/89 (96%), Gaps = 1/89 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1090  ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  1149

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGA  89
             |||| ||||||||||||||||||| ||||
Sbjct  1150  CATA-CCCCGGTTGGAGTGCTCAGGGTGA  1177


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  143 bits (72),  Expect = 1e-31
 Identities = 95/100 (95%), Gaps = 2/100 (2%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTT-CCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGG  59
             |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct  925   ATGTTAGTGTGGTTTTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGG  984

Query  60    CCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||||| |||||||||||||||||||||||| ||| |||||
Sbjct  985   CCATA-CCCCGGTTGGAGTGCTCAGAGTGACTGTGTCACG  1023


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  135 bits (68),  Expect = 3e-29
 Identities = 84/88 (95%), Gaps = 1/88 (1%)
 Strand=Plus/Plus

Query  5     TAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATA  64
             |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| 
Sbjct  930   TAGTGTGGTTTTCCCCCAGTATGTTATGTTCCTTTAATTGAACTTAGCGGAGAGGCCAT-  988

Query  65    GCCCCGGTTGGAGTGCTCAGAGTGATTG  92
             ||||||||||||||||||||||||||||
Sbjct  989   GCCCCGGTTGGAGTGCTCAGAGTGATTG  1016


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| |||||||||||||||||||||||||||||  |||||| ||||||||| |||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTCATTTAATTGAACTTAGCAGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             ||| ||||||||||||||||||||||||||| |||||||
Sbjct  985   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATCACG  1022


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1165  ATGTTAGCGTGGTCTTCCACCAGTATGTTATGTTACTTTAATTGAACTTAGCGGAGAGGC  1224

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCACG  99
             |||| ||||||||||||||||||| |||| ||| |||||
Sbjct  1225  CATA-CCCCGGTTGGAGTGCTCAGGGTGACTGTGTCACG  1262


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  129 bits (65),  Expect = 2e-27
 Identities = 90/97 (92%), Gaps = 1/97 (1%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGC  60
             |||| |||||||||||||||||||||||||||||  |||||| ||||||||| |||||||
Sbjct  925   ATGTCAGTGTGGTTTTCCACCAGTATGTTATGTTCATTTAATTGAACTTAGCAGAGAGGC  984

Query  61    CATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATCA  97
             ||| ||||||||||||||||||||||||||| |||||
Sbjct  985   CAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATCA  1020


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  111 bits (56),  Expect = 5e-22
 Identities = 69/72 (95%), Gaps = 1/72 (1%)
 Strand=Plus/Plus

Query  17    CCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGA  76
             ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct  1041  CCACCAGTACGTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGA  1099

Query  77    GTGCTCAGAGTG  88
             ||||||||||||
Sbjct  1100  GTGCTCAGAGTG  1111


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  105 bits (53),  Expect = 3e-20
 Identities = 82/89 (92%), Gaps = 2/89 (2%)
 Strand=Plus/Plus

Query  1     ATGTTAGTGTGGTTTTCC-ACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGG  59
             |||||||||||| || || ||||||| || ||||||||||||| ||||||||||||||||
Sbjct  1116  ATGTTAGTGTGGGTTGCCCACCAGTACGTCATGTTACTTTAATTGAACTTAGCGGAGAGG  1175

Query  60    CCATAGCCCCGGTTGGAGTGCTCAGAGTG  88
             ||||| |||||||||||||||||||||||
Sbjct  1176  CCATA-CCCCGGTTGGAGTGCTCAGAGTG  1203


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 68/72 (94%), Gaps = 1/72 (1%)
 Strand=Plus/Plus

Query  17    CCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGA  76
             ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||
Sbjct  1017  CCACCAGTACGTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTCGGA  1075

Query  77    GTGCTCAGAGTG  88
             ||||||||||||
Sbjct  1076  GTGCTCAGAGTG  1087


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  103 bits (52),  Expect = 1e-19
 Identities = 68/72 (94%), Gaps = 1/72 (1%)
 Strand=Plus/Plus

Query  17    CCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGA  76
             ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||
Sbjct  1005  CCACCAGTACGTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTCGGA  1063

Query  77    GTGCTCAGAGTG  88
             ||||||||||||
Sbjct  1064  GTGCTCAGAGTG  1075


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score = 99.6 bits (50),  Expect = 2e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand=Plus/Plus

Query  11    GGTTTTCCACCAGTATGTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCG  70
             ||||| ||||||||| |||||||||||||| |||||||||| |||||||||||| |||||
Sbjct  981   GGTTTCCCACCAGTACGTTATGTTACTTTAGTCGAACTTAGTGGAGAGGCCATA-CCCCG  1039

Query  71    GTTGGAGTGCTCAGAGTG  88
             |||||||| |||||||||
Sbjct  1040  GTTGGAGTACTCAGAGTG  1057


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 58/62 (93%), Gaps = 1/62 (1%)
 Strand=Plus/Plus

Query  27    GTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAG  86
             |||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||
Sbjct  1564  GTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAG  1622

Query  87    TG  88
             ||
Sbjct  1623  TG  1624


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 58/62 (93%), Gaps = 1/62 (1%)
 Strand=Plus/Plus

Query  27    GTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAG  86
             |||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||
Sbjct  1316  GTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAG  1374

Query  87    TG  88
             ||
Sbjct  1375  TG  1376


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 83.8 bits (42),  Expect = 1e-13
 Identities = 58/62 (93%), Gaps = 1/62 (1%)
 Strand=Plus/Plus

Query  27    GTTATGTTACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAG  86
             |||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||
Sbjct  1316  GTTATGTTACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAG  1374

Query  87    TG  88
             ||
Sbjct  1375  TG  1376


>gb|AC009659.5| Homo sapiens chromosome 11, clone RP11-362G8, complete sequence
Length=175372

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  20     CCAGTATGTTATGTTACTTTA  40
              |||||||||||||||||||||
Sbjct  52108  CCAGTATGTTATGTTACTTTA  52128


>emb|AL133376.6| Human DNA sequence from clone RP1-76K20 on chromosome 11p13-14.3 
Contains GSSs, complete sequence
Length=99228

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  20     CCAGTATGTTATGTTACTTTA  40
              |||||||||||||||||||||
Sbjct  35936  CCAGTATGTTATGTTACTTTA  35956


>emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on chromosome 9 Contains 
the SPIN gene for spindlin, a heterogeneous nuclear ribonucleoprotein 
A1 (HNRPA1) pseudogene and a CpG island, complete 
sequence
Length=179155

 Score = 40.1 bits (20),  Expect = 1.5
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  24     TATGTTATGTTACTTTAATC  43
              ||||||||||||||||||||
Sbjct  26282  TATGTTATGTTACTTTAATC  26263


>ref|XM_001451429.1| Paramecium tetraurelia hypothetical protein (GSPATT00018287001) 
partial mRNA
Length=8493

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  80    CTCAGAGTGATTGTATCAC  98
             |||||||||||||||||||
Sbjct  1181  CTCAGAGTGATTGTATCAC  1199


>gb|AC196220.4| MACACA MULATTA BAC clone CH250-369M2 from chromosome 1, complete 
sequence
Length=169505

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  5       TAGTGTGGTTTTCCACCAG  23
               |||||||||||||||||||
Sbjct  145757  TAGTGTGGTTTTCCACCAG  145775


>emb|AM467565.1| Vitis vinifera contig VV78X007458.6, whole genome shotgun sequence
Length=10809

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  11    GGTTTTCCACCAGTATGTT  29
             |||||||||||||||||||
Sbjct  8475  GGTTTTCCACCAGTATGTT  8457


>gb|AC124478.5| Mus musculus BAC clone RP24-105I8 from chromosome 8, complete 
sequence
Length=159317

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 25/27 (92%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  16     TCCACCAGTATGTTATGTTACTTTAAT  42
              |||||||||||| ||| ||||||||||
Sbjct  31393  TCCACCAGTATGGTATATTACTTTAAT  31367


>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence
Length=199474

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 25/27 (92%), Gaps = 0/27 (0%)
 Strand=Plus/Minus

Query  16      TCCACCAGTATGTTATGTTACTTTAAT  42
               |||||||||||| ||| ||||||||||
Sbjct  136938  TCCACCAGTATGGTATATTACTTTAAT  136912


>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 
Contains the SPRL2A gene for small proline rich-like (epidermal 
differentiation complex) 2A, the LEP1 gene for late 
envelope protein 1, a novel gene, the MCSP gene for mitochondrial 
capsule selenoprotein and the IVL gene for involucrin, 
complete sequence
Length=116067

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  5      TAGTGTGGTTTTCCACCAG  23
              |||||||||||||||||||
Sbjct  43493  TAGTGTGGTTTTCCACCAG  43475


