[BiO BB] extracting mutation data from MSA

[Sudhindra Gadagkar]

MEGA5 gives you this information.

On Thursday, July 11, 2013, Dr. Achuthsankar S. Nair wrote:

> From file such as the one attached having an alignment in standard format
> (MSA), is there any tool that can fish out the nucleotide changes and their
> positions in some format like this:
> 1.G-A( 760),
> 2.A-G (1000)
> 3.C-T (9385)
>
>
>
> --
> *Dr Achuthsankar S Nair*  *ഡോ. അച്യുത് ശങ്കര്‍ എസ് നായര്‍
> *Head, Dept of Computational Biology and Bioinformatics
> University of Kerala, Trivandrum 695581, Kerala, INDIA
> Tel (O) 0471-2308759 (R) 0471-3192346/ 0471-2542220
>
> Personal Web Page    www.achu.keralauniversity.edu
> Dept Web page           dcb.keralauniversity.ac.in
>
> *GREEN TIP #2:* *Adopt a green charter for academic seminars and class room
> practices*
>