[Biococoa-dev] sequence wrappers

Alexander Griekspoor mek at mekentosj.com
Tue Dec 14 09:20:58 EST 2004


That's a good idea Koen, if the others agree feel free to implement 
that... I'm strongly in favour of the BCSymbolList (in analogy with the 
biojava framework). Another step closer to a single sequence class, 
haha ;-)
Alex

Op 14-dec-04 om 2:18 heeft Koen van der Drift het volgende geschreven:

> Hi,
>
> How about the following change in our class structure to accomodate 
> the sequence wrapper nomenclature:
>
> We create a new, bare sequence class, which only function is to 
> maintain an array of BCSymbols. A possible name is BCSimpleSequence or 
> BCSymbolList, or whatever. Part of the current code in BCSequence 
> could go in that class. Then we subclass that to BCSequence, which has 
> annotations and features. This is then subclassed to the current 
> subclasses. One advantage: no long ugly class names such as 
> BCSequenceProteinAnnotated, etc.
>
>
> cheers,
>
> - Koen.
>
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>
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                      ** Alexander Griekspoor **
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                The Netherlands Cancer Institute
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