[BiO BB] how to search genes around certain SNP

[Khader Shameer]

Hi Paivi,

I have recently asked this question at http://biostar.stackechange.com .
I got an excellent answer for this (thx to Pierre) to get these via UCSC
public mysql db.
Check the question and answers here :
http://biostar.stackexchange.com/questions/413/how-to-map-a-snp-to-a-gene-around-60kb

Thanks,
Shameer Khader
Mayo Clinic, Rochester Campus


On Mon, Apr 12, 2010 at 3:15 AM, päivi siivola <pj.siivola at luukku.com>wrote:

> Hi!
>
> I would be interested to find out genes around spesific SNPs (genes which
> are ~ 1 MB away from SNP or less). What would be most efficient way to do
> this ?  Suggestions?
>
>
> Thanks in advance!
>
> Päivi Rosenström
>
> ....................................................................
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