Hi Borries, SeaView is the only "graphical multiple sequence alignment editor" I've had success with under *NIX. I don't know if it'll do EVERYTHING that you require but it's very easy to install and use: http://pbil.univ-lyon1.fr/software/seaview.html Give it a go. Affably Yours, Paul. On Fri, 7 Feb 2003, Borries Demeler wrote: >Sorry for this slightly off-topic question: > >I need to support a bioinformatics core facility where a lot of genomics >is done under Unix. To help with alignment display and editing, I am >looking for a graphical multiple sequence alignment editor for Unix/X >capable of the following features: > >* needs to be able to display hundreds of sequences >* shade by the degree of conservation >* shade by residue property (hydrophobic, acidic, etc...) >* various import formats desirable >* manually edit and save changes capabilities > >What is everyone using for these purposes, recommendations? > >Thanks a lot, -Borries >--- >Borries Demeler, Ph.D. >Assistant Professor >The University of Texas Health Science Center at San Antonio >Dept. of Biochemistry, 7703 Floyd Curl Drive, San Antonio, Texas 78229-3900 >Voice: 210-567-6592, Fax: 210-567-4575, Email: demeler@biochem.uthscsa.edu >_______________________________________________ >Bioclusters maillist - Bioclusters@bioinformatics.org >https://bioinformatics.org/mailman/listinfo/bioclusters > >