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thetapi

PURPOSE

THETA_PI - Average number of nucleotide differences

SYNOPSIS

function [t,tvar] = thetapi(aln,jcflag,persite)

DESCRIPTION

THETA_PI - Average number of nucleotide differences

CROSS-REFERENCE INFORMATION

This function calls:

This function is called by:

estimatetheta ESTIMATETHETA - Estimate theta
fu97Fs FU97FS - Compute Fu's Fs statistic
fuli93dsfs_test FULI93DS - Fu and Li's D* and F* tests of neutrality
tajima89d_test TAJIMA89D_TEST - Tajima's Test of Neutrality

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