[Bioclusters] Need ur help badly

[Lewis, John]

Possible try running it from the tcsh shell.  That seems to do the 
trick for me some times...  But I have never setup mpiBLAST...   just 
type tcsh at the prompt.  if not to get back to your old shell just 
type sh at the tcsh prompt.

John
On Feb 17, 2004, at 8:55 PM, shalini sharon wrote:

>
> To : Tristan Gill
>
>     I 'm Sharon here.
>
>     I am very new to Bioinformatics. Therefore I thought maybe u might 
> be able to help me.
>     Is It possible if I can ask abt an error I faced while using 
> mpiBLAST-1.2.0?
>
>    This is the error i face. Do u know how to resolve it?
>
> root@bigcpu024 mpiBLAST-1.2.0]# make
> Making all in src
> make[1]: Entering directory `/usr/local/mpiBLAST-1.2.0/src'
> if mpiCC -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" 
> -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" 
> -DPACKAGE=\"mpiBLAST\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 
> -D_FILE_OFFSET_BITS=64 -DTIME_WITH_SYS_TIME=1  -I. -I. -I../include/ 
> -I/usr/local/ncbi/include/  -DUSING_MPI   -O2 
> -DINSTALL_PREFIX="\"/usr/local\"" -g -O2 -MT mpiblast-blastjob.o -MD 
> -MP -MF ".deps/mpiblast-blastjob.Tpo" \
> -c -o mpiblast-blastjob.o `test -f 'blastjob.cpp' || echo 
> './'`blastjob.cpp; \
> then mv ".deps/mpiblast-blastjob.Tpo" ".deps/mpiblast-blastjob.Po"; \
> else rm -f ".deps/mpiblast-blastjob.Tpo"; exit 1; \
> fi
> /bin/sh: line 1: mpiCC: command not found
>
> Rgds
> Sharon
> make[1]: *** [mpiblast-blastjob.o] Error 1
> make[1]: Leaving directory `/usr/local/mpiBLAST-1.2.0/src'
> make: *** [all-recursive] Error 1
>
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>
John F. Lewis III
www.danforthcenter.org
jlewis@danforthcenter.org
314-587-1028