[Bioclusters] [mpiBLAST]how to "mpiformatdb nr"~~?THX~
kwLee
bioclusters@bioinformatics.org
Tue, 13 May 2003 10:32:11 +0800
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i think i have installed mpiblast already
i can use "mpiformatdb" to format yeast.nt database into same fragment
then use "mpiblast blastn" to search sequence
so i try "nr" database
i have formated nr database(use mpiformat)
but when i use "mpiblast blastp" to search
it says that "ERROR opening...nr.dbs"
i don't know why it has no nr.dbs
THX~
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<DIV><FONT size=3D2>i think i have installed mpiblast =
already</FONT></DIV>
<DIV>i can use "mpiformatdb" to format yeast.nt database into same=20
fragment</DIV>
<DIV>then use "mpiblast blastn" to search sequence</DIV>
<DIV>so i try "nr" database</DIV>
<DIV>i have formated nr database(use mpiformat)</DIV>
<DIV>but when i use "mpiblast blastp" to search</DIV>
<DIV>it says that "ERROR opening...nr.dbs"</DIV>
<DIV><FONT size=3D2>i don't know why it has no nr.dbs</FONT></DIV>
<DIV>THX~</DIV>
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