[Biococoa-dev] Annotation

[Alexander Griekspoor]

Fine by me, but In that we have to check whether the current methods 
satisfy this condition (pointing at the subsequence methods for 
instance)...
Alex

On 23-feb-05, at 0:53, Koen van der Drift wrote:

>
> On Feb 22, 2005, at 6:00 AM, Alexander Griekspoor wrote:
>
>> - do we use 1 or 0 based ranges? For the first 10 bases, do I create 
>> a range {0,10} or {1,10}. I think it would be nicest to use NSRanges, 
>> we can compensate in the accessors if necessary I guess...
>>
>
> Whatever we do within the framework, I strongly suggest that we make 
> all sequence-accessors 1-based. This will be handy in many situations: 
> searching, aligning, digesting, etc.
>
> - Koen.
>
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*********************************************************
                     ** Alexander Griekspoor **
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               The Netherlands Cancer Institute
               Department of Tumorbiology (H4)
          Plesmanlaan 121, 1066 CX, Amsterdam
                    Tel:  + 31 20 - 512 2023
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*********************************************************
                     ** Alexander Griekspoor **
*********************************************************
               The Netherlands Cancer Institute
               Department of Tumorbiology (H4)
          Plesmanlaan 121, 1066 CX, Amsterdam
                   Tel:  + 31 20 - 512 2023
                   Fax:  + 31 20 - 512 2029
                   E-mail: a.griekspoor at nki.nl
	        AIM: mekentosj at mac.com
               Web: http://www.mekentosj.com

                  EnzymeX - To cut or not to cut
              http://www.mekentosj.com/enzymex

*********************************************************