[BiO BB] COGs

[govind mk]

Hi

You could do a simple protein blast of 

COG regions -- >  in genome 1 with the other genome.
You could also subject both the genomes to domain
analysis and identify /compare domains.

Is there anything specific you are looking for ???

-Govind
--- "Tucker, James" <j.d.tucker at vla.defra.gsi.gov.uk>
wrote:
> Hi All,
> I'm looking in to regions of differences in 2
> genomes.
> In order to help me simplify and understand the
> information I'm looking at
> the COG groups that they fall into.
> However one of the Genomes does not have COGs
> details on the NCBI site.
> Can anyone tell me of an alternative  ?
> I've tried DDBJ but couldn't find any COG details.
> Thanks in advance for any help.
> Regards
> James
> 
> James Tucker
> Brucella Research Group
> Department of Bacterial Diseases
> VLA Weybridge
> Woodham Lane
> New Haw
> Addlestone
> Surrey
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> 
> Tel: ++44(0)1932 357227 / 359595
> Fax: ++44(0)1932 357873
> 
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> 
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