>gb|AF528097.1| Clostridium tetani E88 plasmid pE88, complete sequence
Length=74082

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  24     TATGTTATGTTACTTTAAT  42
              |||||||||||||||||||
Sbjct  49001  TATGTTATGTTACTTTAAT  48983



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1728452
Number of extensions: 84888
Number of successful extensions: 23792
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 23791
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





<p><!--
QBlastInfoBegin
	Status=READY
QBlastInfoEnd
--><p>
<PRE>
BLASTN 2.2.18 (Mar-02-2008)
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro 
A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David 
J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation 
of protein database search programs", Nucleic Acids 
Res. 25:3389-3402.

RID: XY8FEMRP011


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           6,621,681 sequences; 23,265,459,605 total letters
Query=  gi|89145890|gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr 
coat protein (CP) mRNA, partial cds|958-1056
Length=99


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|DQ397525.1|  Cowpea aphid-borne mosaic virus isolate MG-Avr...   196    1e-47
gb|DQ397532.1|  Cowpea aphid-borne mosaic virus isolate DF-Brs...   157    9e-36
gb|DQ397528.1|  Cowpea aphid-borne mosaic virus isolate BA-Itb...   157    9e-36
gb|EU004070.2|  Cowpea aphid-borne mosaic virus isolate Cr pol...   149    2e-33
gb|AY433950.1|  Passion fruit woodiness virus strain PWV-SP co...   149    2e-33
gb|DQ397531.1|  Cowpea aphid-borne mosaic virus isolate SP-Prp...   149    2e-33
gb|DQ397529.1|  Cowpea aphid-borne mosaic virus isolate ES-Vni...   149    2e-33
emb|Y17822.1|CMV17822  Cowpea aphid-borne mosaic potyvirus cp ...   149    2e-33
emb|AJ132414.1|CAP132414  Cowpea aphid-borne mosaic virus gene...   149    2e-33
gb|AF368424.1|  Crotalaria mosaic potyvirus polyprotein gene, ...   145    4e-32
gb|AY433951.1|  Passion fruit woodiness virus strain F-101 coa...   141    5e-31
gb|DQ397530.1|  Cowpea aphid-borne mosaic virus isolate SP-Vcz...   141    5e-31
gb|U90326.1|SIU90326  Sesame mosaic potyvirus polyprotein (CP)...   141    5e-31
gb|AF241233.1|AF241233  Cowpea aphid-borne mosaic virus polypr...   141    5e-31
gb|AY434454.1|  Passion fruit woodiness virus strain PWV-M3 co...   135    3e-29
gb|AY433952.1|  Passion fruit woodiness virus strain PWV-M2 co...   135    3e-29
gb|AY505342.1|  Passion fruit woodiness virus strain F-144 pol...   133    1e-28
gb|DQ397526.1|  Cowpea aphid-borne mosaic virus isolate PE-Bnt...   133    1e-28
gb|AF348210.1|  Cowpea aphid-borne mosaic virus polyprotein ge...   133    1e-28
emb|X82873.1|CABMVCOAT  Cowpea aphid borne mosaic virus RNA fo...   133    1e-28
emb|Y18634.1|CABM18634  Cowpea aphid-borne mosaic virus gene e...   125    3e-26
emb|Y17824.1|CMV17824  Cowpea aphid-borne mosaic potyvirus cp ...   125    3e-26
gb|AF083558.1|AF083558  Cowpea aphid-borne mosaic virus NIb pr...   125    3e-26
gb|EF547367.1|  South African passiflora virus polyprotein gen...   117    8e-24
gb|DQ397527.1|  Cowpea aphid-borne mosaic virus isolate BA-Jgr...   109    2e-21
gb|S51666.1|  polyprotein [South African passiflora virus SAPV...  69.9    2e-09
dbj|D10053.1|SAPCPNIB  South African passiflora virus NIb and ...  69.9    2e-09
gb|L19473.1|BCMCOATB  Bean common mosaic virus (strain US5) co...  42.1    0.38 
ref|XM_001451429.1|  Paramecium tetraurelia hypothetical prote...  38.2    5.9  
gb|AC130609.2|  Oryza sativa Japonica Group chromosome 5 clone...  38.2    5.9  
dbj|AP008211.1|  Oryza sativa (japonica cultivar-group) genomi...  38.2    5.9  

