The first volume of Nucleic Acid and research journal every year has a list of biology databases and updates. http://nar.oupjournals.org/ Ratna ___________________________ Ratna Saripalli * Tel: (509)-372-4185 * Fax: (509) 372-4995 * Email: Ratna.Saripalli@pnl.gov Battelle Pacific Northwest National Laboratory P.O. Box 999 / Mail Stop K6-04 Richland, WA 99352 -----Original Message----- From: Simon Twigger [mailto:simont@mcw.edu]=20 Sent: Monday, March 15, 2004 11:34 AM To: bioclusters@bioinformatics.org Cc: biodevelopers@bioinformatics.org Subject: [Biodevelopers] Re: [Bioclusters] RDBMS and Bioinformatics The Rat Genome Database runs off Oracle, I think Saccharomyces Genome=20 Database does too, Mouse Genome Database runs off Sybase I believe. At=20 RGD we also use MySQL for other tools and its a great platform. You=20 should also look at PostgreSQL which is the other leading open source=20 RDBMS - it has many of the features of a commercial package like Oracle=20 which MySQL might lack but is free and also has good support with third=20 party tools (db drivers, etc). The Generic Model Organism Database=20 project (GMOD, http://www.gmod.org) is using this for their RDBMS=20 platform instead of MySQL for many of these reasons. Simon. On Mar 15, 2004, at 11:30 AM, Dr. Hari Koduvely wrote: > Hi, I would like to know if RDBMS (Relational Data > Base Management Systems) is extensively used in Bioinformatics Data=20 > Bases. If it indeed true, what is the most suited RDBMS, Oracle? > > Regards > -Hari > > =3D=3D=3D=3D=3D > Dr. Hari Koduvely, Ph.D. > Research Scientist > Unilever Research India > 64 Main Road, Whitefield > Bangalore 560066, INDIA > Ph:+91 80 5139 5629 (Office) > +91 80 5221790 (Res) > -- Simon N. Twigger, Ph.D. Assistant Professor, Department of Physiology Medical College of Wisconsin 8701 Watertown Plank Road, Milwaukee, WI, USA tel: 414-456-8802 fax: 414-456-6595 _______________________________________________ Biodevelopers mailing list Biodevelopers@bioinformatics.org https://bioinformatics.org/mailman/listinfo/biodevelopers