[Biococoa-dev] RNA vs. DNA
Alexander Griekspoor
mek at mekentosj.com
Wed Sep 8 14:10:52 EDT 2004
> If I want to create the RNA equivalents of the symbol and sequence
> classes,
> is there anything I'd need to do aside from a find and replace with
> "uridine" for "thymidine" and "U" for "T"?
Yes, replace uracil for thymidine ;-)
> Are ambiguous bases also used
> for RNA?
I believe so, but if there's a 100% replacement for all T's for U's,
that I'm not 100% sure.
> The reason I'm asking is that I'm gradually realizing that formalizing
> the
> translation code would be easiest to do working with DNA and RNA in
> parallel, and from the BioCocoa perspective, RNA doesn't exist at the
> moment. Figure I might as well fix that omission.
It's certainly more than welcome! Great!
Cheers,
Alex
*********************************************************
** Alexander Griekspoor **
*********************************************************
The Netherlands Cancer Institute
Department of Tumorbiology (H4)
Plesmanlaan 121, 1066 CX, Amsterdam
Tel: + 31 20 - 512 2023
Fax: + 31 20 - 512 2029
AIM: mekentosj at mac.com
E-mail: a.griekspoor at nki.nl
Web: http://www.mekentosj.com
LabAssistant - Get your life organized!
http://www.mekentosj.com/labassistant
*********************************************************
More information about the Biococoa-dev
mailing list