ALIGNMENTS
>gb|DQ397525.1| Cowpea aphid-borne mosaic virus isolate MG-Avr coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  196 bits (99),  Expect = 1e-47
 Identities = 99/99 (100%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  958   TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  1017

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||||||||||||||||||||||||||||||||||||||
Sbjct  1018  ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1056


>gb|DQ397532.1| Cowpea aphid-borne mosaic virus isolate DF-Brs coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 95/99 (95%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  957   TACTTTAATTGAACTTAGCGGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTGT  1015

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  1016  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  1054


>gb|DQ397528.1| Cowpea aphid-borne mosaic virus isolate BA-Itb coat protein (CP) 
mRNA, partial cds
Length=1055

 Score =  157 bits (79),  Expect = 9e-36
 Identities = 95/99 (95%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  957   TACTTTAATTGAACTTAGCGGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTGT  1015

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  1016  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  1054


>gb|EU004070.2| Cowpea aphid-borne mosaic virus isolate Cr polyprotein gene, 
partial cds
Length=1516

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct  1418  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGACTGT  1476

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              || |||||||||||||||||||||||||||||||||||
Sbjct  1477  GTCCCGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1515


>gb|AY433950.1| Passion fruit woodiness virus strain PWV-SP coat protein mRNA, 
partial cds
Length=1076

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  958   TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGATTGT  1016

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||| |||||| |||||||| ||||||||||||||||||
Sbjct  1017  ATCATGCGTAGCTACCGAGACTTGTGTATGAAAACTCTC  1055


>gb|DQ397531.1| Cowpea aphid-borne mosaic virus isolate SP-Prp coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct  959   TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGACTGT  1017

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              ||||| ||||||||||||||||||||||||||||||||
Sbjct  1018  GTCACGTGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1056


>gb|DQ397529.1| Cowpea aphid-borne mosaic virus isolate ES-Vni coat protein (CP) 
mRNA, partial cds
Length=1056

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  958   TACTTAAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGATTGT  1016

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  1017  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  1055


>emb|Y17822.1|CMV17822 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain Monguno
Length=1254

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct  1150  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGGTTTT  1208

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | |||||||||||||||||||||||||||||||||||||
Sbjct  1209  ACCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1247


>emb|AJ132414.1|CAP132414 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein, partial, isolate Ibadan
Length=1161

 Score =  149 bits (75),  Expect = 2e-33
 Identities = 94/99 (94%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct  1058  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGGTTTT  1116

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | |||||||||||||||||||||||||||||||||||||
Sbjct  1117  ACCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1155


>gb|AF368424.1| Crotalaria mosaic potyvirus polyprotein gene, partial cds
Length=1703

 Score =  145 bits (73),  Expect = 4e-32
 Identities = 92/97 (94%), Gaps = 1/97 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct  1585  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGACTGT  1643

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTC  97
              ||||| ||||||||||||||||||||||||||||||
Sbjct  1644  GTCACGTGTAGTTACCGAGATTTGTGTATGAAAACTC  1680


>gb|AY433951.1| Passion fruit woodiness virus strain F-101 coat protein mRNA, 
partial cds
Length=1079

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 93/99 (93%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct  958   TACTTTAATTGAACTTAGCAGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTAT  1016

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||||||||||||||||||| ||||||||||| ||||||
Sbjct  1017  ATCACGCGTAGTTACCGAGACTTGTGTATGAAGACTCTC  1055


>gb|DQ397530.1| Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) 
mRNA, partial cds
Length=1057

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 92/99 (92%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct  958   TACTTTAATTGAACTTAGCGGAGAGGCCATAACCCCGGTTGGAGTGCTCAGAGTGAGTGT  1017

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||| |||||| ||||| || ||||||||||||||||||
Sbjct  1018  ATCATGCGTAGCTACCGTGACTTGTGTATGAAAACTCTC  1056


>gb|U90326.1|SIU90326 Sesame mosaic potyvirus polyprotein (CP) gene, partial cds
Length=1296

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 93/99 (93%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||
Sbjct  1198  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGGGTGACTGT  1256

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  1257  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  1295


>gb|AF241233.1|AF241233 Cowpea aphid-borne mosaic virus polyprotein gene, partial cds
Length=1299

 Score =  141 bits (71),  Expect = 5e-31
 Identities = 93/99 (93%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct  1201  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGAGTGACTGT  1259

