[BioBrew Users] Help with sge, scheduling dual cpu nodes?

[Humberto Ortiz-Zuazaga]

gotero at linuxprophet.com said:
> # qconf -sp mpi
> If it's $fill_up, it means that when you use the mpi pe, it will use
> up the slots on each node before moving on to the next available node.
> The default found in BioBrew is $round_robin. 

Yes, I had the default "allocation_rule   $round_robin", I've changed it to 
$fill_up, and it seems to work as advertised. Thanks. The documentation for 
sge is daunting.

I'm beginning to understand that most specification of behavior is done by 
modifying the queue properties, not the job properties.

-- 
Humberto Ortiz Zuazaga
Programmer-Archaeologist
High Performance Computing facility
University of Puerto Rico
http://www.hpcf.upr.edu/~humberto/


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