[Bio-linux-dev] Galaxy config

Tony Travis tony.travis at abdn.ac.uk
Wed Dec 3 09:35:38 EST 2014


On 03/12/14 14:06, Tim Booth wrote:
> Hi Tony,
>
> Sorry it took so long to reply to this.  Many things on my TODO list as
> usual.
>
> The answer is "possibly" since galaxy configuration is a bit of a mess,
> with some things allowing sub-configurations, some things being
> monolithic and others being hacked to allow migration to the Tool Shed.
> Basically, all your custom configs should be converted to shed modules
> and loaded via the Tool Shed mechanism, and if you don't want to do this
> there are ways around it but they are hacky.

Hi, Tim.

OK, I'll learn how to do it properly :-)

> The newest Galaxy brings in major changes and I don't have the time to
> get it working as a package just now, so I'm staying with the version I
> have for the duration of BL8, but of course I'll add fixes and
> security/stability patches.
>
> By the way, are you still operating as Minke Informatics?  The website
> is a dead link today, or at least an error code from the server.

Yes, I'm still operating as Minke Informatics but I've had to change my
ISP because the one I was using was impossible to communicate with and
had become very unreliable. My <tony-travis at minke-informatics.co.uk>
email is now working again, but I've not transferred my web pages yet.

Bye,

  Tony.

--
Dr. A.J.Travis, University of Aberdeen, Institute of Biological and
Environmental Sciences, Cruickshank Building, St. Machar Drive, Aberdeen
AB24 3UU, Scotland, UK. tel +44(0)1224 272700, fax +44 (0)1224 272 396
http://www.abdn.ac.uk, mailto:tony.travis at abdn.ac.uk, skype:ajtravis


The University of Aberdeen is a charity registered in Scotland, No SC013683.
Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683.



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