[Biococoa-dev] file formats

Koen van der Drift kvddrift at earthlink.net
Sun Sep 23 09:39:29 EDT 2007


On Sep 21, 2007, at 2:42 PM, Scott Christley wrote:

>
> Can people send me small example sequence files in the various file  
> formats that BioCocoa supports, preferable a protein example and a  
> DNA example?  Or know where I can get some example files?  I would  
> like to fill out the tests for BCSequenceReader.  I have some of  
> the formats but others I am not familiar with.
>

Scott,

Check out this website for many formats: http:// 
emboss.sourceforge.net/docs/themes/SequenceFormats.html It doesn't  
cover the 'ncbi' format that we use in BioCocoa, a sample of that is  
here: http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html

- Koen.



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