[Bioclusters] Re:s-s bridges

[aparna]

Hii....All,
             I am modelling a protein which is reported to play an 
important role in asthma!The problem with the protein is ..though 
its a 126 aa seq..it has 5 S-S bonds reported by the literature.No 
further reports as to where are they existing and how many are 
inter/intra...!
By homology modelling using MOdeller6v2 i could get a s-s build 
and 3 more cys are slightly far away to form s-s bridge.(template 
 from FSSP,as 3DPSSM template failed to get the cys closer 
atleast!)

Dear members, suggest  in this regard,

Thanks all,
Aparna

aparna.kg
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