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              ||||| ||||| ||||||||||||||||||||||||||
Sbjct  1260  GTCACGTGTAGTAACCGAGATTTGTGTATGAAAACTCTC  1298


>gb|AY434454.1| Passion fruit woodiness virus strain PWV-M3 coat protein gene, 
partial cds
Length=1055

 Score =  135 bits (68),  Expect = 3e-29
 Identities = 90/96 (93%), Gaps = 1/96 (1%)
 Strand=Plus/Plus

Query  4     TTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATC  63
             |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||
Sbjct  961   TTTAATTGAACTTAGCAGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATC  1019

Query  64    ACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | ||||||||||||||| ||||||||||||||||||
Sbjct  1020  ATGCGTAGTTACCGAGACTTGTGTATGAAAACTCTC  1055


>gb|AY433952.1| Passion fruit woodiness virus strain PWV-M2 coat protein mRNA, 
partial cds
Length=1055

 Score =  135 bits (68),  Expect = 3e-29
 Identities = 90/96 (93%), Gaps = 1/96 (1%)
 Strand=Plus/Plus

Query  4     TTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTATC  63
             |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||
Sbjct  961   TTTAATTGAACTTAGCAGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTATATC  1019

Query  64    ACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             ||||||||||||||||| ||||||||||| ||||||
Sbjct  1020  ACGCGTAGTTACCGAGACTTGTGTATGAAGACTCTC  1055


>gb|AY505342.1| Passion fruit woodiness virus strain F-144 polyprotein mRNA, 
partial cds
Length=1055

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct  958   TACTTTAATTGAACTTAGCAGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTAT  1016

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||||||||||||||||||| ||||||||| | ||||||
Sbjct  1017  ATCACGCGTAGTTACCGAGACTTGTGTATGGAGACTCTC  1055


>gb|DQ397526.1| Cowpea aphid-borne mosaic virus isolate PE-Bnt coat protein (CP) 
mRNA, partial cds
Length=1060

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 91/99 (91%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||
Sbjct  961   TACTTTAATTGAACTTAGCGGAGAGGCCATAACCCCGGTTTGAGTGCTCAGAGTGAGTGT  1020

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             |||| |||||| ||||| || ||||||||||||||||||
Sbjct  1021  ATCATGCGTAGCTACCGTGACTTGTGTATGAAAACTCTC  1059


>gb|AF348210.1| Cowpea aphid-borne mosaic virus polyprotein gene, complete cds
Length=9465

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  ||
Sbjct  9367  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGGGTGACCGT  9425

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  9426  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  9464


>emb|X82873.1|CABMVCOAT Cowpea aphid borne mosaic virus RNA for coat protein
Length=1221

 Score =  133 bits (67),  Expect = 1e-28
 Identities = 92/99 (92%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  ||
Sbjct  1123  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTTGGAGTGCTCAGGGTGACCGT  1181

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
              |||||||||| |||||||||||||||||||||||||||
Sbjct  1182  GTCACGCGTAGCTACCGAGATTTGTGTATGAAAACTCTC  1220


>emb|Y18634.1|CABM18634 Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion 
protein b and coat protein
Length=1140

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 91/99 (91%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| || |
Sbjct  1034  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTCGGAGTGCTCAGAGTGGTTCT  1092

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | || |||| |||||||||||||||||||||||||||||
Sbjct  1093  ACCATGCGTGGTTACCGAGATTTGTGTATGAAAACTCTC  1131


>emb|Y17824.1|CMV17824 Cowpea aphid-borne mosaic potyvirus cp gene and partial nuclear 
inclusion gene b, strain 70-12
Length=1107

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 91/99 (91%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| || |
Sbjct  1004  TACTTTAGTCGAACTTAGTGGAGAGGCCATA-CCCCGGTTGGAGTACTCAGAGTGGTTTT  1062

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | |||||||||| ||||||||||||||||||||||||||
Sbjct  1063  ACCACGCGTAGTCACCGAGATTTGTGTATGAAAACTCTC  1101


>gb|AF083558.1|AF083558 Cowpea aphid-borne mosaic virus NIb protein/coat protein mRNA, 
partial cds
Length=1121

 Score =  125 bits (63),  Expect = 3e-26
 Identities = 91/99 (91%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| || |
Sbjct  1022  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGGTCGGAGTGCTCAGAGTGGTTCT  1080

