[Biococoa-dev] bug alert

[Alexander Griekspoor]

Hi guys,

I've changed the stuff I discussed before, and described below. Please 
update your project from CVS, be careful when you have changes made 
since your last checkout. If you want to do a fresh checkout, don't 
forget the -P option to discard empty folders. Have a look if all works 
as it should. Just a nice thing to keep in mind for possible later use, 
renaming files is really easy in xcode, just right cick the file and 
rename it, XCode will handle the CVS synchronization for you. The only 
thing that then remains is a simple find and replace within the project 
to replace all old names with the new one...
Cheers,
Alex

> Ha Koen,
>
> First of all the newly added BCSequenceFactory.h file was still set to 
> project instead of private in a fresh checkout from the CVS.
> Next, I got a compile error that the BCFoundationDefines.h could not 
> be found. The by now famous, quit XCode, delete the build directory, 
> and reopen the project, helped however...
> After that everything seems to build and runs without problems Koen..
>
> Something else, in general the idea would be to add the BCTools prefix 
> to all tools, for instance:
> // BCTools
> #import <BioCocoa/BCToolMassCalculator.h>
> #import <BioCocoa/BCToolTranslatorDNA.h>
>
> I would like to propose to do the same for the following new ones:
> #import <BioCocoa/BCFindSequence.h>    ->  BCToolFindSequence (or even 
> BCToolSequenceFinder)
> #import <BioCocoa/BCSymbolCounter.h>   ->  BCToolSymbolCounter
> #import <BioCocoa/BCComplement.h>	   ->  BCToolComplement
> #import <BioCocoa/BCSequenceFactory.h> ->  BCToolSequenceFactory
>
> Similarly, lets stick to the guidelines and add the "shared" prefix to 
> all class methods that generate static objects, thus
> + sequenceFactory; -> + sharedSequenceFactory.
>
> Cheers,
> Alex

>>>
>> *********************************************************
>>                     ** Alexander Griekspoor **
>> *********************************************************
>>               The Netherlands Cancer Institute
>>               Department of Tumorbiology (H4)
>>          Plesmanlaan 121, 1066 CX, Amsterdam
>>                    Tel:  + 31 20 - 512 2023
>>                   Fax:  + 31 20 - 512 2029
>>                   AIM: mekentosj at mac.com
>>                  E-mail: a.griekspoor at nki.nl
>>               Web: http://www.mekentosj.com
>>
>>               4Peaks - For Peaks, Four Peaks.
>>        2004 Winner of the Apple Design Awards
>>                Best Mac OS X Student Product
>>              http://www.mekentosj.com/4peaks
>>
>> *********************************************************
>
>
>
**************************************************************
                         ** Alexander Griekspoor **
**************************************************************
                  The Netherlands Cancer Institute
                  Department of Tumorbiology (H4)
             Plesmanlaan 121, 1066 CX, Amsterdam
                        Tel:  + 31 20 - 512 2023
                        Fax:  + 31 20 - 512 2029
                       AIM: mekentosj at mac.com
                       E-mail: a.griekspoor at nki.nl
                    Web: http://www.mekentosj.com

MacOS X: The power of UNIX with the simplicity of the Mac

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