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | || |||| |||||||||||||||||||||||||||||
Sbjct  1081  ACCATGCGTGGTTACCGAGATTTGTGTATGAAAACTCTC  1119


>gb|EF547367.1| South African passiflora virus polyprotein gene, partial cds
Length=1676

 Score =  117 bits (59),  Expect = 8e-24
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGT  60
             ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||| || |
Sbjct  1571  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAGTGGTTTT  1629

Query  61    ATCACGCGTAGTTACCGAGATTTGTGTATGAAAACTCTC  99
             | || | ||||||||||||||||||||||||||||||||
Sbjct  1630  ACCATGTGTAGTTACCGAGATTTGTGTATGAAAACTCTC  1668


>gb|DQ397527.1| Cowpea aphid-borne mosaic virus isolate BA-Jgr coat protein (CP) 
mRNA, partial cds
Length=1054

 Score =  109 bits (55),  Expect = 2e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand=Plus/Plus

Query  3     CTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTGATTGTAT  62
             ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | 
Sbjct  961   CTTTAATTGAACTTAGCGGAGAGGCCAT-GCCCCGGTTGGAGTGCTCAGAGTGATTGAAA  1019

Query  63    CACGCGTAGTTACCGAGATTTGTGTATGAAAACTC  97
             | || |||| | |||||||| ||||||||||||||
Sbjct  1020  CCCGAGTAGCTTCCGAGATTAGTGTATGAAAACTC  1054


>gb|S51666.1| polyprotein [South African passiflora virus SAPV, Genomic RNA, 
1436 nt]
Length=1436

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTG  55
             ||||||||| ||||||||||||||||||||| ||||| | |||||||||||||||
Sbjct  1323  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAGTG  1376


>dbj|D10053.1|SAPCPNIB South African passiflora virus NIb and CP genes for polymerase 
and coat protein, partial cds
Length=1418

 Score = 69.9 bits (35),  Expect = 2e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand=Plus/Plus

Query  1     TACTTTAATCGAACTTAGCGGAGAGGCCATAGCCCCGGTTGGAGTGCTCAGAGTG  55
             ||||||||| ||||||||||||||||||||| ||||| | |||||||||||||||
Sbjct  1323  TACTTTAATTGAACTTAGCGGAGAGGCCATA-CCCCGATCGGAGTGCTCAGAGTG  1376


>gb|L19473.1|BCMCOATB Bean common mosaic virus (strain US5) coat protein gene, 3' end
Length=1127

 Score = 42.1 bits (21),  Expect = 0.38
 Identities = 21/21 (100%), Gaps = 0/21 (0%)
 Strand=Plus/Plus

Query  49    CAGAGTGATTGTATCACGCGT  69
             |||||||||||||||||||||
Sbjct  1074  CAGAGTGATTGTATCACGCGT  1094


>ref|XM_001451429.1| Paramecium tetraurelia hypothetical protein (GSPATT00018287001) 
partial mRNA
Length=8493

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Plus

Query  47    CTCAGAGTGATTGTATCAC  65
             |||||||||||||||||||
Sbjct  1181  CTCAGAGTGATTGTATCAC  1199


>gb|AC130609.2| Oryza sativa Japonica Group chromosome 5 clone P0048F12, complete 
sequence
Length=139627

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  76     CGAGATTTGTGTATGAAAA  94
              |||||||||||||||||||
Sbjct  46232  CGAGATTTGTGTATGAAAA  46214


>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 
5
Length=29737217

 Features in this part of subject sequence:
   Os05g0279900

 Score = 38.2 bits (19),  Expect = 5.9
 Identities = 19/19 (100%), Gaps = 0/19 (0%)
 Strand=Plus/Minus

Query  76        CGAGATTTGTGTATGAAAA  94
                 |||||||||||||||||||
Sbjct  11601797  CGAGATTTGTGTATGAAAA  11601779



  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 17, 2008  5:48 PM
  Number of letters in database: 1,790,623,125
  Number of sequences in database:  6,621,681

Lambda     K      H
    1.37    0.711     1.31 
Gapped
Lambda     K      H
    1.37    0.711     1.31 
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6621681
Number of Hits to DB: 1562571
Number of extensions: 66181
Number of successful extensions: 17347
Number of sequences better than 10: 1
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 17346
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 23265459605
Length adjustment: 21
Effective length of query: 78
Effective length of database: 23126404304
Effective search space: 1803859535712
Effective search space used: 1803859535712
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)





